Data search
Results for MligTC455_40099
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40099 | 1638 | 34.12 | Mlig455_051041 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.282 Regeneration-upregulated BL: 1.263 Regeneration-enriched BL: 1.263 |
G3BP2 | Mlig455_051041 {REF} {Length: 2412} {TRANSSPLICED} {Pfam: Nuclear transport factor 2 (NTF2) domain [PF02136.22, score=86.5]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=43.7]; Orn/Lys/Arg decarboxylase, C-terminal domain [PF03711.17, score=19.1]} {Human: ENSG00000138757, G3BP2, G3BP stress granule assembly factor 2, [RH, Score=162, Expect=4e-44]} {Mouse: ENSMUSG00000029405, G3bp2, GTPase activating protein (SH3 domain) binding protein 2, [RH, Score=162, Expect=4e-44]} {Dmel: FBgn0015778, rin, rasputin, [RH, Score=141, Expect=5e-36]} {Celegans: WBGene00010677, gtbp-1, Ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein, [Score=53.5, Expect=2e-07]} {Smed: dd_Smed_v6_316_0_1, dd_Smed_v6_316_0_1, [RH, Score=132, Expect=2e-34]} {RNA1509_20144, RNA1509_29903, RNA1509_3175} {RNA1310_10257, RNA1509_20144, RNA1509_29903} {RNA1509_20144, RNA1509_29903, RNA815_10851} |
Cumulative graph for MligTC455_40099
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.086 | 5.325 | 0.19774 | 0.83367 | |
| RegionR2 | 0.596 | 5.325 | 0.06197 | 0.29993 | |
| RegionR3 | 0.12 | 5.325 | 0.64875 | 1.00000 | |
| RegionR4 | 0.522 | 5.325 | 0.07328 | 0.24990 | |
| RegionR5 | 0.221 | 5.325 | 0.34774 | 0.69662 | |
| RegionR6 | 0.134 | 5.325 | 0.61665 | 1.00000 | |
| RegionR7 | -0.037 | 5.325 | 0.91862 | 1.00000 | |
| RegionR8 | -0.47 | 5.325 | 0.33575 | 0.96849 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.378 | 5.325 | 0.75941 | 1.00000 | |
| RegenerationR2 | 0.096 | 5.325 | 0.69752 | 0.95527 | |
| RegenerationR3 | 0.424 | 5.325 | 0.13036 | 0.55351 | |
| RegenerationR4 | 0.038 | 5.325 | 0.89120 | 1.00000 | |
| RegenerationR5 | 0.314 | 5.325 | 0.21691 | 0.65177 | |
| RegenerationR6 | 0.75 | 5.325 | 0.00670 | 0.09996 | |
| RegenerationBL | 1.263 | 5.325 | 0.00007 | 0.00350 | Specific for BL: 1.263 |
| RegenerationTP | 0.233 | 5.325 | 0.57113 | 0.94505 |
Genes with expression patterns similar to MligTC455_40099
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40099 | 1638 | 34.12 | Mlig455_051041 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.282 Regeneration-upregulated BL: 1.263 Regeneration-enriched BL: 1.263 |
G3BP2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_051041 {REF} {Length: 2412} {TRANSSPLICED} {Pfam: Nuclear transport factor 2 (NTF2) domain [PF02136.22, score=86.5]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=43.7]; Orn/Lys/Arg decarboxylase, C-terminal domain [PF03711.17, score=19.1]} {Human: ENSG00000138757, G3BP2, G3BP stress granule assembly factor 2, [RH, Score=162, Expect=4e-44]} {Mouse: ENSMUSG00000029405, G3bp2, GTPase activating protein (SH3 domain) binding protein 2, [RH, Score=162, Expect=4e-44]} {Dmel: FBgn0015778, rin, rasputin, [RH, Score=141, Expect=5e-36]} {Celegans: WBGene00010677, gtbp-1, Ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein, [Score=53.5, Expect=2e-07]} {Smed: dd_Smed_v6_316_0_1, dd_Smed_v6_316_0_1, [RH, Score=132, Expect=2e-34]} {RNA1509_20144, RNA1509_29903, RNA1509_3175} {RNA1310_10257, RNA1509_20144, RNA1509_29903} {RNA1509_20144, RNA1509_29903, RNA815_10851} |
| 2. | MligTC455_15602 | 268 | 5.57 | Mlig455_042253 | Neo: - Age: logFC(26M/2M)=-0.631 Region-enriched R4: 2.225/0.04268 |
CASP3 | 0.968 | - | - | - | 0.968 | - | - | Mlig455_042253 {REF} {Length: 1874} {Pfam: Caspase domain [PF00656.24, score=103.2]; Ankyrin repeats (3 copies) [PF12796.9, score=42.9]; Ankyrin repeats (many copies) [PF13857.8, score=36.2]; Ankyrin repeats (many copies) [PF13637.8, score=31.3]; Ankyrin repeat [PF13606.8, score=24.2]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=122, Expect=2e-31]; ENSG00000165806, CASP7, caspase 7, [Score=121, Expect=2e-30]} {Mouse: ENSMUSG00000025076, Casp7, caspase 7, [Score=122, Expect=2e-31]; ENSMUSG00000031628, Casp3, caspase 3, [Score=119, Expect=3e-30]} {Dmel: FBgn0026404, Dronc, Death regulator Nedd2-like caspase, [RH, Score=98.6, Expect=4e-22]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=92.0, Expect=9e-21]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=134, Expect=1e-36]} {RNA1509_39319} {RNA1310_43842} {RNA815_7180.1} |
| 3. | MligTC455_20006 | 1581 | 32.94 | Mlig455_029560, Mlig455_040442, Mlig455_040470 | Neo: - Age: Down-Down-Up Region-enriched R4: 1.124/0.02503 |
RXRA | 0.965 | - | - | - | 0.965 | - | - | Mlig455_029560 {REF} {Length: 1833} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=102.6]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=85.5]} {Human: ENSG00000186350, RXRA, retinoid X receptor alpha, [Score=360, Expect=4e-122]; ENSG00000143171, RXRG, retinoid X receptor gamma, [Score=344, Expect=1e-117]} {Mouse: ENSMUSG00000015846, Rxra, retinoid X receptor alpha, [Score=358, Expect=7e-122]; ENSMUSG00000015843, Rxrg, retinoid X receptor gamma, [Score=343, Expect=2e-117]} {Dmel: FBgn0003651, svp, seven up, [Score=210, Expect=2e-63]} {Celegans: WBGene00003639, nhr-49, Nuclear hormone receptor family member nhr-49, [Score=136, Expect=2e-36]} {Smed: dd_Smed_v6_12699_0_1, dd_Smed_v6_12699_0_1, [Score=207, Expect=5e-62]} {RNA1509_54992} {RNA1310_20454} {RNA815_10257} Mlig455_040442 {REF} {Length: 1996} {TRANSSPLICED} {Pfam: Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=125.8]; Zinc finger, C4 type (two domains) [PF00105.20, score=102.3]} {Human: ENSG00000186350, RXRA, retinoid X receptor alpha, [RH, Score=437, Expect=1e-151]; ENSG00000143171, RXRG, retinoid X receptor gamma, [RH, Score=431, Expect=4e-151]} {Mouse: ENSMUSG00000015846, Rxra, retinoid X receptor alpha, [RH, Score=438, Expect=5e-152]; ENSMUSG00000015843, Rxrg, retinoid X receptor gamma, [RH, Score=420, Expect=1e-146]} {Dmel: FBgn0003651, svp, seven up, [Score=242, Expect=9e-75]} {Celegans: WBGene00003639, nhr-49, Nuclear hormone receptor family member nhr-49, [RH, Score=172, Expect=7e-49]} {Smed: dd_Smed_v6_12699_0_1, dd_Smed_v6_12699_0_1, [RH, Score=261, Expect=1e-81]} {RNA1509_24567, RNA1509_54992} {RNA1310_20454, RNA1509_54992} {RNA1509_54992, RNA815_10257} Mlig455_040470 {REF} {Length: 2001} {TRANSSPLICED} {Pfam: Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=125.8]; Zinc finger, C4 type (two domains) [PF00105.20, score=102.3]} {Human: ENSG00000186350, RXRA, retinoid X receptor alpha, [RH, Score=437, Expect=1e-151]; ENSG00000143171, RXRG, retinoid X receptor gamma, [RH, Score=431, Expect=4e-151]} {Mouse: ENSMUSG00000015846, Rxra, retinoid X receptor alpha, [RH, Score=438, Expect=5e-152]; ENSMUSG00000015843, Rxrg, retinoid X receptor gamma, [RH, Score=420, Expect=1e-146]} {Dmel: FBgn0003651, svp, seven up, [Score=242, Expect=9e-75]} {Celegans: WBGene00003639, nhr-49, Nuclear hormone receptor family member nhr-49, [RH, Score=172, Expect=7e-49]} {Smed: dd_Smed_v6_12699_0_1, dd_Smed_v6_12699_0_1, [RH, Score=261, Expect=1e-81]} {RNA1509_24567, RNA1509_52519} {RNA1310_20454, RNA1509_24567, RNA1509_52519} {RNA1509_24567, RNA1509_52519, RNA815_10257} |
| 4. | MligTC455_54039 | 319 | 6.65 | Mlig455_046626 | Neo: - Age: - |
CBX5 | 0.965 | - | - | - | - | 0.965 | - | Mlig455_046626 {REF} {Length: 1679} {TRANSSPLICED} {Pfam: Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=70.0]; Chromo shadow domain [PF01393.21, score=61.7]} {Human: ENSG00000094916, CBX5, chromobox 5, [Score=132, Expect=2e-38]; ENSG00000122565, CBX3, chromobox 3, [Score=130, Expect=5e-38]} {Mouse: ENSMUSG00000009575, Cbx5, chromobox 5, [Score=132, Expect=1e-38]; ENSMUSG00000029836, Cbx3, chromobox 3, [Score=130, Expect=3e-38]} {Dmel: FBgn0003607, Su(var)205, Suppressor of variegation 205, [Score=117, Expect=1e-32]} {Celegans: WBGene00001995, hpl-1, HP1 Like (Heterochromatin protein); Heterochromatin protein 1 homolog, [Score=83.6, Expect=4e-20]} {Smed: dd_Smed_v6_928_0_1, dd_Smed_v6_928_0_1, [Score=121, Expect=2e-34]} {RNA1509_58928} {RNA1310_4983} {RNA815_19481.1} |
| 5. | MligTC455_32794 | 550 | 11.46 | Mlig455_022149 | Neo: - Age: Up-Down-Down |
RBM4B | 0.962 | - | - | - | - | 0.962 | - | Mlig455_022149 {REF} {Length: 6473} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=37.2]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=20.9]} {Human: ENSG00000173914, RBM4B, RNA binding motif protein 4B, [RH, Score=71.6, Expect=1e-14]; ENSG00000173933, RBM4, RNA binding motif protein 4, [RH, Score=71.6, Expect=2e-14]; ENSG00000239306, RBM14, RNA binding motif protein 14, [RH, Score=69.7, Expect=2e-12]} {Mouse: ENSMUSG00000094936, Rbm4, RNA binding motif protein 4, [RH, Score=71.6, Expect=9e-15]; ENSMUSG00000033760, Rbm4b, RNA binding motif protein 4B, [RH, Score=71.6, Expect=9e-15]; ENSMUSG00000006456, Rbm14, RNA binding motif protein 14, [RH, Score=70.9, Expect=5e-13]} {Celegans: WBGene00004384, rnp-1, RNA-binding protein rnp-1, [Score=50.8, Expect=5e-07]} {Smed: dd_Smed_v6_14010_0_1, dd_Smed_v6_14010_0_1, [Score=49.3, Expect=2e-06]} {RNA1509_22494, RNA1509_28767, RNA1509_44258, RNA1509_48912, RNA1509_50650} {RNA1310_8274.1, RNA1509_28767, RNA1509_44258, RNA1509_48912, RNA1509_50650} {RNA1509_28767, RNA1509_44258, RNA1509_48912, RNA1509_50650, RNA815_8688.1} |
| 6. | MligTC455_48831 | 759 | 15.82 | Mlig455_040825, Mlig455_040922 | Neo: - Age: logFC(26M/2M)=0.231 Region-enriched R4: 3.032/0.00938 |
FBXO38 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_040825 {REF} {Length: 4225} {Pfam: F-box-like [PF12937.9, score=32.9]; F-box domain [PF00646.35, score=20.4]} {Human: ENSG00000145868, FBXO38, F-box protein 38, [RH, Score=256, Expect=1e-69]} {Mouse: ENSMUSG00000042211, Fbxo38, F-box protein 38, [RH, Score=253, Expect=5e-69]} {Smed: dd_Smed_v6_7155_0_1, dd_Smed_v6_7155_0_1, [RH, Score=237, Expect=1e-63]} {RNA1509_10362, RNA1509_31016, RNA1509_55252, RNA1509_58294} {RNA1310_2269.1, RNA1509_10362, RNA1509_31016, RNA1509_55252, RNA1509_58294} {RNA1509_10362, RNA1509_31016, RNA1509_55252, RNA1509_58294, RNA815_7462} Mlig455_040922 {REF} {Length: 4084} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=33.0]; F-box domain [PF00646.35, score=20.4]} {Human: ENSG00000145868, FBXO38, F-box protein 38, [RH, Score=257, Expect=4e-70]} {Mouse: ENSMUSG00000042211, Fbxo38, F-box protein 38, [RH, Score=254, Expect=2e-69]} {Smed: dd_Smed_v6_7155_0_1, dd_Smed_v6_7155_0_1, [RH, Score=237, Expect=6e-64]} {RNA1509_10362, RNA1509_34456} {RNA1310_2269.1, RNA1509_34456} {RNA1509_34456, RNA815_7462} |
| 7. | MligTC455_20176 | 283 | 5.89 | Mlig455_059431 | Neo: - Age: - |
PLEKHD1 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_059431 {REF} {Length: 2770} {TRANSSPLICED} {Pfam: PH domain [PF00169.31, score=45.6]} {Human: ENSG00000175985, PLEKHD1, pleckstrin homology and coiled-coil domain containing D1, [RH, Score=134, Expect=5e-34]} {Mouse: ENSMUSG00000066438, Plekhd1, pleckstrin homology domain containing, family D (with coiled-coil domains) member 1, [RH, Score=133, Expect=8e-34]} {Smed: dd_Smed_v6_3737_0_1, dd_Smed_v6_3737_0_1, [RH, Score=177, Expect=1e-50]} {RNA1509_21443, RNA1509_31905} {RNA1310_13978, RNA1509_21443, RNA1509_31905} {RNA1509_21443, RNA1509_31905, RNA815_19643} |
| 8. | MligTC455_51670 | 423 | 8.81 | Mlig455_054981 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 1.650/0.04341 |
0.952 | - | - | - | 0.952 | - | - | Mlig455_054981 {REF} {Length: 2869} {TRANSSPLICED} {Pfam: PEST, proteolytic signal-containing nuclear protein family [PF15473.8, score=59.2]} {RNA1509_55181, RNA1509_7874} {RNA1310_7292.1, RNA1509_55181} {RNA1509_55181, RNA815_7029.1} |