Data search
Results for MligTC455_38386
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_38386 | 276 | 5.74 | Mlig455_019773 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.680/0.04858 |
PSMC3 | Mlig455_019773 {REF} {Length: 2330} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=141.5]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=53.2]; AAA+ lid domain [PF17862.3, score=46.2]; AAA ATPase domain [PF13191.8, score=27.8]; AAA domain (dynein-related subfamily) [PF07728.16, score=26.8]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=23.4]; AAA domain (Cdc48 subfamily) [PF07724.16, score=21.6]; AAA domain [PF13401.8, score=20.5]; Protein of unknown function (DUF815) [PF05673.15, score=18.1]} {Human: ENSG00000165916, PSMC3, proteasome 26S subunit, ATPase 3, [RH, Score=726, Expect=0.0]} {Mouse: ENSMUSG00000002102, Psmc3, proteasome (prosome, macropain) 26S subunit, ATPase 3, [RH, Score=727, Expect=0.0]} {Dmel: FBgn0028684, Rpt5, Regulatory particle triple-A ATPase 5, [RH, Score=726, Expect=0.0]} {Celegans: WBGene00004505, rpt-5, Proteasome Regulatory Particle, ATPase-like, [RH, Score=711, Expect=0.0]} {Smed: dd_Smed_v6_1855_0_1, dd_Smed_v6_1855_0_1, [RH, Score=741, Expect=0.0]} {RNA1509_11369} {RNA1310_10892, RNA1509_11369} {RNA1509_11369, RNA815_3190} |
Cumulative graph for MligTC455_38386
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.098 | 3.142 | 0.47491 | 1.00000 | |
| RegionR2 | -0.848 | 3.142 | 0.29400 | 0.68253 | |
| RegionR3 | -0.372 | 3.142 | 0.56822 | 1.00000 | |
| RegionR4 | 1.68 | 3.142 | 0.00737 | 0.04858 | |
| RegionR5 | 1.105 | 3.142 | 0.02276 | 0.10631 | |
| RegionR6 | -0.112 | 3.142 | 0.87413 | 1.00000 | |
| RegionR7 | -0.206 | 3.142 | 0.82513 | 1.00000 | |
| RegionR8 | -2.345 | 3.142 | 0.12566 | 0.65132 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.324 | 3.142 | 0.19084 | 0.93000 | |
| RegenerationR2 | 0.325 | 3.142 | 0.61028 | 0.91974 | |
| RegenerationR3 | 0.459 | 3.142 | 0.48761 | 0.85361 | |
| RegenerationR4 | -0.491 | 3.142 | 0.41197 | 0.82176 | |
| RegenerationR5 | 0.349 | 3.142 | 0.51071 | 0.86407 | |
| RegenerationR6 | 1.026 | 3.142 | 0.09351 | 0.38013 | |
| RegenerationBL | 2.1 | 3.142 | 0.01022 | 0.10226 | |
| RegenerationTP | 0.899 | 3.142 | 0.44855 | 0.86608 |
Genes with expression patterns similar to MligTC455_38386
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_38386 | 276 | 5.74 | Mlig455_019773 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.680/0.04858 |
PSMC3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_019773 {REF} {Length: 2330} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=141.5]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=53.2]; AAA+ lid domain [PF17862.3, score=46.2]; AAA ATPase domain [PF13191.8, score=27.8]; AAA domain (dynein-related subfamily) [PF07728.16, score=26.8]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=23.4]; AAA domain (Cdc48 subfamily) [PF07724.16, score=21.6]; AAA domain [PF13401.8, score=20.5]; Protein of unknown function (DUF815) [PF05673.15, score=18.1]} {Human: ENSG00000165916, PSMC3, proteasome 26S subunit, ATPase 3, [RH, Score=726, Expect=0.0]} {Mouse: ENSMUSG00000002102, Psmc3, proteasome (prosome, macropain) 26S subunit, ATPase 3, [RH, Score=727, Expect=0.0]} {Dmel: FBgn0028684, Rpt5, Regulatory particle triple-A ATPase 5, [RH, Score=726, Expect=0.0]} {Celegans: WBGene00004505, rpt-5, Proteasome Regulatory Particle, ATPase-like, [RH, Score=711, Expect=0.0]} {Smed: dd_Smed_v6_1855_0_1, dd_Smed_v6_1855_0_1, [RH, Score=741, Expect=0.0]} {RNA1509_11369} {RNA1310_10892, RNA1509_11369} {RNA1509_11369, RNA815_3190} |
| 2. | MligTC455_38385 | 240 | 4.99 | Mlig455_002351 | Neo: - Age: - Region-enriched R4: 1.868/0.04052 |
PSMC3 | 5.861 | 0.992 | 0.983 | 0.983 | 0.987 | 0.934 | 0.982 | Mlig455_002351 {REF} {Length: 1725} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=141.9]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=51.8]; AAA+ lid domain [PF17862.3, score=46.4]; AAA ATPase domain [PF13191.8, score=28.6]; AAA domain (dynein-related subfamily) [PF07728.16, score=27.8]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=24.2]; AAA domain (Cdc48 subfamily) [PF07724.16, score=21.5]; AAA domain [PF13401.8, score=21.3]; Protein of unknown function (DUF815) [PF05673.15, score=18.5]} {Human: ENSG00000165916, PSMC3, proteasome 26S subunit, ATPase 3, [Score=600, Expect=0.0]} {Mouse: ENSMUSG00000002102, Psmc3, proteasome (prosome, macropain) 26S subunit, ATPase 3, [Score=600, Expect=0.0]} {Dmel: FBgn0028684, Rpt5, Regulatory particle triple-A ATPase 5, [Score=601, Expect=0.0]} {Celegans: WBGene00004505, rpt-5, Proteasome Regulatory Particle, ATPase-like, [Score=599, Expect=0.0]} {Smed: dd_Smed_v6_1855_0_1, dd_Smed_v6_1855_0_1, [Score=615, Expect=0.0]} {RNA1509_11369} {RNA1310_10892} {RNA815_3190} |
| 3. | MligTC455_52897 | 152 | 3.18 | Mlig455_024542 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.837/0.04113 |
BARD1 | 1.768 | - | - | - | 0.799 | - | 0.969 | Mlig455_024542 {REF} {Length: 2496} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=86.2]; Ankyrin repeats (many copies) [PF13637.8, score=61.3]; Ankyrin repeat [PF00023.32, score=57.4]; Ankyrin repeat [PF13606.8, score=48.2]; Ankyrin repeats (many copies) [PF13857.8, score=46.6]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=39.0]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=32.1]; RING-type zinc-finger [PF13445.8, score=22.1]; Prokaryotic RING finger family 4 [PF14447.8, score=21.5]; Regulator of Ty1 transposition protein 107 BRCT domain [PF16770.7, score=21.1]; zinc finger of C3HC4-type, RING [PF15227.8, score=19.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=19.2]} {Human: ENSG00000138376, BARD1, BRCA1 associated RING domain 1, [RH, Score=218, Expect=2e-60]} {Mouse: ENSMUSG00000026196, Bard1, BRCA1 associated RING domain 1, [RH, Score=217, Expect=2e-60]} {Dmel: FBgn0036814, CG14073, [RH, Score=89.0, Expect=8e-18]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [Score=71.6, Expect=6e-13]} {Smed: dd_Smed_v6_9297_0_1, dd_Smed_v6_9297_0_1, [Score=103, Expect=8e-23]} {RNA1509_6999} {RNA1310_8348} {RNA815_2740} |
| 4. | MligTC455_17124 | 484 | 10.08 | Mlig455_002400, Mlig455_060153 | Neo: Irradiation Age: Down-Up-Up Region-enriched R4: 2.442/0.02922 |
NFYC | 0.972 | - | - | - | - | - | 0.972 | Mlig455_002400 {REF} {Length: 2095} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=53.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=39.9]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [Score=125, Expect=2e-32]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [Score=124, Expect=4e-33]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [Score=121, Expect=7e-31]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=104, Expect=9e-27]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=158, Expect=3e-46]} {RNA1509_28888} {RNA1310_21090.1, RNA1509_28888} {RNA1509_28888, RNA815_29133} Mlig455_060153 {REF} {Length: 2439} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=53.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=39.9]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [Score=125, Expect=2e-32]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [Score=124, Expect=4e-33]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [Score=121, Expect=7e-31]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=104, Expect=9e-27]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=158, Expect=3e-46]} {RNA1509_28888} {RNA1310_21090.1} {RNA815_29133} |
| 5. | MligTC455_08189 | 422 | 8.78 | Mlig455_055754 | Neo: - Age: - Region-enriched R5: 1.257/0.01328 |
0.971 | - | - | - | - | - | 0.971 | Mlig455_055754 {REF} {Length: 1152} {TRANSSPLICED} {RNA1509_44842} {RNA1310_31507.1, RNA1509_44842} {RNA1509_44842, RNA815_13475} | |
| 6. | MligTC455_53477 | 156 | 3.25 | Mlig455_044952 | Neo: Int S/G2/M Age: Up-Down-Up Region-enriched R4: 3.164/0.01936 |
0.971 | - | - | - | 0.971 | - | - | Mlig455_044952 {REF} {Length: 558} {TRANSSPLICED} {RNA1509_31514} {RNA1310_26227} {RNA815_13760} | |
| 7. | MligTC455_43677 | 15852 | 330.25 | Mlig455_038801, Mlig455_038817 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.008/0.00001 Regeneration-upregulated BL: 1.268 Regeneration-enriched BL: 1.268 |
CCT5 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_038801 {REF} {Length: 1943} {TRANSSPLICED} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=509.4]} {Human: ENSG00000150753, CCT5, chaperonin containing TCP1 subunit 5, [RH, Score=807, Expect=0.0]} {Mouse: ENSMUSG00000022234, Cct5, chaperonin containing Tcp1, subunit 5 (epsilon), [RH, Score=806, Expect=0.0]} {Dmel: FBgn0010621, CCT5, Chaperonin containing TCP1 subunit 5, [RH, Score=786, Expect=0.0]} {Celegans: WBGene00000380, cct-5, T-complex protein 1 subunit epsilon, [RH, Score=740, Expect=0.0]} {Smed: dd_Smed_v6_544_0_1, dd_Smed_v6_544_0_1, [RH, Score=845, Expect=0.0]} {RNA1509_4389} {RNA1310_11025} {RNA815_4101.1} Mlig455_038817 {REF} {Length: 2181} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=509.4]} {Human: ENSG00000150753, CCT5, chaperonin containing TCP1 subunit 5, [RH, Score=806, Expect=0.0]} {Mouse: ENSMUSG00000022234, Cct5, chaperonin containing Tcp1, subunit 5 (epsilon), [RH, Score=806, Expect=0.0]} {Dmel: FBgn0010621, CCT5, Chaperonin containing TCP1 subunit 5, [RH, Score=786, Expect=0.0]} {Celegans: WBGene00000380, cct-5, T-complex protein 1 subunit epsilon, [RH, Score=742, Expect=0.0]} {Smed: dd_Smed_v6_544_0_1, dd_Smed_v6_544_0_1, [RH, Score=845, Expect=0.0]} {RNA1509_4389, RNA1509_4706, RNA1509_5935, RNA1509_7478, RNA1509_7915} {RNA1310_11025, RNA1509_4706, RNA1509_5935, RNA1509_7478, RNA1509_7915} {RNA1509_4706, RNA1509_5935, RNA1509_7478, RNA1509_7915, RNA815_4101.1} |
| 8. | MligTC455_48552 | 184 | 3.84 | Mlig455_022765 | Neo: - Age: logFC(26M/2M)=0.271 Region-enriched R5: 1.403/0.03486 |
GTF2H4 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_022765 {REF} {Length: 2441} {TRANSSPLICED} {Pfam: Transcription factor Tfb2 [PF03849.16, score=310.2]; Transcription factor Tfb2 (p52) C-terminal domain [PF18307.3, score=76.3]} {Human: ENSG00000226384, GTF2H4, general transcription factor IIH subunit 4, [RH, Score=314, Expect=1e-101]; ENSG00000236895, GTF2H4, general transcription factor IIH subunit 4, [RH, Score=314, Expect=1e-101]; ENSG00000221974, GTF2H4, general transcription factor IIH subunit 4, [RH, Score=314, Expect=1e-101]; ENSG00000233149, GTF2H4, general transcription factor IIH subunit 4, [RH, Score=314, Expect=1e-101]; ENSG00000234370, GTF2H4, general transcription factor IIH subunit 4, [RH, Score=314, Expect=1e-101]; ENSG00000213780, GTF2H4, general transcription factor IIH subunit 4, [RH, Score=314, Expect=1e-101]} {Mouse: ENSMUSG00000001524, Gtf2h4, general transcription factor II H, polypeptide 4, [RH, Score=314, Expect=7e-102]} {Dmel: FBgn0261109, mrn, marionette, [RH, Score=306, Expect=1e-98]} {Celegans: WBGene00013529, Y73F8A.24, General transcription factor IIH subunit 4, [RH, Score=186, Expect=2e-53]} {Smed: dd_Smed_v6_11510_0_1, dd_Smed_v6_11510_0_1, [RH, Score=172, Expect=3e-48]} {RNA1509_23204, RNA1509_41750} {RNA1310_18685, RNA1509_23204, RNA1509_41750} {RNA1509_23204, RNA1509_41750, RNA815_72.1} |
| 9. | MligTC455_16029 | 143 | 2.99 | Mlig455_015088 | Neo: - Age: - |
CDK11B | 0.952 | - | - | - | - | - | 0.952 | Mlig455_015088 {REF} {Length: 6058} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=215.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=97.1]; BTB/POZ domain [PF00651.33, score=82.9]; Kinase-like [PF14531.8, score=22.5]; Peptidase family S64 [PF08192.13, score=17.6]} {Human: ENSG00000248333, CDK11B, cyclin dependent kinase 11B, [RH, Score=514, Expect=4e-165]; ENSG00000008128, CDK11A, cyclin dependent kinase 11A, [RH, Score=508, Expect=1e-162]} {Mouse: ENSMUSG00000029062, Cdk11b, cyclin-dependent kinase 11B, [RH, Score=512, Expect=2e-164]} {Dmel: FBgn0016696, Pitslre, [RH, Score=502, Expect=1e-158]} {Celegans: WBGene00015203, cdk-11.1, Putative serine/threonine-protein kinase B0495.2, [RH, Score=432, Expect=2e-135]} {Smed: dd_Smed_v6_3540_0_3, dd_Smed_v6_3540_0_3, [RH, Score=495, Expect=4e-159]} {RNA1509_23995} {RNA1310_10655} {RNA815_5865} |
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