M. lignano Tomo-Seq
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Results for MligTC455_39802

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_39802 144 3.00 Mlig455_018704

Neo: -

Age: Down-Up-Up

 NDUFAF3 Mlig455_018704 {REF} {Length: 1152} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF498/DUF598) [PF04430.16, score=76.3]} {Human: ENSG00000178057, NDUFAF3, NADH:ubiquinone oxidoreductase complex assembly factor 3, [RH, Score=76.3, Expect=4e-16]} {Mouse: ENSMUSG00000070283, Ndufaf3, NADH:ubiquinone oxidoreductase complex assembly factor 3, [RH, Score=73.2, Expect=4e-15]} {Dmel: FBgn0034919, CG5569, [RH, Score=105, Expect=5e-27]} {Celegans: WBGene00011123, nuaf-3, NADH:Ubiquinone oxidoreductase Assembly Factor, [RH, Score=105, Expect=1e-26]} {Smed: dd_Smed_v6_4891_0_1, dd_Smed_v6_4891_0_1, [RH, Score=110, Expect=2e-28]} {RNA1509_13305} {RNA1310_30623} {RNA815_13719}

Cumulative graph for MligTC455_39802

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 2.679 2.206 0.26393 0.91381
RegionR2 -0.062 2.206 0.83629 1.00000
RegionR3 -0.325 2.206 0.90473 1.00000
RegionR4 1.209 2.206 0.26459 0.56889
RegionR5 1.651 2.206 0.02696 0.11995
RegionR6 -0.25 2.206 0.88839 1.00000
RegionR7 0.313 2.206 0.70554 1.00000
RegionR8 -5.214 2.206 0.09816 0.58988

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.506 2.206 0.84860 1.00000
RegenerationR2 0.524 2.206 0.49697 0.87011
RegenerationR3 0.598 2.206 0.51133 0.86205
RegenerationR4 -0.064 2.206 0.93166 1.00000
RegenerationR5 -0.181 2.206 0.79641 0.98767
RegenerationR6 -0.573 2.206 0.57664 0.85550
RegenerationBL 3.615 2.206 0.00704 0.08162
RegenerationTP 2.651 2.206 0.20483 0.64691


Genes with expression patterns similar to MligTC455_39802

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_39802 144 3 Mlig455_018704

Neo: -

Age: Down-Up-Up

 NDUFAF3 5 1.000 1.000 1.000 - 1.000 1.000 Mlig455_018704 {REF} {Length: 1152} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF498/DUF598) [PF04430.16, score=76.3]} {Human: ENSG00000178057, NDUFAF3, NADH:ubiquinone oxidoreductase complex assembly factor 3, [RH, Score=76.3, Expect=4e-16]} {Mouse: ENSMUSG00000070283, Ndufaf3, NADH:ubiquinone oxidoreductase complex assembly factor 3, [RH, Score=73.2, Expect=4e-15]} {Dmel: FBgn0034919, CG5569, [RH, Score=105, Expect=5e-27]} {Celegans: WBGene00011123, nuaf-3, NADH:Ubiquinone oxidoreductase Assembly Factor, [RH, Score=105, Expect=1e-26]} {Smed: dd_Smed_v6_4891_0_1, dd_Smed_v6_4891_0_1, [RH, Score=110, Expect=2e-28]} {RNA1509_13305} {RNA1310_30623} {RNA815_13719}
2. MligTC455_48832 175 3.64 Mlig455_049173

Neo: -

Age: -

Region-enriched R5: 2.493/0.03133

Regeneration-upregulated BL: 4.384

Regeneration-enriched BL: 4.384

 0.969 - - - - - 0.969 Mlig455_049173 {REF} {Length: 2999} {RNA1509_10362} {RNA1310_2269.1} {RNA815_8540}
3. MligTC455_42827 161 3.36 Mlig455_040618, Mlig455_040628

Neo: -

Age: logFC(26M/2M)=-0.538

 WDR26 0.959 - - - - - 0.959

Mlig455_040618 {REF} {Length: 3504} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=63.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=36.6]} {Human: ENSG00000162923, WDR26, WD repeat domain 26, [RH, Score=418, Expect=3e-138]} {Mouse: ENSMUSG00000038733, Wdr26, WD repeat domain 26, [RH, Score=427, Expect=2e-142]} {Dmel: FBgn0037094, CG7611, [RH, Score=392, Expect=9e-129]} {Celegans: WBGene00010572, wdr-5.2, WD repeat-containing protein wdr-5.2, [Score=68.6, Expect=4e-12]} {Smed: dd_Smed_v6_6611_0_1, dd_Smed_v6_6611_0_1, [RH, Score=228, Expect=8e-66]} {RNA1509_20107} {RNA1310_14508.1} {RNA815_16830}

Mlig455_040628 {REF} {Length: 1585} {Pfam: WD domain, G-beta repeat [PF00400.34, score=28.2]} {Human: ENSG00000162923, WDR26, WD repeat domain 26, [Score=134, Expect=6e-33]} {Mouse: ENSMUSG00000038733, Wdr26, WD repeat domain 26, [Score=134, Expect=3e-33]} {Dmel: FBgn0037094, CG7611, [Score=127, Expect=4e-31]} {Smed: dd_Smed_v6_6611_0_1, dd_Smed_v6_6611_0_1, [Score=79.3, Expect=2e-15]} {RNA1509_20107} {RNA1310_14508.1} {RNA815_16830}
4. MligTC455_49080 427 8.9 Mlig455_053818

Neo: -

Age: Down-Up-Down

 CANX 0.952 - - - - - 0.952 Mlig455_053818 {REF} {Length: 2119} {TRANSSPLICED} {Pfam: Calreticulin family [PF00262.20, score=472.5]} {Human: ENSG00000127022, CANX, calnexin, [Score=481, Expect=8e-164]; ENSG00000283777, CANX, calnexin, [Score=481, Expect=8e-164]} {Mouse: ENSMUSG00000020368, Canx, calnexin, [Score=471, Expect=6e-160]} {Dmel: FBgn0015622, Cnx99A, Calnexin 99A, [Score=409, Expect=7e-136]} {Celegans: WBGene00000567, cnx-1, Calnexin, [Score=399, Expect=9e-132]} {Smed: dd_Smed_v6_632_0_1, dd_Smed_v6_632_0_1, [Score=524, Expect=0.0]} {RNA1509_13172, RNA1509_44465, RNA1509_45014, RNA1509_58386} {RNA1310_13618.1, RNA1509_13172, RNA1509_44465, RNA1509_45014, RNA1509_58386} {RNA1509_13172, RNA1509_44465, RNA1509_45014, RNA1509_58386, RNA815_14640}
5. MligTC455_16742 453 9.44 Mlig455_066823

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.524

Region-enriched R5: 1.126/0.00482

 NF2 0.951 - - - - - 0.951 Mlig455_066823 {REF} {Length: 3854} {TRANSSPLICED} {Pfam: CDK5 regulatory subunit-associated protein 3 [PF05600.14, score=309.6]; FERM C-terminal PH-like domain [PF09380.12, score=49.8]; FERM N-terminal domain [PF09379.12, score=39.5]; FERM central domain [PF00373.20, score=32.1]; Ezrin/radixin/moesin family [PF00769.21, score=28.3]} {Human: ENSG00000186575, NF2, neurofibromin 2, [Score=234, Expect=2e-65]} {Mouse: ENSMUSG00000009073, Nf2, neurofibromin 2, [Score=236, Expect=3e-66]} {Dmel: FBgn0086384, Mer, Merlin, [Score=240, Expect=1e-67]} {Celegans: WBGene00001333, erm-1, ERM-1B; Ezrin/Radixin/Moesin, [Score=210, Expect=5e-58]} {Smed: dd_Smed_v6_8101_0_1, dd_Smed_v6_8101_0_1, [Score=193, Expect=2e-52]} {RNA1509_28763} {RNA1310_9789} {RNA815_6590}

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