TomoSeq data search

Data search

Results for MligTC455_39678

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_39678

1206

25.13

Mlig455_044223

Neo: -

Age: -

Mlig455_044223 {REF} {Length: 2705} {TRANSSPLICED} {RNA1509_4626} {RNA1310_6681, RNA1509_4626} {RNA1509_4626, RNA815_2257}

Cumulative graph for MligTC455_39678

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.314	4.892	0.69000	1.00000
RegionR2	0.186	4.892	0.60629	0.95528
RegionR3	-0.431	4.892	0.14688	0.65166
RegionR4	-0.494	4.892	0.15273	0.40457
RegionR5	0.09	4.892	0.72431	1.00000
RegionR6	0.109	4.892	0.70664	1.00000
RegionR7	-0.246	4.892	0.54735	1.00000
RegionR8	0.472	4.892	0.32337	0.95667

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-8.379	4.892	0.00972	0.44061
RegenerationR2	0.414	4.892	0.15763	0.59456
RegenerationR3	0.471	4.892	0.16348	0.59827
RegenerationR4	0.267	4.892	0.42650	0.82881
RegenerationR5	0.429	4.892	0.15242	0.57122
RegenerationR6	-0.171	4.892	0.60505	0.87118
RegenerationBL	0.775	4.892	0.03093	0.19640
RegenerationTP	-0.427	4.892	0.34695	0.78850

Genes with expression patterns similar to MligTC455_39678

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_39678	1206	25.13	Mlig455_044223	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_044223 {REF} {Length: 2705} {TRANSSPLICED} {RNA1509_4626} {RNA1310_6681, RNA1509_4626} {RNA1509_4626, RNA815_2257}
2.	MligTC455_35293	7275	151.56	Mlig455_045265, Mlig455_069184	Neo: - Age: -	RNF13	1.759	-	-	-	-	0.959	0.800	Mlig455_045265 {REF} {Length: 1734} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=48.4]; RING-like zinc finger [PF17123.7, score=45.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=35.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=30.9]; RING-H2 zinc finger domain [PF12678.9, score=30.3]; PA domain [PF02225.24, score=29.2]; RING-type zinc-finger [PF13445.8, score=28.9]; zinc-RING finger domain [PF14634.8, score=28.9]; Prokaryotic RING finger family 4 [PF14447.8, score=24.3]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=19.1]} {Human: ENSG00000082996, RNF13, ring finger protein 13, [Score=168, Expect=4e-48]} {Mouse: ENSMUSG00000036503, Rnf13, ring finger protein 13, [Score=168, Expect=2e-48]} {Dmel: FBgn0037442, godzilla, godzilla E3 ubiquitin protein ligase, [Score=149, Expect=7e-40]} {Celegans: WBGene00007666, C18B12.4, [Score=125, Expect=4e-32]} {Smed: dd_Smed_v6_5532_0_1, dd_Smed_v6_5532_0_1, [Score=79.7, Expect=4e-16]} {RNA1509_5463} {RNA1310_16699} {RNA815_6639} Mlig455_069184 {REF} {Length: 1671} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=48.4]; RING-like zinc finger [PF17123.7, score=45.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=35.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=30.9]; RING-H2 zinc finger domain [PF12678.9, score=30.3]; PA domain [PF02225.24, score=29.2]; RING-type zinc-finger [PF13445.8, score=28.9]; zinc-RING finger domain [PF14634.8, score=28.9]; Prokaryotic RING finger family 4 [PF14447.8, score=24.3]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=19.1]} {Human: ENSG00000082996, RNF13, ring finger protein 13, [Score=168, Expect=4e-48]} {Mouse: ENSMUSG00000036503, Rnf13, ring finger protein 13, [Score=168, Expect=3e-48]} {Dmel: FBgn0037442, godzilla, godzilla E3 ubiquitin protein ligase, [Score=147, Expect=3e-39]} {Celegans: WBGene00007666, C18B12.4, [Score=126, Expect=2e-32]} {Smed: dd_Smed_v6_5532_0_1, dd_Smed_v6_5532_0_1, [Score=79.3, Expect=4e-16]} {RNA1509_17947, RNA1509_42298, RNA1509_5463} {RNA1310_16699, RNA1509_17947, RNA1509_42298} {RNA1509_17947, RNA1509_42298, RNA815_6639}
3.	MligTC455_24467	276	5.74	Mlig455_038848, Mlig455_063787	Neo: - Age: -	FSTL5	1.66	-	-	-	0.703	0.957	-	Mlig455_038848 {REF} {Length: 4365} {Pfam: Immunoglobulin domain [PF13927.8, score=60.0]; Immunoglobulin I-set domain [PF07679.18, score=47.4]; Immunoglobulin domain [PF13895.8, score=35.5]; Kazal-type serine protease inhibitor domain [PF07648.17, score=31.7]; Immunoglobulin domain [PF00047.27, score=25.6]} {Human: ENSG00000168843, FSTL5, follistatin like 5, [RH, Score=137, Expect=1e-32]} {Mouse: ENSMUSG00000034098, Fstl5, follistatin-like 5, [RH, Score=137, Expect=1e-32]} {Dmel: FBgn0033159, Dscam1, Down syndrome cell adhesion molecule 1, [Score=68.2, Expect=3e-11]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=56.6, Expect=9e-08]} {RNA1509_42343} {RNA1310_5125} {RNA815_7561} Mlig455_063787 {REF} {Length: 403} {TRANSSPLICED} {Pfam: Kazal-type serine protease inhibitor domain [PF07648.17, score=36.4]} {Human: ENSG00000168843, FSTL5, follistatin like 5, [Score=53.5, Expect=4e-09]} {Mouse: ENSMUSG00000034098, Fstl5, follistatin-like 5, [Score=50.1, Expect=4e-08]} {RNA1509_42343} {RNA1310_74379} {RNA815_33925}
4.	MligTC455_43042	497	10.35	Mlig455_036805, Mlig455_052941	Neo: - Age: Down-Down-Up Region-enriched R3: 2.713/0.03378		0.974	-	-	-	-	0.974	-	Mlig455_036805 {REF} {Length: 3140} {RNA1509_10620} {RNA1310_36955, RNA1509_10620} {RNA1509_10620, RNA815_22686} Mlig455_052941 {REF} {Length: 2371} {RNA1509_10620} {RNA1310_36955} {RNA815_22686}
5.	MligTC455_22160	711	14.82	Mlig455_062184	Neo: - Age: -	KDELC1	0.95	-	-	-	-	0.950	-	Mlig455_062184 {REF} {Length: 2268} {TRANSSPLICED} {Pfam: Glycosyl transferase family 90 [PF05686.14, score=265.7]; Glycosyl transferases group 1 [PF13524.8, score=19.4]} {Human: ENSG00000134901, KDELC1, KDEL motif containing 1, [RH, Score=372, Expect=7e-124]; ENSG00000178202, KDELC2, KDEL motif containing 2, [RH, Score=358, Expect=3e-118]} {Mouse: ENSMUSG00000026047, Kdelc1, KDEL (Lys-Asp-Glu-Leu) containing 1, [RH, Score=378, Expect=3e-126]} {Dmel: FBgn0051139, CG31139, [Score=122, Expect=7e-31]} {RNA1509_13357} {RNA1310_9092.1, RNA1509_13357} {RNA1509_13357, RNA815_3755.1}

Berezikov Lab - 2020-2021 © ERIBA