TomoSeq data search

Data search

Results for MligTC455_38792

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_38792

39

0.81

Mlig455_018807, Mlig455_029868

Neo: -

Age: -

RPN1

Mlig455_018807 {REF} {Length: 2985} {Pfam: Ribophorin I [PF04597.16, score=429.0]; DNA repair REX1-B [PF14966.8, score=27.1]} {Human: ENSG00000163902, RPN1, ribophorin I, [RH, Score=521, Expect=3e-179]} {Mouse: ENSMUSG00000030062, Rpn1, ribophorin I, [RH, Score=521, Expect=1e-179]} {Dmel: FBgn0053303, CG33303, [RH, Score=397, Expect=3e-133]} {Celegans: WBGene00020683, ribo-1, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1, [RH, Score=350, Expect=3e-113]} {Smed: dd_Smed_v6_853_0_1, dd_Smed_v6_853_0_1, [RH, Score=572, Expect=0.0]} {RNA1509_1279} {RNA1310_5963} {RNA815_1798.1}

Mlig455_029868 {REF} {Length: 355} {RNA1509_21181} {RNA1310_15650.2} {RNA815_22833}

Cumulative graph for MligTC455_38792

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	2.211	1.251	1.00000	1.00000
RegionR2	-1.963	1.251	0.99026	1.00000
RegionR3	-0.377	1.251	0.89011	1.00000
RegionR4	3.623	1.251	0.03854	0.16146
RegionR5	0.565	1.251	0.60347	0.96080
RegionR6	-0.369	1.251	0.89809	1.00000
RegionR7	0.04	1.251	0.85534	1.00000
RegionR8	-3.731	1.251	0.99960	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.242	1.251	0.99980	1.00000
RegenerationR2	0.561	1.251	0.54198	0.88909
RegenerationR3	-1.092	1.251	0.32123	0.74994
RegenerationR4	-1.211	1.251	0.26615	0.71365
RegenerationR5	-0.329	1.251	0.60219	0.91079
RegenerationR6	0.062	1.251	0.95108	1.00000
RegenerationBL	-2.673	1.251	1.00000	1.00000
RegenerationTP	-1.89	1.251	0.96799	1.00000

Genes with expression patterns similar to MligTC455_38792

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_38792	39	0.81	Mlig455_018807, Mlig455_029868	Neo: - Age: -	RPN1	3	-	-	-	1.000	1.000	1.000	Mlig455_018807 {REF} {Length: 2985} {Pfam: Ribophorin I [PF04597.16, score=429.0]; DNA repair REX1-B [PF14966.8, score=27.1]} {Human: ENSG00000163902, RPN1, ribophorin I, [RH, Score=521, Expect=3e-179]} {Mouse: ENSMUSG00000030062, Rpn1, ribophorin I, [RH, Score=521, Expect=1e-179]} {Dmel: FBgn0053303, CG33303, [RH, Score=397, Expect=3e-133]} {Celegans: WBGene00020683, ribo-1, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1, [RH, Score=350, Expect=3e-113]} {Smed: dd_Smed_v6_853_0_1, dd_Smed_v6_853_0_1, [RH, Score=572, Expect=0.0]} {RNA1509_1279} {RNA1310_5963} {RNA815_1798.1} Mlig455_029868 {REF} {Length: 355} {RNA1509_21181} {RNA1310_15650.2} {RNA815_22833}
2.	MligTC455_37365	43	0.9	Mlig455_018623	Neo: - Age: logFC(26M/2M)=1.793		2.829	-	-	-	0.926	0.999	0.904	Mlig455_018623 {REF} {Length: 776} {NoTransDecoderORF} {RNA1509_6435} {RNA1310_5963} {RNA815_1798.1}
3.	MligTC455_25719	165	3.44	Mlig455_004747	Neo: - Age: -	CHP1	0.986	-	-	-	-	0.986	-	Mlig455_004747 {REF} {Length: 2272} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=45.0]; EF-hand domain [PF13405.8, score=34.9]; EF hand [PF00036.34, score=28.8]; EF hand [PF13202.8, score=22.3]; EF-hand domain pair [PF13833.8, score=18.6]} {Human: ENSG00000187446, CHP1, calcineurin like EF-hand protein 1, [Score=122, Expect=2e-34]} {Mouse: ENSMUSG00000014077, Chp1, calcineurin-like EF hand protein 1, [RH, Score=123, Expect=5e-35]} {Dmel: FBgn0037358, elm, ethanol sensitive with low memory, [RH, Score=142, Expect=9e-43]} {Celegans: WBGene00014109, chpf-1, Calcineurin-like EF-Hand Protein Family member, [RH, Score=115, Expect=2e-32]} {Smed: dd_Smed_v6_1504_0_1, dd_Smed_v6_1504_0_1, [RH, Score=118, Expect=9e-34]} {RNA1509_12947} {RNA1310_50406} {RNA815_26406}
4.	MligTC455_32144	78	1.63	Mlig455_056452	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-1.687		0.979	-	-	-	-	-	0.979	Mlig455_056452 {REF} {Length: 1837} {TRANSSPLICED} {Smed: dd_Smed_v6_9974_1_8, dd_Smed_v6_9974_1_8, [Score=72.0, Expect=1e-15]} {RNA1509_31775} {RNA1310_15305} {RNA815_29.1}
5.	MligTC455_06741	156	3.25	Mlig455_001405, Mlig455_056658, Mlig455_064262, Mlig455_070036	Neo: - Age: -		0.971	-	-	-	-	0.971	-	Mlig455_001405 {REF} {Length: 203} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_55741} {RNA1310_25713} {RNA815_19630.1} Mlig455_056658 {REF} {Length: 355} {NoTransDecoderORF} {RNA1509_55741} {RNA1310_25713} {RNA815_19630.1} Mlig455_064262 {REF} {Length: 202} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_55741} {RNA1310_25713} {RNA815_19630.1} Mlig455_070036 {REF} {Length: 244} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_55741} {RNA1310_25713} {RNA815_19630.1}
6.	MligTC455_37904	30	0.62	Mlig455_020618	Neo: - Age: - Region-enriched R4: 3.412/0.02257		0.969	-	-	-	-	-	0.969	Mlig455_020618 {REF} {Length: 183} {NoTransDecoderORF} {RNA1310_48109} {RNA815_36337}
7.	MligTC455_21429	18	0.37	Mlig455_049174	Neo: - Age: -		0.968	-	-	-	-	0.968	-	Mlig455_049174 {REF} {Length: 2613} {NoTransDecoderORF} {RNA1310_50381} {RNA815_39191}
8.	MligTC455_53574	349	7.28	Mlig455_000870	Neo: - Age: -	TMEM184C	0.966	-	-	-	-	0.966	-	Mlig455_000870 {REF} {Length: 3063} {Pfam: Organic solute transporter Ostalpha [PF03619.18, score=300.2]} {Human: ENSG00000164168, TMEM184C, transmembrane protein 184C, [RH, Score=417, Expect=6e-143]} {Mouse: ENSMUSG00000031617, Tmem184c, transmembrane protein 184C, [RH, Score=402, Expect=1e-134]} {Dmel: FBgn0032172, CG5850, [RH, Score=367, Expect=5e-123]} {Celegans: WBGene00009574, F40E10.6, [Score=183, Expect=4e-53]} {Smed: dd_Smed_v6_3881_1_1, dd_Smed_v6_3881_1_1, [Score=159, Expect=1e-44]} {RNA1509_50063} {RNA1310_31961, RNA1509_50063} {RNA1509_50063, RNA815_7530.1}
9.	MligTC455_30697	65	1.35	Mlig455_061109	Neo: - Age: logFC(26M/2M)=0.757		0.96	-	-	-	-	-	0.960	Mlig455_061109 {REF} {Length: 2730} {Pfam: Fibronectin type III domain [PF00041.23, score=104.5]} {RNA1509_47722} {RNA1310_18059, RNA1509_47722} {RNA1509_47722, RNA815_718.1}
10.	MligTC455_26289	103	2.15	Mlig455_031915	Neo: - Age: Up-Down-Down Region-enriched R2: 3.261/0.04331		0.958	-	-	-	-	0.958	-	Mlig455_031915 {REF} {Length: 3995} {Pfam: Elongation factor G C-terminus [PF00679.26, score=37.7]} {RNA1509_50100} {RNA1310_17404.1} {RNA815_5685.2}
11.	MligTC455_17399	133	2.78	Mlig455_001172	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.765		0.957	-	-	-	0.957	-	-	Mlig455_001172 {REF} {Length: 3270} {TRANSSPLICED} {RNA1509_55944} {RNA1310_7230} {RNA815_15379}
12.	MligTC455_22104	54	1.12	Mlig455_018878	Neo: - Age: -	RTL1	0.957	-	-	-	-	-	0.957	Mlig455_018878 {REF} {Length: 3742} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=121.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=79.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.3]; Integrase core domain [PF00665.28, score=28.2]; Integrase core domain [PF13683.8, score=20.8]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=101, Expect=3e-21]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=88.6, Expect=2e-17]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=88.6, Expect=2e-17]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=228, Expect=7e-66]} {RNA1509_36857} {RNA1310_23998} {RNA815_6067.1}
13.	MligTC455_12745	82	1.71	Mlig455_027479	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.603	PRXL2C	0.956	-	-	-	-	0.956	-	Mlig455_027479 {REF} {Length: 2497} {Pfam: AhpC/TSA antioxidant enzyme [PF13911.8, score=35.1]; AhpC/TSA family [PF00578.23, score=27.1]; Redoxin [PF08534.12, score=25.1]} {Human: ENSG00000158122, PRXL2C, peroxiredoxin like 2C, [RH, Score=137, Expect=1e-39]} {Mouse: ENSMUSG00000021482, Aaed1, AhpC/TSA antioxidant enzyme domain containing 1, [RH, Score=134, Expect=1e-38]} {Smed: dd_Smed_v6_4424_0_1, dd_Smed_v6_4424_0_1, [Score=135, Expect=2e-39]} {RNA1509_42365} {RNA1310_38096, RNA1509_42365} {RNA1509_42365, RNA815_19477}
14.	MligTC455_03341	78	1.62	Mlig455_065359	Neo: - Age: Up-Down-Up		0.955	-	-	-	-	0.955	-	Mlig455_065359 {REF} {Length: 2340} {TRANSSPLICED} {RNA1509_28552} {RNA1310_15555} {RNA815_4371}
15.	MligTC455_49644	38	0.79	Mlig455_027199	Neo: Int S/G2/M Age: -		0.955	-	-	-	-	0.955	-	Mlig455_027199 {REF} {Length: 2902} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=44.2]} {RNA1509_25402} {RNA1310_45818.1} {RNA815_14744.1}
16.	MligTC455_09481	52	1.08	Mlig455_030866	Neo: - Age: -	TLX3	0.954	-	-	-	-	0.954	-	Mlig455_030866 {REF} {Length: 1143} {Pfam: Homeodomain [PF00046.31, score=72.0]} {Human: ENSG00000164438, TLX3, T cell leukemia homeobox 3, [RH, Score=172, Expect=3e-51]; ENSG00000107807, TLX1, T cell leukemia homeobox 1, [RH, Score=166, Expect=7e-49]} {Mouse: ENSMUSG00000040610, Tlx3, T cell leukemia, homeobox 3, [RH, Score=172, Expect=2e-51]; ENSMUSG00000025215, Tlx1, T cell leukemia, homeobox 1, [RH, Score=166, Expect=5e-49]} {Dmel: FBgn0004863, C15, [RH, Score=174, Expect=8e-52]} {Celegans: WBGene00000434, ceh-9, Homeobox protein ceh-9, [Score=84.0, Expect=8e-20]} {Smed: dd_Smed_v6_13781_0_1, dd_Smed_v6_13781_0_1, [RH, Score=183, Expect=3e-57]} {RNA1310_112071}
17.	MligTC455_53814	76	1.59	Mlig455_013605	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_013605 {REF} {Length: 467} {NoTransDecoderORF} {RNA1509_22316} {RNA1310_77656}
18.	MligTC455_41633	245	5.09	Mlig455_039532	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_039532 {REF} {Length: 419} {NoTransDecoderORF} {RNA1509_33706} {RNA1310_107559} {RNA815_55368}
19.	MligTC455_33721	238	4.96	Mlig455_023625	Neo: - Age: -	INPP4A	0.95	-	-	-	-	0.950	-	Mlig455_023625 {REF} {Length: 3731} {TRANSSPLICED} {Pfam: PH domain [PF00169.31, score=23.2]} {Human: ENSG00000040933, INPP4A, inositol polyphosphate-4-phosphatase type I A, [RH, Score=160, Expect=9e-40]; ENSG00000109452, INPP4B, inositol polyphosphate-4-phosphatase type II B, [RH, Score=154, Expect=7e-38]} {Mouse: ENSMUSG00000026113, Inpp4a, inositol polyphosphate-4-phosphatase, type I, [RH, Score=160, Expect=6e-40]; ENSMUSG00000037940, Inpp4b, inositol polyphosphate-4-phosphatase, type II, [RH, Score=154, Expect=8e-38]} {Dmel: FBgn0259166, CG42271, [RH, Score=130, Expect=2e-30]} {Celegans: WBGene00010975, R01H10.7, Inositol polyphosphate-4-phosphatase, [RH, Score=99.4, Expect=6e-21]} {Smed: dd_Smed_v6_3999_0_1, dd_Smed_v6_3999_0_1, [RH, Score=273, Expect=1e-77]} {RNA1509_35733} {RNA1310_133.2} {RNA815_856}

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