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Results for MligTC455_40593

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_40593 7 0.14 Mlig455_069780

Neo: -

Age: Up-Down-Down

 Mlig455_069780 {REF} {Length: 1128} {TRANSSPLICED} {RNA1509_10472} {RNA1310_55432} {RNA815_50993}

Cumulative graph for MligTC455_40593

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_40593

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_40593 7 0.14 Mlig455_069780

Neo: -

Age: Up-Down-Down

 1 - - - - 1.000 - Mlig455_069780 {REF} {Length: 1128} {TRANSSPLICED} {RNA1509_10472} {RNA1310_55432} {RNA815_50993}
2. MligTC455_38619 6 0.12 Mlig455_035365

Neo: -

Age: Down-Down-Up

 RNF40 0.992 - - - - 0.992 - Mlig455_035365 {REF} {Length: 3524} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=25.8]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=21.1]; BRE1 E3 ubiquitin ligase [PF08647.13, score=19.6]; zinc-RING finger domain [PF14634.8, score=18.6]} {Human: ENSG00000103549, RNF40, ring finger protein 40, [RH, Score=488, Expect=3e-155]} {Mouse: ENSMUSG00000030816, Rnf40, ring finger protein 40, [RH, Score=494, Expect=7e-158]} {Dmel: FBgn0086694, Bre1, [RH, Score=527, Expect=6e-170]} {Celegans: WBGene00007008, rfp-1, E3 ubiquitin-protein ligase bre-1, [RH, Score=149, Expect=1e-36]} {Smed: dd_Smed_v6_4070_0_1, dd_Smed_v6_4070_0_1, [RH, Score=360, Expect=5e-109]} {RNA1509_18812} {RNA1310_3645} {RNA815_443}
3. MligTC455_21658 97 2.02 Mlig455_048689, Mlig455_048720

Neo: -

Age: -

 LMO1 0.982 - - - - 0.982 -

Mlig455_048689 {REF} {Length: 2106} {Pfam: LIM domain [PF00412.24, score=88.3]} {Human: ENSG00000166407, LMO1, LIM domain only 1, [RH, Score=184, Expect=1e-59]; ENSG00000048540, LMO3, LIM domain only 3, [RH, Score=181, Expect=2e-58]} {Mouse: ENSMUSG00000036111, Lmo1, LIM domain only 1, [RH, Score=181, Expect=1e-58]; ENSMUSG00000030226, Lmo3, LIM domain only 3, [RH, Score=180, Expect=2e-58]} {Dmel: FBgn0265598, Bx, Beadex, [RH, Score=196, Expect=4e-62]} {Celegans: WBGene00002987, lim-4, LIM domain family; Putative transcription factor LIM-4, [Score=79.3, Expect=8e-18]} {Smed: dd_Smed_v6_6263_0_1, dd_Smed_v6_6263_0_1, [RH, Score=139, Expect=3e-42]} {RNA1509_12583} {RNA1310_56294} {RNA815_40845}

Mlig455_048720 {REF} {Length: 2081} {Pfam: LIM domain [PF00412.24, score=90.0]} {Human: ENSG00000166407, LMO1, LIM domain only 1, [RH, Score=186, Expect=1e-60]; ENSG00000048540, LMO3, LIM domain only 3, [RH, Score=183, Expect=2e-59]} {Mouse: ENSMUSG00000036111, Lmo1, LIM domain only 1, [RH, Score=183, Expect=1e-59]; ENSMUSG00000030226, Lmo3, LIM domain only 3, [RH, Score=183, Expect=1e-59]} {Dmel: FBgn0265598, Bx, Beadex, [RH, Score=198, Expect=1e-62]} {Celegans: WBGene00002987, lim-4, LIM domain family; Putative transcription factor LIM-4, [Score=79.3, Expect=7e-18]} {Smed: dd_Smed_v6_17422_0_1, dd_Smed_v6_17422_0_1, [RH, Score=140, Expect=6e-42]} {RNA1310_56294} {RNA815_40845}
4. MligTC455_57381 8 0.16 Mlig455_058843

Neo: -

Age: -

 0.98 - - - - 0.980 - Mlig455_058843 {REF} {Length: 235} {NoTransDecoderORF}
5. MligTC455_40721 26 0.54 Mlig455_028262

Neo: -

Age: Down-Down-Down

 CHAF1A 0.975 - - - - 0.975 - Mlig455_028262 {REF} {Length: 324} {TRANSSPLICED} {Pfam: Chromatin assembly factor 1 subunit A [PF12253.10, score=88.9]} {Human: ENSG00000167670, CHAF1A, chromatin assembly factor 1 subunit A, [RH, Score=100, Expect=7e-22]} {Mouse: ENSMUSG00000002835, Chaf1a, chromatin assembly factor 1, subunit A (p150), [RH, Score=86.7, Expect=2e-17]} {Dmel: FBgn0030054, Caf1-180, Chromatin assembly factor 1, p180 subunit, [RH, Score=113, Expect=3e-26]} {Celegans: WBGene00011532, chaf-1, CHromatin Assembly Factor, [Score=62.4, Expect=3e-10]} {Smed: dd_Smed_v6_8919_0_1, dd_Smed_v6_8919_0_1, [RH, Score=99.8, Expect=3e-22]} {RNA1509_45107} {RNA1310_100948} {RNA815_65244}
6. MligTC455_24851 147 3.06 Mlig455_004279

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=3.694

 0.967 - - - - 0.967 - Mlig455_004279 {REF} {Length: 1264} {Pfam: TNF(Tumour Necrosis Factor) family [PF00229.20, score=31.9]} {RNA1310_34690.2} {RNA815_14830.1}
7. MligTC455_24903 12 0.24 Mlig455_047246

Neo: -

Age: -

 0.965 - - - - 0.965 - Mlig455_047246 {REF} {Length: 1995} {Pfam: Pet100 [PF09803.11, score=37.6]} {RNA1509_29287} {RNA1310_24026} {RNA815_16164.2}
8. MligTC455_07140 5 0.1 Mlig455_059010

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_059010 {REF} {Length: 347} {NoTransDecoderORF}
9. MligTC455_32299 21 0.43 Mlig455_045859, Mlig455_045877

Neo: -

Age: -

 0.962 - - - - 0.962 -

Mlig455_045859 {REF} {Length: 708} {NoTransDecoderORF} {RNA1509_50908} {RNA1310_71279} {RNA815_37583}

Mlig455_045877 {REF} {Length: 2155} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=37.1]} {Mouse: ENSMUSG00000022525, Hrasls, HRAS-like suppressor, [Score=45.8, Expect=6e-06]} {RNA1509_48906} {RNA1310_53397} {RNA815_41946}
10. MligTC455_25761 8 0.17 Mlig455_002214

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_002214 {REF} {Length: 2219} {RNA1509_23358} {RNA1310_81622} {RNA815_55072.1}
11. MligTC455_16660 27 0.55 Mlig455_056328

Neo: -

Age: -

 CENPA 0.958 - - - - 0.958 - Mlig455_056328 {REF} {Length: 2270} {TRANSSPLICED} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=81.8]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=21.1]} {Human: ENSG00000115163, CENPA, centromere protein A, [Score=80.5, Expect=3e-18]} {Mouse: ENSMUSG00000029177, Cenpa, centromere protein A, [Score=70.9, Expect=8e-15]} {Dmel: FBgn0040477, cid, centromere identifier, [RH, Score=73.2, Expect=4e-15]} {Celegans: WBGene00001946, his-72, Histone H3.3 type 2, [Score=64.3, Expect=1e-12]} {Smed: dd_Smed_v6_8630_0_1, dd_Smed_v6_8630_0_1, [Score=63.5, Expect=1e-12]} {RNA1509_27366} {RNA1310_29469, RNA1509_27366} {RNA1509_27366, RNA815_14172}
12. MligTC455_40379 65 1.35 Mlig455_008994

Neo: -

Age: -

 SVOP 0.956 - - - - 0.956 - Mlig455_008994 {REF} {Length: 4098} {TRANSSPLICED} {Pfam: Sugar (and other) transporter [PF00083.26, score=26.7]} {Human: ENSG00000166111, SVOP, SV2 related protein, [Score=96.3, Expect=2e-23]} {Mouse: ENSMUSG00000042078, Svop, SV2 related protein, [Score=87.8, Expect=1e-20]} {Dmel: FBgn0034956, CG4324, [Score=81.3, Expect=1e-18]} {Celegans: WBGene00014021, svop-1, Putative transporter svop-1, [Score=83.6, Expect=2e-19]} {Smed: dd_Smed_v6_3645_0_1, dd_Smed_v6_3645_0_1, [Score=81.6, Expect=6e-19]} {RNA1509_26220} {RNA1310_6321} {RNA815_6500}
13. MligTC455_18326 82 1.71 Mlig455_047740

Neo: Irradiation

Age: Up-Down-Down

 MED23 0.953 - - - - 0.953 - Mlig455_047740 {REF} {Length: 4844} {Pfam: Mediator complex subunit 23 [PF11573.10, score=275.4]} {Human: ENSG00000112282, MED23, mediator complex subunit 23, [RH, Score=174, Expect=4e-43]} {Mouse: ENSMUSG00000019984, Med23, mediator complex subunit 23, [RH, Score=167, Expect=3e-41]} {Dmel: FBgn0034795, MED23, Mediator complex subunit 23, [RH, Score=159, Expect=5e-39]} {Smed: dd_Smed_v6_8836_0_1, dd_Smed_v6_8836_0_1, [RH, Score=103, Expect=4e-22]} {RNA1509_13212} {RNA1310_1604} {RNA815_2253}
14. MligTC455_38733 112 2.34 Mlig455_004261

Neo: -

Age: Down-Up-Down

 BCKDHB 0.953 - - - - 0.953 - Mlig455_004261 {REF} {Length: 2212} {TRANSSPLICED} {Pfam: Transketolase, pyrimidine binding domain [PF02779.26, score=142.2]; Transketolase, C-terminal domain [PF02780.22, score=100.8]; Domain of unknown function DUF108 [PF01958.20, score=66.6]; Homoserine dehydrogenase, NAD binding domain [PF03447.18, score=50.6]} {Human: ENSG00000083123, BCKDHB, branched chain keto acid dehydrogenase E1 subunit beta, [Score=478, Expect=3e-165]} {Mouse: ENSMUSG00000032263, Bckdhb, branched chain ketoacid dehydrogenase E1, beta polypeptide, [Score=481, Expect=1e-166]} {Dmel: FBgn0039993, CG17691, [Score=419, Expect=1e-142]} {Celegans: WBGene00006518, bckd-1B, Branched Chain Keto acid Dehydrogenase e1 (E1) subunit, [Score=386, Expect=5e-130]} {Smed: dd_Smed_v6_2949_0_1, dd_Smed_v6_2949_0_1, [Score=410, Expect=3e-140]} {RNA1509_14939} {RNA1310_14019} {RNA815_14107}
15. MligTC455_15737 168 3.51 Mlig455_069550

Neo: -

Age: logFC(26M/2M)=0.762

 SGMS1 0.952 - - - - 0.952 - Mlig455_069550 {REF} {Length: 2417} {Pfam: PAP2 superfamily C-terminal [PF14360.8, score=83.5]} {Human: ENSG00000198964, SGMS1, sphingomyelin synthase 1, [RH, Score=210, Expect=1e-62]} {Mouse: ENSMUSG00000040451, Sgms1, sphingomyelin synthase 1, [RH, Score=207, Expect=1e-61]; ENSMUSG00000050931, Sgms2, sphingomyelin synthase 2, [RH, Score=201, Expect=5e-60]; ENSMUSG00000116143, Sgms2, sphingomyelin synthase 2, [RH, Score=201, Expect=5e-60]} {Dmel: FBgn0052380, SMSr, [RH, Score=171, Expect=1e-46]} {Celegans: WBGene00004892, sms-1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, [RH, Score=201, Expect=7e-59]} {Smed: dd_Smed_v6_11976_0_2, dd_Smed_v6_11976_0_2, [RH, Score=167, Expect=5e-47]} {RNA1509_21942} {RNA1310_9001} {RNA815_13690}

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