Data search
Results for MligTC455_39708
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39708 | 428 | 8.91 | Mlig455_037474, Mlig455_044499 | Neo: - Age: - Region-enriched R4: 3.201/0.00580 |
LIMD1 | Mlig455_037474 {REF} {Length: 2250} {Pfam: LIM domain [PF00412.24, score=93.6]} {Human: ENSG00000144791, LIMD1, LIM domains containing 1, [RH, Score=236, Expect=3e-70]; ENSG00000142279, WTIP, WT1 interacting protein, [RH, Score=229, Expect=1e-69]} {Mouse: ENSMUSG00000025239, Limd1, LIM domains containing 1, [RH, Score=237, Expect=2e-70]; ENSMUSG00000036459, Wtip, WT1-interacting protein, [RH, Score=230, Expect=9e-71]} {Dmel: FBgn0030530, jub, Ajuba LIM protein, [RH, Score=238, Expect=2e-70]} {Celegans: WBGene00006999, zyx-1, Zyxin, [RH, Score=159, Expect=2e-42]} {Smed: dd_Smed_v6_9489_0_2, dd_Smed_v6_9489_0_2, [RH, Score=209, Expect=1e-62]} {RNA1509_31264} {RNA1310_14704.1} {RNA815_28506.1} Mlig455_044499 {REF} {Length: 3868} {Pfam: LIM domain [PF00412.24, score=93.4]; Protein of unknown function (DUF2722) [PF10846.10, score=27.4]} {Human: ENSG00000144791, LIMD1, LIM domains containing 1, [RH, Score=239, Expect=3e-71]; ENSG00000142279, WTIP, WT1 interacting protein, [RH, Score=231, Expect=2e-70]} {Mouse: ENSMUSG00000025239, Limd1, LIM domains containing 1, [RH, Score=239, Expect=2e-71]; ENSMUSG00000036459, Wtip, WT1-interacting protein, [RH, Score=233, Expect=8e-72]} {Dmel: FBgn0030530, jub, Ajuba LIM protein, [RH, Score=239, Expect=3e-71]} {Celegans: WBGene00006999, zyx-1, Zyxin, [RH, Score=159, Expect=1e-42]} {Smed: dd_Smed_v6_9489_0_1, dd_Smed_v6_9489_0_1, [RH, Score=208, Expect=2e-62]} {RNA1310_14704.1} {RNA815_28506.1} |
Cumulative graph for MligTC455_39708
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.381 | 3.706 | 0.99972 | 1.00000 | |
| RegionR2 | 1.711 | 3.706 | 0.10527 | 0.39985 | |
| RegionR3 | 1.917 | 3.706 | 0.03371 | 0.31724 | |
| RegionR4 | 3.201 | 3.706 | 0.00048 | 0.00580 | |
| RegionR5 | 0.188 | 3.706 | 0.68461 | 1.00000 | |
| RegionR6 | 1.471 | 3.706 | 0.13818 | 0.66798 | |
| RegionR7 | 1.473 | 3.706 | 0.19993 | 0.80741 | |
| RegionR8 | -5.58 | 3.706 | 0.99952 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.117 | 3.706 | 0.99993 | 1.00000 | |
| RegenerationR2 | 0.254 | 3.706 | 0.62191 | 0.92381 | |
| RegenerationR3 | 0.284 | 3.706 | 0.62604 | 0.91842 | |
| RegenerationR4 | -0.643 | 3.706 | 0.30107 | 0.74278 | |
| RegenerationR5 | 1.545 | 3.706 | 0.01160 | 0.18998 | |
| RegenerationR6 | 0.374 | 3.706 | 0.53279 | 0.82859 | |
| RegenerationBL | 2.435 | 3.706 | 0.04765 | 0.24997 | |
| RegenerationTP | 3.3 | 3.706 | 0.04046 | 0.33464 |
Genes with expression patterns similar to MligTC455_39708
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39708 | 428 | 8.91 | Mlig455_037474, Mlig455_044499 | Neo: - Age: - Region-enriched R4: 3.201/0.00580 |
LIMD1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_037474 {REF} {Length: 2250} {Pfam: LIM domain [PF00412.24, score=93.6]} {Human: ENSG00000144791, LIMD1, LIM domains containing 1, [RH, Score=236, Expect=3e-70]; ENSG00000142279, WTIP, WT1 interacting protein, [RH, Score=229, Expect=1e-69]} {Mouse: ENSMUSG00000025239, Limd1, LIM domains containing 1, [RH, Score=237, Expect=2e-70]; ENSMUSG00000036459, Wtip, WT1-interacting protein, [RH, Score=230, Expect=9e-71]} {Dmel: FBgn0030530, jub, Ajuba LIM protein, [RH, Score=238, Expect=2e-70]} {Celegans: WBGene00006999, zyx-1, Zyxin, [RH, Score=159, Expect=2e-42]} {Smed: dd_Smed_v6_9489_0_2, dd_Smed_v6_9489_0_2, [RH, Score=209, Expect=1e-62]} {RNA1509_31264} {RNA1310_14704.1} {RNA815_28506.1} Mlig455_044499 {REF} {Length: 3868} {Pfam: LIM domain [PF00412.24, score=93.4]; Protein of unknown function (DUF2722) [PF10846.10, score=27.4]} {Human: ENSG00000144791, LIMD1, LIM domains containing 1, [RH, Score=239, Expect=3e-71]; ENSG00000142279, WTIP, WT1 interacting protein, [RH, Score=231, Expect=2e-70]} {Mouse: ENSMUSG00000025239, Limd1, LIM domains containing 1, [RH, Score=239, Expect=2e-71]; ENSMUSG00000036459, Wtip, WT1-interacting protein, [RH, Score=233, Expect=8e-72]} {Dmel: FBgn0030530, jub, Ajuba LIM protein, [RH, Score=239, Expect=3e-71]} {Celegans: WBGene00006999, zyx-1, Zyxin, [RH, Score=159, Expect=1e-42]} {Smed: dd_Smed_v6_9489_0_1, dd_Smed_v6_9489_0_1, [RH, Score=208, Expect=2e-62]} {RNA1310_14704.1} {RNA815_28506.1} |
| 2. | MligTC455_52655 | 410 | 8.53 | Mlig455_019237, Mlig455_035541 | Neo: - Age: - |
PXDN | 1.677 | 0.711 | - | - | - | 0.966 | - | Mlig455_019237 {REF} {Length: 3563} {Pfam: Animal haem peroxidase [PF03098.17, score=611.8]; Immunoglobulin domain [PF13927.8, score=51.1]; Immunoglobulin I-set domain [PF07679.18, score=38.0]; Immunoglobulin domain [PF00047.27, score=37.1]} {Human: ENSG00000130508, PXDN, peroxidasin, [RH, Score=749, Expect=0.0]} {Mouse: ENSMUSG00000020674, Pxdn, peroxidasin, [RH, Score=735, Expect=0.0]} {Dmel: FBgn0011828, Pxn, Peroxidasin, [RH, Score=673, Expect=0.0]} {Celegans: WBGene00004256, pxn-1, Peroxidasin homolog, [RH, Score=648, Expect=0.0]} {Smed: dd_Smed_v6_3603_0_1, dd_Smed_v6_3603_0_1, [RH, Score=852, Expect=0.0]} {RNA1509_23355} {RNA1310_15949} {RNA815_14560} Mlig455_035541 {REF} {Length: 4018} {Pfam: Animal haem peroxidase [PF03098.17, score=613.2]; Immunoglobulin domain [PF13927.8, score=51.2]; Immunoglobulin I-set domain [PF07679.18, score=39.6]; Immunoglobulin domain [PF00047.27, score=37.4]} {Human: ENSG00000130508, PXDN, peroxidasin, [RH, Score=746, Expect=0.0]} {Mouse: ENSMUSG00000020674, Pxdn, peroxidasin, [RH, Score=732, Expect=0.0]} {Dmel: FBgn0011828, Pxn, Peroxidasin, [RH, Score=670, Expect=0.0]} {Celegans: WBGene00004256, pxn-1, Peroxidasin homolog, [RH, Score=646, Expect=0.0]} {Smed: dd_Smed_v6_3603_0_1, dd_Smed_v6_3603_0_1, [RH, Score=850, Expect=0.0]} {RNA1509_23355} {RNA1310_15949} {RNA815_14560} |
| 3. | MligTC455_37471 | 494 | 10.29 | Mlig455_067139 | Neo: - Age: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_067139 {REF} {Length: 3223} {Pfam: Polymer-forming cytoskeletal [PF04519.15, score=36.7]} {RNA1509_58187} {RNA1310_57569} {RNA815_25125} | |
| 4. | MligTC455_20056 | 31 | 0.64 | Mlig455_031637 | Neo: - Age: - |
0.955 | - | - | - | - | 0.955 | - | Mlig455_031637 {REF} {Length: 993} {NoTransDecoderORF} | |
| 5. | MligTC455_29138 | 150 | 3.13 | Mlig455_047030 | Neo: - Age: Up-Down-Up |
EFR3A | 0.954 | - | - | - | - | 0.954 | - | Mlig455_047030 {REF} {Length: 5267} {TRANSSPLICED} {Pfam: ZIP Zinc transporter [PF02535.24, score=66.2]} {Human: ENSG00000132294, EFR3A, EFR3 homolog A, [RH, Score=343, Expect=2e-103]; ENSG00000084710, EFR3B, EFR3 homolog B, [RH, Score=327, Expect=2e-97]} {Mouse: ENSMUSG00000015002, Efr3a, EFR3 homolog A, [Score=346, Expect=4e-104]} {Dmel: FBgn0086784, stmA, stambha A, [Score=315, Expect=4e-93]} {Celegans: WBGene00016311, C32D5.3, Protein EFR3 homolog, [Score=249, Expect=2e-69]} {Smed: dd_Smed_v6_3212_0_1, dd_Smed_v6_3212_0_1, [RH, Score=397, Expect=5e-123]} {RNA1509_14238} {RNA1310_2165.2} {RNA815_4536} |
| 6. | MligTC455_16898 | 256 | 5.32 | Mlig455_054659 | Neo: - Age: logFC(26M/2M)=0.653 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_054659 {REF} {Length: 883} {RNA1509_34832} {RNA1310_22335} {RNA815_10376} | |
| 7. | MligTC455_35415 | 2569 | 53.52 | Mlig455_040549, Mlig455_062089 | Neo: - Age: - Region-enriched R2: 1.828/0.00030 |
SPON1 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_040549 {REF} {Length: 3554} {Pfam: Spondin_N [PF06468.15, score=172.2]; Kunitz/Bovine pancreatic trypsin inhibitor domain [PF00014.25, score=92.5]; Spondin-like TSP1 domain [PF19028.2, score=86.2]; Thrombospondin type 1 domain [PF00090.21, score=43.5]; Reeler domain [PF02014.18, score=33.7]} {Human: ENSG00000262655, SPON1, spondin 1, [RH, Score=221, Expect=5e-60]} {Mouse: ENSMUSG00000038156, Spon1, spondin 1, (f-spondin) extracellular matrix protein, [RH, Score=224, Expect=3e-61]} {Dmel: FBgn0026721, fat-spondin, [RH, Score=219, Expect=7e-60]} {Celegans: WBGene00006893, spon-1, SPONdin (Extracellular matrix glycoprotein) family, [RH, Score=236, Expect=1e-65]} {Smed: dd_Smed_v6_2400_0_1, dd_Smed_v6_2400_0_1, [RH, Score=376, Expect=7e-117]} {RNA1509_12151, RNA1509_34516, RNA1509_4778} {RNA1310_4115.1, RNA1509_12151, RNA1509_34516, RNA1509_4778} {RNA1509_12151, RNA1509_34516, RNA1509_4778, RNA815_2374} Mlig455_062089 {REF} {Length: 3332} {Pfam: Spondin_N [PF06468.15, score=172.9]; Kunitz/Bovine pancreatic trypsin inhibitor domain [PF00014.25, score=103.7]; Spondin-like TSP1 domain [PF19028.2, score=85.5]; Thrombospondin type 1 domain [PF00090.21, score=47.2]; Reeler domain [PF02014.18, score=34.0]} {Human: ENSG00000262655, SPON1, spondin 1, [RH, Score=221, Expect=1e-59]} {Mouse: ENSMUSG00000038156, Spon1, spondin 1, (f-spondin) extracellular matrix protein, [RH, Score=223, Expect=8e-61]} {Dmel: FBgn0026721, fat-spondin, [RH, Score=217, Expect=4e-59]} {Celegans: WBGene00006893, spon-1, SPONdin (Extracellular matrix glycoprotein) family, [RH, Score=236, Expect=3e-65]} {Smed: dd_Smed_v6_2400_0_1, dd_Smed_v6_2400_0_1, [RH, Score=375, Expect=8e-116]} {RNA1509_12151, RNA1509_45559} {RNA1310_4115.1, RNA1509_45559} {RNA1509_45559, RNA815_2374} |