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Results for MligTC455_40229

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_40229 55 1.14 Mlig455_013426, Mlig455_020315, Mlig455_051851

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.817

Mlig455_013426 {REF} {Length: 2790} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=33.5]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=76.3, Expect=2e-17]} {RNA1509_56234} {RNA1310_4326.1} {RNA815_14392}

Mlig455_020315 {REF} {Length: 4608} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=107.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=104.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=65.3]; Integrase zinc binding domain [PF17921.3, score=61.0]; Integrase core domain [PF00665.28, score=52.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=20.3]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=79.7, Expect=2e-14]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=79.7, Expect=2e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=291, Expect=8e-82]} {RNA1509_56234} {RNA1310_4313.1, RNA1509_56234} {RNA1509_56234, RNA815_14392}

Mlig455_051851 {REF} {Length: 1788} {Pfam: Integrase zinc binding domain [PF17921.3, score=61.9]; Integrase core domain [PF00665.28, score=55.2]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=55.1, Expect=2e-07]} {Smed: dd_Smed_v6_28750_0_1, dd_Smed_v6_28750_0_1, [Score=62.4, Expect=9e-12]} {RNA1509_56234} {RNA1310_4313.1} {RNA815_29579}

Cumulative graph for MligTC455_40229

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.002 1.537 0.99973 1.00000
RegionR2 -1.887 1.537 0.98609 1.00000
RegionR3 -0.386 1.537 0.86500 1.00000
RegionR4 1.668 1.537 0.41391 0.74099
RegionR5 0.468 1.537 0.61049 0.96719
RegionR6 0.708 1.537 0.58915 1.00000
RegionR7 1.712 1.537 0.31862 0.95341
RegionR8 -3.285 1.537 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -3.613 1.537 0.99980 1.00000
RegenerationR2 1.022 1.537 0.29372 0.73666
RegenerationR3 -0.687 1.537 0.51980 0.86654
RegenerationR4 1.608 1.537 0.29697 0.73924
RegenerationR5 0.219 1.537 0.96367 1.00000
RegenerationR6 -0.584 1.537 0.52133 0.82163
RegenerationBL 0.728 1.537 0.64733 0.98490
RegenerationTP -1.425 1.537 0.94228 1.00000


Genes with expression patterns similar to MligTC455_40229

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_40229 55 1.14 Mlig455_013426, Mlig455_020315, Mlig455_051851

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.817

 5 1.000 - 1.000 1.000 1.000 1.000

Mlig455_013426 {REF} {Length: 2790} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=33.5]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=76.3, Expect=2e-17]} {RNA1509_56234} {RNA1310_4326.1} {RNA815_14392}

Mlig455_020315 {REF} {Length: 4608} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=107.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=104.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=65.3]; Integrase zinc binding domain [PF17921.3, score=61.0]; Integrase core domain [PF00665.28, score=52.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=20.3]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=79.7, Expect=2e-14]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=79.7, Expect=2e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=291, Expect=8e-82]} {RNA1509_56234} {RNA1310_4313.1, RNA1509_56234} {RNA1509_56234, RNA815_14392}

Mlig455_051851 {REF} {Length: 1788} {Pfam: Integrase zinc binding domain [PF17921.3, score=61.9]; Integrase core domain [PF00665.28, score=55.2]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=55.1, Expect=2e-07]} {Smed: dd_Smed_v6_28750_0_1, dd_Smed_v6_28750_0_1, [Score=62.4, Expect=9e-12]} {RNA1509_56234} {RNA1310_4313.1} {RNA815_29579}
2. MligTC455_51850 175 3.64 Mlig455_046816, Mlig455_069969

Neo: -

Age: Down-Up-Up

 2.551 - - - 0.960 0.801 0.790

Mlig455_046816 {REF} {Length: 3750} {RNA1509_35209} {RNA1310_5234} {RNA815_10649}

Mlig455_069969 {REF} {Length: 4802} {RNA1509_12681, RNA1509_35209, RNA1509_54194} {RNA1310_5234, RNA1509_12681, RNA1509_54194} {RNA1509_12681, RNA1509_54194, RNA815_10649}
3. MligTC455_27921 274 5.7 Mlig455_010029

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=1.105

 ACP7 0.972 - - - 0.972 - - Mlig455_010029 {REF} {Length: 2134} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=89.4]; Iron/zinc purple acid phosphatase-like protein C [PF14008.8, score=68.9]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=61.1]} {Human: ENSG00000183760, ACP7, acid phosphatase 7, tartrate resistant (putative), [RH, Score=423, Expect=4e-145]} {Mouse: ENSMUSG00000037469, Acp7, acid phosphatase 7, tartrate resistant, [Score=428, Expect=2e-146]} {Dmel: FBgn0030245, CG1637, [RH, Score=428, Expect=3e-147]} {Celegans: WBGene00219316, F21A3.11, Purple acid phosphatase, [Score=360, Expect=6e-120]} {Smed: dd_Smed_v6_2643_0_1, dd_Smed_v6_2643_0_1, [RH, Score=395, Expect=1e-134]} {RNA1509_17577} {RNA1310_12439} {RNA815_4397}
4. MligTC455_23090 110 2.28 Mlig455_010355

Neo: -

Age: -

 0.971 - - - 0.971 - - Mlig455_010355 {REF} {Length: 2269} {RNA1509_44577} {RNA1310_44961.1} {RNA815_37684}
5. MligTC455_40511 101 2.1 Mlig455_069739

Neo: -

Age: -

 GTDC1 0.959 - - 0.959 - - - Mlig455_069739 {REF} {Length: 1907} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF3524) [PF12038.10, score=201.7]; Glycosyl transferases group 1 [PF00534.22, score=37.1]} {Human: ENSG00000121964, GTDC1, glycosyltransferase like domain containing 1, [RH, Score=291, Expect=2e-93]} {Mouse: ENSMUSG00000036890, Gtdc1, glycosyltransferase-like domain containing 1, [RH, Score=295, Expect=6e-95]} {Dmel: FBgn0030700, CG15914, [RH, Score=294, Expect=7e-96]} {Smed: dd_Smed_v6_17907_0_1, dd_Smed_v6_17907_0_1, [RH, Score=269, Expect=2e-86]} {RNA1509_49025} {RNA1310_12650.1} {RNA815_12472}
6. MligTC455_36069 93 1.94 Mlig455_054357

Neo: -

Age: -

 C17orf97 0.956 - - 0.956 - - - Mlig455_054357 {REF} {Length: 1067} {Human: ENSG00000187624, C17orf97, chromosome 17 open reading frame 97, [Score=45.8, Expect=7e-06]; ENSG00000283985, C17orf97, chromosome 17 open reading frame 97, [Score=45.8, Expect=7e-06]} {RNA1509_48416} {RNA1310_106903}
7. MligTC455_33741 37 0.78 Mlig455_044429, Mlig455_044463, Mlig455_046755

Neo: -

Age: -

 CLK2, CLK3 0.955 0.955 - - - - -

Mlig455_044429 {REF} {Length: 2988} {Pfam: Protein kinase domain [PF00069.27, score=166.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=77.7]} {Human: ENSG00000176444, CLK2, CDC like kinase 2, [RH, Score=457, Expect=9e-156]; ENSG00000261893, CLK2, CDC like kinase 2, [RH, Score=457, Expect=9e-156]; ENSG00000179335, CLK3, CDC like kinase 3, [RH, Score=444, Expect=1e-148]} {Mouse: ENSMUSG00000068917, Clk2, CDC-like kinase 2, [RH, Score=460, Expect=4e-157]; ENSMUSG00000032316, Clk3, CDC-like kinase 3, [RH, Score=442, Expect=3e-148]} {Dmel: FBgn0265998, Doa, Darkener of apricot, [RH, Score=480, Expect=2e-151]} {Celegans: WBGene00006517, madd-3, [Score=416, Expect=1e-141]} {Smed: dd_Smed_v6_8461_0_1, dd_Smed_v6_8461_0_1, [Score=496, Expect=2e-168]} {RNA1509_52185} {RNA1310_8105} {RNA815_38317}

Mlig455_044463 {REF} {Length: 3058} {Pfam: Protein kinase domain [PF00069.27, score=166.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=77.6]} {Human: ENSG00000179335, CLK3, CDC like kinase 3, [RH, Score=437, Expect=6e-146]} {Mouse: ENSMUSG00000068917, Clk2, CDC-like kinase 2, [RH, Score=456, Expect=2e-155]; ENSMUSG00000032316, Clk3, CDC-like kinase 3, [RH, Score=436, Expect=1e-145]} {Dmel: FBgn0265998, Doa, Darkener of apricot, [RH, Score=465, Expect=6e-158]} {Celegans: WBGene00006517, madd-3, [Score=414, Expect=9e-141]} {Smed: dd_Smed_v6_8461_0_1, dd_Smed_v6_8461_0_1, [Score=488, Expect=7e-165]} {RNA1509_52185} {RNA1310_8105, RNA1509_52185} {RNA1509_52185, RNA815_38317}

Mlig455_046755 {REF} {Length: 2356} {Pfam: Protein kinase domain [PF00069.27, score=166.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=77.7]} {Human: ENSG00000176444, CLK2, CDC like kinase 2, [RH, Score=457, Expect=9e-156]; ENSG00000261893, CLK2, CDC like kinase 2, [RH, Score=457, Expect=9e-156]; ENSG00000179335, CLK3, CDC like kinase 3, [RH, Score=444, Expect=1e-148]} {Mouse: ENSMUSG00000068917, Clk2, CDC-like kinase 2, [RH, Score=460, Expect=4e-157]; ENSMUSG00000032316, Clk3, CDC-like kinase 3, [RH, Score=442, Expect=3e-148]} {Dmel: FBgn0265998, Doa, Darkener of apricot, [RH, Score=480, Expect=2e-151]} {Celegans: WBGene00006517, madd-3, [Score=416, Expect=1e-141]} {Smed: dd_Smed_v6_8461_0_1, dd_Smed_v6_8461_0_1, [Score=496, Expect=2e-168]} {RNA1509_52185} {RNA1310_8105} {RNA815_38317}
8. MligTC455_20276 188 3.92 Mlig455_015823, Mlig455_043144, Mlig455_053214

Neo: -

Age: -

 0.952 - - 0.952 - - -

Mlig455_015823 {REF} {Length: 1339} {RNA1509_45539} {RNA1310_32376.2} {RNA815_29511.1}

Mlig455_043144 {REF} {Length: 2521} {TRANSSPLICED} {RNA1509_16686} {RNA1310_16986, RNA1509_16686} {RNA1509_16686, RNA815_5991}

Mlig455_053214 {REF} {Length: 167} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_32376.2} {RNA815_45036}
9. MligTC455_08565 49 1.03 Mlig455_032295

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=1.719

 HPGD 0.95 - - - - - 0.950 Mlig455_032295 {REF} {Length: 1065} {Pfam: short chain dehydrogenase [PF00106.27, score=98.2]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=70.9]; NAD dependent epimerase/dehydratase family [PF01370.23, score=32.2]; KR domain [PF08659.12, score=30.5]; GDP-mannose 4,6 dehydratase [PF16363.7, score=24.3]; Polysaccharide biosynthesis protein [PF02719.17, score=18.8]} {Human: ENSG00000164120, HPGD, 15-hydroxyprostaglandin dehydrogenase, [Score=121, Expect=4e-33]} {Mouse: ENSMUSG00000031613, Hpgd, hydroxyprostaglandin dehydrogenase 15 (NAD), [Score=117, Expect=6e-32]} {Dmel: FBgn0011693, Pdh, Photoreceptor dehydrogenase, [Score=90.5, Expect=1e-21]} {Celegans: WBGene00000968, dhs-4, DeHydrogenases, Short chain, [Score=69.3, Expect=6e-14]} {Smed: dd_Smed_v6_2263_0_1, dd_Smed_v6_2263_0_1, [Score=53.9, Expect=7e-09]} {RNA1509_33517} {RNA1310_34765.1} {RNA815_8749.1}

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