Data search
Results for MligTC455_39273
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39273 | 5 | 0.10 | Mlig455_045504 | Neo: - Age: - |
Mlig455_045504 {REF} {Length: 1320} {RNA1310_84541} |
Cumulative graph for MligTC455_39273
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_39273
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39273 | 5 | 0.1 | Mlig455_045504 | Neo: - Age: - |
1 | - | - | - | - | - | 1.000 | Mlig455_045504 {REF} {Length: 1320} {RNA1310_84541} | |
| 2. | MligTC455_39274 | 6 | 0.12 | Mlig455_065105 | Neo: - Age: - |
0.973 | - | - | - | - | - | 0.973 | Mlig455_065105 {REF} {Length: 1433} {RNA1310_84541} | |
| 3. | MligTC455_13395 | 18 | 0.38 | Mlig455_061750 | Neo: - Age: - |
QRFPR | 0.966 | - | - | - | - | - | 0.966 | Mlig455_061750 {REF} {Length: 1579} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=107.1]} {Human: ENSG00000186867, QRFPR, pyroglutamylated RFamide peptide receptor, [Score=99.8, Expect=2e-22]} {Mouse: ENSMUSG00000035528, Npffr2, neuropeptide FF receptor 2, [Score=92.8, Expect=2e-20]} {Dmel: FBgn0050106, CCHa1-R, CCHamide-1 receptor, [Score=78.6, Expect=1e-15]} {Celegans: WBGene00021983, npr-5, NeuroPeptide Receptor family, [Score=77.4, Expect=2e-15]} {Smed: dd_Smed_v6_14520_0_1, dd_Smed_v6_14520_0_1, [Score=73.9, Expect=2e-14]} {RNA1310_103173} {RNA815_39338} |
| 4. | MligTC455_00532 | 2 | 0.04 | Mlig455_014540 | Neo: - Age: - |
0.963 | - | - | - | - | - | 0.963 | Mlig455_014540 {REF} {Length: 58} {NoTransDecoderORF} | |
| 5. | MligTC455_33184 | 31 | 0.65 | Mlig455_053155 | Neo: - Age: logFC(26M/2M)=-0.436 |
ANK2 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_053155 {REF} {Length: 5350} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=295.9]; Ankyrin repeat [PF00023.32, score=260.6]; Ankyrin repeats (many copies) [PF13857.8, score=219.4]; Ankyrin repeats (many copies) [PF13637.8, score=209.0]; Ankyrin repeat [PF13606.8, score=187.8]; Mab-21 protein [PF03281.16, score=27.5]; PEGA domain [PF08308.13, score=27.5]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=255, Expect=9e-69]; ENSG00000029534, ANK1, ankyrin 1, [Score=254, Expect=2e-68]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=252, Expect=1e-67]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=249, Expect=8e-67]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=241, Expect=3e-64]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=235, Expect=2e-66]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=243, Expect=3e-65]} {Smed: dd_Smed_v6_2072_0_30, dd_Smed_v6_2072_0_30, [Score=229, Expect=3e-62]} {RNA1509_19838, RNA1509_39807} {RNA1310_3403, RNA1509_39807} {RNA1509_39807, RNA815_1217} |
| 6. | MligTC455_23045 | 15 | 0.32 | Mlig455_010924 | Neo: - Age: - |
FERD3L | 0.955 | - | - | - | - | - | 0.955 | Mlig455_010924 {REF} {Length: 1552} {TRANSSPLICED} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=39.0]} {Human: ENSG00000146618, FERD3L, Fer3 like bHLH transcription factor, [Score=77.8, Expect=5e-17]} {Mouse: ENSMUSG00000046518, Ferd3l, Fer3 like bHLH transcription factor, [Score=80.1, Expect=4e-18]} {Dmel: FBgn0037937, Fer3, 48 related 3, [Score=65.1, Expect=2e-12]} {Celegans: WBGene00003018, lin-32, [Score=49.7, Expect=2e-07]} {Smed: dd_Smed_v6_8096_0_1, dd_Smed_v6_8096_0_1, [Score=75.5, Expect=3e-16]} {RNA1310_121570} |
| 7. | MligTC455_09452 | 19 | 0.4 | Mlig455_040643 | Neo: - Age: Down-Up-Down |
ANKRD28 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_040643 {REF} {Length: 4360} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=58.1]; Ankyrin repeat [PF13606.8, score=42.0]; Ankyrin repeat [PF00023.32, score=35.6]; Ankyrin repeats (many copies) [PF13637.8, score=30.8]; Ankyrin repeats (many copies) [PF13857.8, score=29.0]} {Human: ENSG00000206560, ANKRD28, ankyrin repeat domain 28, [Score=58.9, Expect=8e-09]} {Mouse: ENSMUSG00000014496, Ankrd28, ankyrin repeat domain 28, [Score=58.9, Expect=5e-09]; ENSMUSG00000078487, Ankrd65, ankyrin repeat domain 65, [Score=58.5, Expect=5e-09]} {Dmel: FBgn0041096, rols, rolling pebbles, [Score=63.5, Expect=1e-10]} {Smed: dd_Smed_v6_6779_0_1, dd_Smed_v6_6779_0_1, [Score=53.5, Expect=1e-07]} {RNA1509_42830} {RNA1310_48342, RNA1509_42830} {RNA1509_42830, RNA815_30933} |
Berezikov Lab - 2020-2021 © ERIBA