TomoSeq data search

Data search

Results for MligTC455_39536

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_39536	2251	46.90	Mlig455_008794, Mlig455_008925	Neo: - Age: -	TPM1, TPM2	Mlig455_008794 {REF} {Length: 3744} {Pfam: Tropomyosin [PF00261.22, score=52.0]; Tropomyosin like [PF12718.9, score=40.0]; Spc19 [PF08287.13, score=25.6]} {Human: ENSG00000198467, TPM2, tropomyosin 2, [Score=57.4, Expect=2e-08]; ENSG00000143549, TPM3, tropomyosin 3, [Score=56.6, Expect=3e-08]; ENSG00000140416, TPM1, tropomyosin 1, [Score=54.7, Expect=1e-07]} {Mouse: ENSMUSG00000058126, Tpm3-rs7, tropomyosin 3, related sequence 7, [Score=57.0, Expect=1e-08]; ENSMUSG00000027940, Tpm3, tropomyosin 3, gamma, [Score=56.2, Expect=2e-08]; ENSMUSG00000028464, Tpm2, tropomyosin 2, beta, [Score=55.5, Expect=5e-08]} {Dmel: FBgn0003721, Tm1, Tropomyosin 1, [Score=86.7, Expect=1e-17]} {Smed: dd_Smed_v6_405_0_1, dd_Smed_v6_405_0_1, [Score=64.3, Expect=3e-11]} {RNA1509_15131} {RNA1310_18171} {RNA815_7914.1} Mlig455_008925 {REF} {Length: 4710} {Pfam: Tropomyosin [PF00261.22, score=185.7]; Tropomyosin like [PF12718.9, score=53.7]; Spc19 [PF08287.13, score=24.0]} {Human: ENSG00000140416, TPM1, tropomyosin 1, [Score=120, Expect=3e-30]; ENSG00000143549, TPM3, tropomyosin 3, [Score=117, Expect=4e-29]} {Mouse: ENSMUSG00000027940, Tpm3, tropomyosin 3, gamma, [Score=121, Expect=1e-30]; ENSMUSG00000032366, Tpm1, tropomyosin 1, alpha, [Score=118, Expect=1e-29]; ENSMUSG00000031799, Tpm4, tropomyosin 4, [Score=115, Expect=2e-28]} {Dmel: FBgn0003721, Tm1, Tropomyosin 1, [Score=154, Expect=2e-39]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=140, Expect=1e-37]} {Smed: dd_Smed_v6_436_0_1, dd_Smed_v6_436_0_1, [Score=142, Expect=2e-38]} {RNA1509_15131} {RNA1310_18171} {RNA815_13599}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_39536

2251

46.90

Mlig455_008794, Mlig455_008925

Neo: -

Age: -

TPM1, TPM2

Mlig455_008794 {REF} {Length: 3744} {Pfam: Tropomyosin [PF00261.22, score=52.0]; Tropomyosin like [PF12718.9, score=40.0]; Spc19 [PF08287.13, score=25.6]} {Human: ENSG00000198467, TPM2, tropomyosin 2, [Score=57.4, Expect=2e-08]; ENSG00000143549, TPM3, tropomyosin 3, [Score=56.6, Expect=3e-08]; ENSG00000140416, TPM1, tropomyosin 1, [Score=54.7, Expect=1e-07]} {Mouse: ENSMUSG00000058126, Tpm3-rs7, tropomyosin 3, related sequence 7, [Score=57.0, Expect=1e-08]; ENSMUSG00000027940, Tpm3, tropomyosin 3, gamma, [Score=56.2, Expect=2e-08]; ENSMUSG00000028464, Tpm2, tropomyosin 2, beta, [Score=55.5, Expect=5e-08]} {Dmel: FBgn0003721, Tm1, Tropomyosin 1, [Score=86.7, Expect=1e-17]} {Smed: dd_Smed_v6_405_0_1, dd_Smed_v6_405_0_1, [Score=64.3, Expect=3e-11]} {RNA1509_15131} {RNA1310_18171} {RNA815_7914.1}

Mlig455_008925 {REF} {Length: 4710} {Pfam: Tropomyosin [PF00261.22, score=185.7]; Tropomyosin like [PF12718.9, score=53.7]; Spc19 [PF08287.13, score=24.0]} {Human: ENSG00000140416, TPM1, tropomyosin 1, [Score=120, Expect=3e-30]; ENSG00000143549, TPM3, tropomyosin 3, [Score=117, Expect=4e-29]} {Mouse: ENSMUSG00000027940, Tpm3, tropomyosin 3, gamma, [Score=121, Expect=1e-30]; ENSMUSG00000032366, Tpm1, tropomyosin 1, alpha, [Score=118, Expect=1e-29]; ENSMUSG00000031799, Tpm4, tropomyosin 4, [Score=115, Expect=2e-28]} {Dmel: FBgn0003721, Tm1, Tropomyosin 1, [Score=154, Expect=2e-39]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=140, Expect=1e-37]} {Smed: dd_Smed_v6_436_0_1, dd_Smed_v6_436_0_1, [Score=142, Expect=2e-38]} {RNA1509_15131} {RNA1310_18171} {RNA815_13599}

Cumulative graph for MligTC455_39536

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.275	5.747	0.14038	0.74843
RegionR2	0.125	5.747	0.74337	1.00000
RegionR3	0.538	5.747	0.07711	0.49151
RegionR4	0.366	5.747	0.32544	0.64322
RegionR5	-0.043	5.747	0.88848	1.00000
RegionR6	0.922	5.747	0.00222	0.06507
RegionR7	-0.601	5.747	0.12910	0.67606
RegionR8	-0.031	5.747	0.94147	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-7.258	5.747	0.06367	0.73891
RegenerationR2	0.152	5.747	0.65654	0.93930
RegenerationR3	0.1	5.747	0.78326	0.97659
RegenerationR4	0.388	5.747	0.30891	0.74957
RegenerationR5	0.527	5.747	0.13928	0.55118
RegenerationR6	0.373	5.747	0.29469	0.64526
RegenerationBL	1.031	5.747	0.00283	0.04516
RegenerationTP	0.395	5.747	0.34506	0.78741

Genes with expression patterns similar to MligTC455_39536

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_39536	2251	46.9	Mlig455_008794, Mlig455_008925	Neo: - Age: -	TPM1, TPM2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_008794 {REF} {Length: 3744} {Pfam: Tropomyosin [PF00261.22, score=52.0]; Tropomyosin like [PF12718.9, score=40.0]; Spc19 [PF08287.13, score=25.6]} {Human: ENSG00000198467, TPM2, tropomyosin 2, [Score=57.4, Expect=2e-08]; ENSG00000143549, TPM3, tropomyosin 3, [Score=56.6, Expect=3e-08]; ENSG00000140416, TPM1, tropomyosin 1, [Score=54.7, Expect=1e-07]} {Mouse: ENSMUSG00000058126, Tpm3-rs7, tropomyosin 3, related sequence 7, [Score=57.0, Expect=1e-08]; ENSMUSG00000027940, Tpm3, tropomyosin 3, gamma, [Score=56.2, Expect=2e-08]; ENSMUSG00000028464, Tpm2, tropomyosin 2, beta, [Score=55.5, Expect=5e-08]} {Dmel: FBgn0003721, Tm1, Tropomyosin 1, [Score=86.7, Expect=1e-17]} {Smed: dd_Smed_v6_405_0_1, dd_Smed_v6_405_0_1, [Score=64.3, Expect=3e-11]} {RNA1509_15131} {RNA1310_18171} {RNA815_7914.1} Mlig455_008925 {REF} {Length: 4710} {Pfam: Tropomyosin [PF00261.22, score=185.7]; Tropomyosin like [PF12718.9, score=53.7]; Spc19 [PF08287.13, score=24.0]} {Human: ENSG00000140416, TPM1, tropomyosin 1, [Score=120, Expect=3e-30]; ENSG00000143549, TPM3, tropomyosin 3, [Score=117, Expect=4e-29]} {Mouse: ENSMUSG00000027940, Tpm3, tropomyosin 3, gamma, [Score=121, Expect=1e-30]; ENSMUSG00000032366, Tpm1, tropomyosin 1, alpha, [Score=118, Expect=1e-29]; ENSMUSG00000031799, Tpm4, tropomyosin 4, [Score=115, Expect=2e-28]} {Dmel: FBgn0003721, Tm1, Tropomyosin 1, [Score=154, Expect=2e-39]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=140, Expect=1e-37]} {Smed: dd_Smed_v6_436_0_1, dd_Smed_v6_436_0_1, [Score=142, Expect=2e-38]} {RNA1509_15131} {RNA1310_18171} {RNA815_13599}
2.	MligTC455_27746	2246	46.8	Mlig455_026528	Neo: - Age: -	USP43	0.952	-	-	-	0.952	-	-	Mlig455_026528 {REF} {Length: 4903} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=211.4]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=52.3]} {Human: ENSG00000154914, USP43, ubiquitin specific peptidase 43, [RH, Score=285, Expect=3e-80]} {Mouse: ENSMUSG00000020905, Usp43, ubiquitin specific peptidase 43, [RH, Score=287, Expect=3e-81]; ENSMUSG00000063317, Usp31, ubiquitin specific peptidase 31, [RH, Score=273, Expect=1e-75]} {Dmel: FBgn0050421, Usp15-31, Ubiquitin specific protease 15/31, [RH, Score=248, Expect=2e-67]} {Celegans: WBGene00019259, H34C03.2, Ubiquitin carboxyl-terminal hydrolase, [Score=111, Expect=8e-25]} {Smed: dd_Smed_v6_9753_0_1, dd_Smed_v6_9753_0_1, [RH, Score=219, Expect=1e-58]} {RNA1509_1499, RNA1509_24777, RNA1509_29215, RNA1509_30622, RNA1509_31713, RNA1509_60143} {RNA1310_1291, RNA1509_1499, RNA1509_24777, RNA1509_29215, RNA1509_30622, RNA1509_31713, RNA1509_60143} {RNA1509_1499, RNA1509_24777, RNA1509_29215, RNA1509_30622, RNA1509_31713, RNA1509_60143, RNA815_779.1}
3.	MligTC455_51681	762	15.87	Mlig455_009904	Neo: - Age: - Regeneration-upregulated BL: 1.809 Regeneration-enriched BL: 1.809	YBX3	0.95	-	-	-	0.950	-	-	Mlig455_009904 {REF} {Length: 3925} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=92.6]} {Human: ENSG00000060138, YBX3, Y-box binding protein 3, [RH, Score=161, Expect=2e-47]; ENSG00000065978, YBX1, Y-box binding protein 1, [RH, Score=157, Expect=2e-45]; ENSG00000006047, YBX2, Y-box binding protein 2, [RH, Score=153, Expect=2e-43]} {Mouse: ENSMUSG00000030189, Ybx3, Y box protein 3, [RH, Score=162, Expect=8e-48]; ENSMUSG00000028639, Ybx1, Y box protein 1, [RH, Score=157, Expect=1e-45]} {Dmel: FBgn0022959, yps, ypsilon schachtel, [RH, Score=154, Expect=2e-44]} {Celegans: WBGene00000472, cey-1, C. Elegans Y-box, [RH, Score=146, Expect=4e-43]} {Smed: dd_Smed_v6_25570_0_1, dd_Smed_v6_25570_0_1, [Score=162, Expect=1e-47]} {RNA1509_14234, RNA1509_43002} {RNA1310_16756, RNA1509_14234} {RNA1509_14234, RNA815_19171.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_39536

2251

46.9

Mlig455_008794, Mlig455_008925

Neo: -

Age: -

TPM1, TPM2

1.000

MligTC455_27746

2246

46.8

Mlig455_026528

Neo: -

Age: -

USP43

0.952

Mlig455_026528 {REF} {Length: 4903} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=211.4]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=52.3]} {Human: ENSG00000154914, USP43, ubiquitin specific peptidase 43, [RH, Score=285, Expect=3e-80]} {Mouse: ENSMUSG00000020905, Usp43, ubiquitin specific peptidase 43, [RH, Score=287, Expect=3e-81]; ENSMUSG00000063317, Usp31, ubiquitin specific peptidase 31, [RH, Score=273, Expect=1e-75]} {Dmel: FBgn0050421, Usp15-31, Ubiquitin specific protease 15/31, [RH, Score=248, Expect=2e-67]} {Celegans: WBGene00019259, H34C03.2, Ubiquitin carboxyl-terminal hydrolase, [Score=111, Expect=8e-25]} {Smed: dd_Smed_v6_9753_0_1, dd_Smed_v6_9753_0_1, [RH, Score=219, Expect=1e-58]} {RNA1509_1499, RNA1509_24777, RNA1509_29215, RNA1509_30622, RNA1509_31713, RNA1509_60143} {RNA1310_1291, RNA1509_1499, RNA1509_24777, RNA1509_29215, RNA1509_30622, RNA1509_31713, RNA1509_60143} {RNA1509_1499, RNA1509_24777, RNA1509_29215, RNA1509_30622, RNA1509_31713, RNA1509_60143, RNA815_779.1}

MligTC455_51681

762

15.87

Mlig455_009904

Neo: -

Age: -

Regeneration-upregulated BL: 1.809

Regeneration-enriched BL: 1.809

YBX3

0.95

0.950

Mlig455_009904 {REF} {Length: 3925} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=92.6]} {Human: ENSG00000060138, YBX3, Y-box binding protein 3, [RH, Score=161, Expect=2e-47]; ENSG00000065978, YBX1, Y-box binding protein 1, [RH, Score=157, Expect=2e-45]; ENSG00000006047, YBX2, Y-box binding protein 2, [RH, Score=153, Expect=2e-43]} {Mouse: ENSMUSG00000030189, Ybx3, Y box protein 3, [RH, Score=162, Expect=8e-48]; ENSMUSG00000028639, Ybx1, Y box protein 1, [RH, Score=157, Expect=1e-45]} {Dmel: FBgn0022959, yps, ypsilon schachtel, [RH, Score=154, Expect=2e-44]} {Celegans: WBGene00000472, cey-1, C. Elegans Y-box, [RH, Score=146, Expect=4e-43]} {Smed: dd_Smed_v6_25570_0_1, dd_Smed_v6_25570_0_1, [Score=162, Expect=1e-47]} {RNA1509_14234, RNA1509_43002} {RNA1310_16756, RNA1509_14234} {RNA1509_14234, RNA815_19171.1}