Data search
Results for MligTC455_08189
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_08189 | 422 | 8.78 | Mlig455_055754 | Neo: - Age: - Region-enriched R5: 1.257/0.01328 |
Mlig455_055754 {REF} {Length: 1152} {TRANSSPLICED} {RNA1509_44842} {RNA1310_31507.1, RNA1509_44842} {RNA1509_44842, RNA815_13475} |
Cumulative graph for MligTC455_08189
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.08 | 3.572 | 0.95790 | 1.00000 | |
| RegionR2 | -0.586 | 3.572 | 0.32755 | 0.71953 | |
| RegionR3 | -0.715 | 3.572 | 0.17126 | 0.69720 | |
| RegionR4 | 1.107 | 3.572 | 0.03536 | 0.15244 | |
| RegionR5 | 1.257 | 3.572 | 0.00140 | 0.01328 | |
| RegionR6 | 0.117 | 3.572 | 0.80819 | 1.00000 | |
| RegionR7 | -0.794 | 3.572 | 0.29747 | 0.93254 | |
| RegionR8 | -0.305 | 3.572 | 0.73192 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.288 | 3.572 | 0.20974 | 0.94890 | |
| RegenerationR2 | -0.007 | 3.572 | 0.98918 | 1.00000 | |
| RegenerationR3 | 0.857 | 3.572 | 0.10620 | 0.51554 | |
| RegenerationR4 | -0.191 | 3.572 | 0.69240 | 0.95041 | |
| RegenerationR5 | -0.349 | 3.572 | 0.40614 | 0.80318 | |
| RegenerationR6 | 0.074 | 3.572 | 0.88766 | 1.00000 | |
| RegenerationBL | 1.345 | 3.572 | 0.02090 | 0.15667 | |
| RegenerationTP | 1.187 | 3.572 | 0.09198 | 0.47660 |
Genes with expression patterns similar to MligTC455_08189
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_08189 | 422 | 8.78 | Mlig455_055754 | Neo: - Age: - Region-enriched R5: 1.257/0.01328 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_055754 {REF} {Length: 1152} {TRANSSPLICED} {RNA1509_44842} {RNA1310_31507.1, RNA1509_44842} {RNA1509_44842, RNA815_13475} | |
| 2. | MligTC455_41228 | 892 | 18.59 | Mlig455_029646 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.317 Region-enriched R5: 1.550/0.00080 |
SAFB | 3.305 | 0.712 | - | 0.879 | 0.750 | - | 0.964 | Mlig455_029646 {REF} {Length: 2473} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=35.8]} {Human: ENSG00000160633, SAFB, scaffold attachment factor B, [Score=65.9, Expect=2e-10]} {Mouse: ENSMUSG00000071054, Safb, scaffold attachment factor B, [Score=61.6, Expect=2e-09]} {RNA1509_11846, RNA1509_41823} {RNA1310_8499, RNA1509_11846, RNA1509_41823} {RNA1509_11846, RNA1509_41823, RNA815_6853} |
| 3. | MligTC455_17124 | 484 | 10.08 | Mlig455_002400, Mlig455_060153 | Neo: Irradiation Age: Down-Up-Up Region-enriched R4: 2.442/0.02922 |
NFYC | 1.788 | - | - | 0.836 | - | - | 0.952 | Mlig455_002400 {REF} {Length: 2095} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=53.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=39.9]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [Score=125, Expect=2e-32]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [Score=124, Expect=4e-33]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [Score=121, Expect=7e-31]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=104, Expect=9e-27]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=158, Expect=3e-46]} {RNA1509_28888} {RNA1310_21090.1, RNA1509_28888} {RNA1509_28888, RNA815_29133} Mlig455_060153 {REF} {Length: 2439} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=53.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=39.9]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [Score=125, Expect=2e-32]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [Score=124, Expect=4e-33]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [Score=121, Expect=7e-31]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=104, Expect=9e-27]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=158, Expect=3e-46]} {RNA1509_28888} {RNA1310_21090.1} {RNA815_29133} |
| 4. | MligTC455_42090 | 625 | 13.03 | Mlig455_003814 | Neo: Int S/G2/M Age: Down-Down-Up Region-enriched R5: 1.603/0.00005 |
POLD2 | 1.752 | - | - | - | 0.791 | - | 0.961 | Mlig455_003814 {REF} {Length: 2103} {TRANSSPLICED} {Pfam: DNA polymerase alpha/epsilon subunit B [PF04042.18, score=147.9]; DNA polymerase delta subunit OB-fold domain [PF18018.3, score=132.3]} {Human: ENSG00000106628, POLD2, DNA polymerase delta 2, accessory subunit, [RH, Score=345, Expect=3e-114]} {Mouse: ENSMUSG00000020471, Pold2, polymerase (DNA directed), delta 2, regulatory subunit, [RH, Score=350, Expect=2e-116]} {Dmel: FBgn0027903, CG12018, [RH, Score=282, Expect=1e-90]} {Celegans: WBGene00008722, F12F6.7, Probable DNA polymerase delta small subunit, [RH, Score=161, Expect=2e-44]} {Smed: dd_Smed_v6_8399_0_1, dd_Smed_v6_8399_0_1, [RH, Score=244, Expect=8e-76]} {RNA1509_24914, RNA1509_35013} {RNA1310_19622.1, RNA1509_24914, RNA1509_35013} {RNA1509_24914, RNA1509_35013, RNA815_16200} |
| 5. | MligTC455_04160 | 657 | 13.7 | Mlig455_052970, Mlig455_053031 | Neo: - Age: - |
0.972 | - | - | - | - | - | 0.972 | Mlig455_052970 {REF} {Length: 1616} {TRANSSPLICED} {Pfam: DTW domain [PF03942.17, score=118.1]} {Mouse: ENSMUSG00000024505, Dtwd2, DTW domain containing 2, [RH, Score=124, Expect=9e-34]} {Dmel: FBgn0037492, CG10050, [RH, Score=162, Expect=2e-49]} {Smed: dd_Smed_v6_12942_0_1, dd_Smed_v6_12942_0_1, [RH, Score=160, Expect=9e-49]} {RNA1509_34162, RNA1509_43715, RNA1509_52175} {RNA1310_38151, RNA1509_34162, RNA1509_43715, RNA1509_52175} {RNA1509_34162, RNA1509_43715, RNA1509_52175, RNA815_21826} Mlig455_053031 {REF} {Length: 1775} {TRANSSPLICED} {Pfam: DTW domain [PF03942.17, score=118.2]} {Mouse: ENSMUSG00000024505, Dtwd2, DTW domain containing 2, [RH, Score=124, Expect=8e-34]} {Dmel: FBgn0037492, CG10050, [RH, Score=163, Expect=1e-49]} {Smed: dd_Smed_v6_12942_0_1, dd_Smed_v6_12942_0_1, [RH, Score=160, Expect=6e-49]} {RNA1509_34162, RNA1509_58371} {RNA1310_38151, RNA1509_58371} {RNA1509_58371, RNA815_21826} |
|
| 6. | MligTC455_38386 | 276 | 5.74 | Mlig455_019773 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.680/0.04858 |
PSMC3 | 0.971 | - | - | - | - | - | 0.971 | Mlig455_019773 {REF} {Length: 2330} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=141.5]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=53.2]; AAA+ lid domain [PF17862.3, score=46.2]; AAA ATPase domain [PF13191.8, score=27.8]; AAA domain (dynein-related subfamily) [PF07728.16, score=26.8]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=23.4]; AAA domain (Cdc48 subfamily) [PF07724.16, score=21.6]; AAA domain [PF13401.8, score=20.5]; Protein of unknown function (DUF815) [PF05673.15, score=18.1]} {Human: ENSG00000165916, PSMC3, proteasome 26S subunit, ATPase 3, [RH, Score=726, Expect=0.0]} {Mouse: ENSMUSG00000002102, Psmc3, proteasome (prosome, macropain) 26S subunit, ATPase 3, [RH, Score=727, Expect=0.0]} {Dmel: FBgn0028684, Rpt5, Regulatory particle triple-A ATPase 5, [RH, Score=726, Expect=0.0]} {Celegans: WBGene00004505, rpt-5, Proteasome Regulatory Particle, ATPase-like, [RH, Score=711, Expect=0.0]} {Smed: dd_Smed_v6_1855_0_1, dd_Smed_v6_1855_0_1, [RH, Score=741, Expect=0.0]} {RNA1509_11369} {RNA1310_10892, RNA1509_11369} {RNA1509_11369, RNA815_3190} |
| 7. | MligTC455_47889 | 2379 | 49.55 | Mlig455_001724 | Neo: Irradiation Age: Down-Up-Down |
PCYT2 | 0.971 | - | - | - | - | - | 0.971 | Mlig455_001724 {REF} {Length: 2684} {Pfam: Cytidylyltransferase-like [PF01467.28, score=161.4]; FAD synthetase [PF06574.14, score=22.7]} {Human: ENSG00000185813, PCYT2, phosphate cytidylyltransferase 2, ethanolamine, [RH, Score=453, Expect=3e-159]} {Mouse: ENSMUSG00000025137, Pcyt2, phosphate cytidylyltransferase 2, ethanolamine, [RH, Score=454, Expect=5e-160]} {Dmel: FBgn0032482, Pect, Phosphoethanolamine cytidylyltransferase, [RH, Score=445, Expect=1e-156]} {Celegans: WBGene00021352, Y37E3.11, [RH, Score=403, Expect=2e-140]} {Smed: dd_Smed_v6_3373_0_1, dd_Smed_v6_3373_0_1, [RH, Score=395, Expect=1e-137]} {RNA1509_17383, RNA1509_3108} {RNA1310_11318.1, RNA1509_17383, RNA1509_3108} {RNA1509_17383, RNA1509_3108, RNA815_4355.1} |
| 8. | MligTC455_19941 | 222 | 4.62 | Mlig455_045624 | Neo: - |
RNPS1 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_045624 {REF} {Length: 1207} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=47.0]} {Human: ENSG00000205937, RNPS1, RNA binding protein with serine rich domain 1, [RH, Score=119, Expect=8e-32]} {Mouse: ENSMUSG00000034681, Rnps1, ribonucleic acid binding protein S1, [RH, Score=119, Expect=8e-32]} {Dmel: FBgn0037707, RnpS1, RNA-binding protein S1, [RH, Score=94.0, Expect=5e-22]} {Celegans: WBGene00004388, rnp-5, RNP (RRM RNA binding domain) containing, [RH, Score=87.8, Expect=2e-20]} {Smed: dd_Smed_v6_1431_0_1, dd_Smed_v6_1431_0_1, [RH, Score=104, Expect=5e-26]} {RNA1509_14792} {RNA1310_28374} {RNA815_13087} |
| 9. | MligTC455_38385 | 240 | 4.99 | Mlig455_002351 | Neo: - Age: - Region-enriched R4: 1.868/0.04052 |
PSMC3 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_002351 {REF} {Length: 1725} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=141.9]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=51.8]; AAA+ lid domain [PF17862.3, score=46.4]; AAA ATPase domain [PF13191.8, score=28.6]; AAA domain (dynein-related subfamily) [PF07728.16, score=27.8]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=24.2]; AAA domain (Cdc48 subfamily) [PF07724.16, score=21.5]; AAA domain [PF13401.8, score=21.3]; Protein of unknown function (DUF815) [PF05673.15, score=18.5]} {Human: ENSG00000165916, PSMC3, proteasome 26S subunit, ATPase 3, [Score=600, Expect=0.0]} {Mouse: ENSMUSG00000002102, Psmc3, proteasome (prosome, macropain) 26S subunit, ATPase 3, [Score=600, Expect=0.0]} {Dmel: FBgn0028684, Rpt5, Regulatory particle triple-A ATPase 5, [Score=601, Expect=0.0]} {Celegans: WBGene00004505, rpt-5, Proteasome Regulatory Particle, ATPase-like, [Score=599, Expect=0.0]} {Smed: dd_Smed_v6_1855_0_1, dd_Smed_v6_1855_0_1, [Score=615, Expect=0.0]} {RNA1509_11369} {RNA1310_10892} {RNA815_3190} |
| 10. | MligTC455_20065 | 1482 | 30.87 | Mlig455_000221, Mlig455_058479 | Neo: - Age: Down-Up-Up |
PIGW | 0.961 | - | - | - | - | - | 0.961 | Mlig455_000221 {REF} {Length: 2066} {TRANSSPLICED} {Pfam: GWT1 [PF06423.14, score=72.6]} {Human: ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=79.0, Expect=1e-14]; ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=79.0, Expect=1e-14]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=100, Expect=1e-21]} {Dmel: FBgn0031422, PIG-Wa, Phosphatidylinositol glycan anchor biosynthesis class W a, [Score=115, Expect=4e-27]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=106, Expect=5e-24]} {Smed: dd_Smed_v6_14190_0_1, dd_Smed_v6_14190_0_1, [Score=120, Expect=6e-29]} {RNA1509_19464, RNA1509_29630} {RNA1310_6153, RNA1509_19464, RNA1509_29630} {RNA1509_19464, RNA1509_29630, RNA815_7740} Mlig455_058479 {REF} {Length: 2310} {Pfam: GWT1 [PF06423.14, score=70.1]} {Human: ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=74.3, Expect=2e-13]; ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=74.3, Expect=2e-13]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=96.7, Expect=1e-20]} {Dmel: FBgn0031422, PIG-Wa, Phosphatidylinositol glycan anchor biosynthesis class W a, [Score=113, Expect=2e-26]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=102, Expect=6e-23]} {Smed: dd_Smed_v6_14190_0_1, dd_Smed_v6_14190_0_1, [Score=119, Expect=1e-28]} {RNA1509_19464} {RNA1310_6153} {RNA815_7740} |
| 11. | MligTC455_19386 | 749 | 15.6 | Mlig455_002646 | Neo: - Age: - Region-enriched R5: 1.206/0.00084 |
0.958 | - | - | - | - | - | 0.958 | Mlig455_002646 {REF} {Length: 2208} {TRANSSPLICED} {Pfam: LicD family [PF04991.15, score=40.1]} {Smed: dd_Smed_v6_22425_0_1, dd_Smed_v6_22425_0_1, [RH, Score=86.7, Expect=2e-20]} {RNA1509_10983, RNA1509_45106, RNA1509_54854} {RNA1310_12379, RNA1509_10983, RNA1509_45106, RNA1509_54854} {RNA1509_10983, RNA1509_45106, RNA1509_54854, RNA815_6424.1} | |
| 12. | MligTC455_25124 | 192 | 4 | Mlig455_028759 | Neo: Irradiation Age: - |
TRIM2 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_028759 {REF} {Length: 5021} {Pfam: NHL repeat [PF01436.23, score=39.3]; RING-type zinc-finger [PF13445.8, score=18.7]} {Human: ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=57.0, Expect=1e-07]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=58.2, Expect=4e-08]} {Dmel: FBgn0265356, tn, thin, [Score=52.0, Expect=2e-06]} {Celegans: WBGene00003559, ncl-1, B-box type zinc finger protein ncl-1, [Score=85.9, Expect=5e-17]} {RNA1509_23913} {RNA1310_10840} {RNA815_6531} |
| 13. | MligTC455_46257 | 625 | 13.01 | Mlig455_033945 | Neo: - Age: - |
EXOC4 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_033945 {REF} {Length: 2851} {TRANSSPLICED} {Pfam: Sec8 exocyst complex component specific domain [PF04048.16, score=20.0]} {Human: ENSG00000131558, EXOC4, exocyst complex component 4, [RH, Score=167, Expect=5e-42]} {Mouse: ENSMUSG00000029763, Exoc4, exocyst complex component 4, [RH, Score=172, Expect=9e-44]} {Dmel: FBgn0266672, Sec8, Secretory 8, [RH, Score=141, Expect=3e-34]} {Smed: dd_Smed_v6_8308_0_1, dd_Smed_v6_8308_0_1, [RH, Score=106, Expect=3e-23]} {RNA1509_10631} {RNA1310_3681, RNA1509_10631} {RNA1509_10631, RNA815_12175} |
| 14. | MligTC455_07314 | 687 | 14.32 | Mlig455_000525 | Neo: Irradiation Age: - Region-enriched R5: 1.319/0.00385 |
SIN3B | 0.954 | - | - | - | - | - | 0.954 | Mlig455_000525 {REF} {Length: 4206} {TRANSSPLICED} {Pfam: C-terminal domain of Sin3a protein [PF16879.7, score=97.0]} {Human: ENSG00000127511, SIN3B, SIN3 transcription regulator family member B, [Score=186, Expect=1e-48]} {Mouse: ENSMUSG00000031622, Sin3b, transcriptional regulator, SIN3B (yeast), [Score=196, Expect=3e-52]} {Dmel: FBgn0022764, Sin3A, [Score=147, Expect=2e-36]} {Smed: dd_Smed_v6_7034_0_1, dd_Smed_v6_7034_0_1, [Score=97.4, Expect=9e-21]} {RNA1509_4899} {RNA1310_4266.2} {RNA815_1997} |
| 15. | MligTC455_07315 | 1412 | 29.41 | Mlig455_000426, Mlig455_024855 | Neo: - Age: - Region-enriched R5: 1.338/0.00399 |
SIN3A, SIN3B | 0.952 | - | - | - | - | - | 0.952 | Mlig455_000426 {REF} {Length: 2868} {Pfam: C-terminal domain of Sin3a protein [PF16879.7, score=98.6]} {Human: ENSG00000127511, SIN3B, SIN3 transcription regulator family member B, [Score=144, Expect=2e-35]; ENSG00000169375, SIN3A, SIN3 transcription regulator family member A, [Score=137, Expect=5e-33]} {Mouse: ENSMUSG00000031622, Sin3b, transcriptional regulator, SIN3B (yeast), [Score=160, Expect=2e-40]} {Dmel: FBgn0022764, Sin3A, [Score=108, Expect=4e-24]} {Smed: dd_Smed_v6_7034_0_1, dd_Smed_v6_7034_0_1, [Score=71.6, Expect=1e-12]} {RNA1509_4899} {RNA1310_3136.1} {RNA815_1997} Mlig455_024855 {REF} {Length: 6647} {Pfam: C-terminal domain of Sin3a protein [PF16879.7, score=79.7]; Bacterial protein of unknown function (DUF937) [PF06078.13, score=19.1]} {Human: ENSG00000169375, SIN3A, SIN3 transcription regulator family member A, [Score=110, Expect=3e-25]; ENSG00000127511, SIN3B, SIN3 transcription regulator family member B, [Score=107, Expect=4e-24]} {Mouse: ENSMUSG00000031622, Sin3b, transcriptional regulator, SIN3B (yeast), [Score=141, Expect=1e-35]} {Dmel: FBgn0022764, Sin3A, [Score=107, Expect=2e-24]} {Smed: dd_Smed_v6_7034_0_1, dd_Smed_v6_7034_0_1, [Score=67.8, Expect=6e-12]} {RNA1509_56147} {RNA1310_3136.1} {RNA815_14715} |
| 16. | MligTC455_35807 | 1184 | 24.66 | Mlig455_009564 | Neo: - Age: Up-Down-Up Region-enriched R4: 1.129/0.03429 |
PSMD5 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_009564 {REF} {Length: 1924} {TRANSSPLICED} {Pfam: Proteasome non-ATPase 26S subunit [PF10508.11, score=117.3]} {Human: ENSG00000095261, PSMD5, proteasome 26S subunit, non-ATPase 5, [RH, Score=114, Expect=1e-26]} {Mouse: ENSMUSG00000026869, Psmd5, proteasome (prosome, macropain) 26S subunit, non-ATPase, 5, [RH, Score=112, Expect=5e-26]} {Dmel: FBgn0030457, CG12096, [RH, Score=72.0, Expect=4e-13]} {RNA1509_22815, RNA1509_43760, RNA1509_58552} {RNA1310_15225, RNA1509_22815, RNA1509_43760, RNA1509_58552} {RNA1509_22815, RNA1509_43760, RNA1509_58552, RNA815_6007.1} |