TomoSeq data search

Data search

Results for MligTC455_40536

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_40536

837

17.43

Mlig455_045210

Neo: -

Age: Down-Up-Up

GID4

Mlig455_045210 {REF} {Length: 575} {TRANSSPLICED} {Pfam: Vacuolar import and degradation protein [PF09783.11, score=163.7]} {Human: ENSG00000141034, GID4, GID complex subunit 4 homolog, [RH, Score=197, Expect=1e-62]} {Mouse: ENSMUSG00000018415, Gid4, GID complex subunit 4, VID24 homolog, [RH, Score=199, Expect=8e-65]} {Smed: dd_Smed_v6_2974_0_1, dd_Smed_v6_2974_0_1, [RH, Score=113, Expect=2e-31]} {RNA1509_43603} {RNA1310_19703.1} {RNA815_17188.1}

Cumulative graph for MligTC455_40536

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.742	4.364	0.40970	1.00000
RegionR2	-0.421	4.364	0.33053	0.72282
RegionR3	-0.055	4.364	0.88012	1.00000
RegionR4	0.627	4.364	0.11733	0.34221
RegionR5	0.375	4.364	0.26100	0.58207
RegionR6	-0.345	4.364	0.36958	0.95075
RegionR7	0.391	4.364	0.35175	0.98733
RegionR8	0.17	4.364	0.75078	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.656	4.364	0.03939	0.66306
RegenerationR2	-0.04	4.364	0.91835	1.00000
RegenerationR3	-0.615	4.364	0.13829	0.56392
RegenerationR4	-0.47	4.364	0.24917	0.69755
RegenerationR5	-0.492	4.364	0.20088	0.63368
RegenerationR6	-0.079	4.364	0.85798	1.00000
RegenerationBL	-0.819	4.364	0.09281	0.35804
RegenerationTP	-0.18	4.364	0.70787	1.00000

Genes with expression patterns similar to MligTC455_40536

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40536	837	17.43	Mlig455_045210	Neo: - Age: Down-Up-Up	GID4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_045210 {REF} {Length: 575} {TRANSSPLICED} {Pfam: Vacuolar import and degradation protein [PF09783.11, score=163.7]} {Human: ENSG00000141034, GID4, GID complex subunit 4 homolog, [RH, Score=197, Expect=1e-62]} {Mouse: ENSMUSG00000018415, Gid4, GID complex subunit 4, VID24 homolog, [RH, Score=199, Expect=8e-65]} {Smed: dd_Smed_v6_2974_0_1, dd_Smed_v6_2974_0_1, [RH, Score=113, Expect=2e-31]} {RNA1509_43603} {RNA1310_19703.1} {RNA815_17188.1}
2.	MligTC455_49071	1009	21.02	Mlig455_033502, Mlig455_033505, Mlig455_069235	Neo: - Age: Down-Up-Down Region-enriched R4: 1.777/0.00192	FOPNL	1.828	-	-	-	-	0.867	0.961	Mlig455_033502 {REF} {Length: 2172} {TRANSSPLICED} {Pfam: FOP N terminal dimerisation domain [PF09398.12, score=57.2]; LisH [PF16045.7, score=22.9]} {Human: ENSG00000276914, FOPNL, FGFR1OP N-terminal like, [RH, Score=125, Expect=6e-37]; ENSG00000133393, FOPNL, FGFR1OP N-terminal like, [RH, Score=125, Expect=6e-37]} {Mouse: ENSMUSG00000022677, Fopnl, Fgfr1op N-terminal like, [RH, Score=130, Expect=4e-39]} {Smed: dd_Smed_v6_10047_0_1, dd_Smed_v6_10047_0_1, [RH, Score=122, Expect=8e-36]} {RNA1509_18846} {RNA1310_21832} {RNA815_27387} Mlig455_033505 {REF} {Length: 1889} {Pfam: FOP N terminal dimerisation domain [PF09398.12, score=57.2]; LisH [PF16045.7, score=22.9]} {Human: ENSG00000276914, FOPNL, FGFR1OP N-terminal like, [RH, Score=125, Expect=6e-37]; ENSG00000133393, FOPNL, FGFR1OP N-terminal like, [RH, Score=125, Expect=6e-37]} {Mouse: ENSMUSG00000022677, Fopnl, Fgfr1op N-terminal like, [RH, Score=130, Expect=4e-39]} {Smed: dd_Smed_v6_10047_0_1, dd_Smed_v6_10047_0_1, [RH, Score=122, Expect=8e-36]} {RNA1509_18846} {RNA1310_21832} {RNA815_27387} Mlig455_069235 {REF} {Length: 2088} {TRANSSPLICED} {Pfam: FOP N terminal dimerisation domain [PF09398.12, score=57.2]; LisH [PF16045.7, score=22.9]} {Human: ENSG00000276914, FOPNL, FGFR1OP N-terminal like, [RH, Score=125, Expect=6e-37]; ENSG00000133393, FOPNL, FGFR1OP N-terminal like, [RH, Score=125, Expect=6e-37]} {Mouse: ENSMUSG00000022677, Fopnl, Fgfr1op N-terminal like, [RH, Score=130, Expect=4e-39]} {Smed: dd_Smed_v6_10047_0_1, dd_Smed_v6_10047_0_1, [RH, Score=122, Expect=8e-36]} {RNA1509_18846, RNA1509_20340} {RNA1310_21832, RNA1509_18846, RNA1509_20340} {RNA1509_18846, RNA1509_20340, RNA815_27387}
3.	MligTC455_18030	843	17.56	Mlig455_026474	Neo: - Age: Down-Up-Up	TMEM222	1.809	-	-	-	0.858	-	0.951	Mlig455_026474 {REF} {Length: 615} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF778) [PF05608.14, score=118.5]} {Human: ENSG00000186501, TMEM222, transmembrane protein 222, [Score=150, Expect=3e-47]} {Mouse: ENSMUSG00000028857, Tmem222, transmembrane protein 222, [Score=145, Expect=1e-44]} {Dmel: FBgn0032000, CG8372, [Score=122, Expect=2e-36]} {Celegans: WBGene00019221, H20J04.6, [Score=130, Expect=1e-39]} {Smed: dd_Smed_v6_1946_0_2, dd_Smed_v6_1946_0_2, [Score=146, Expect=3e-46]} {RNA1509_49710} {RNA1310_49082.2} {RNA815_25018.1}
4.	MligTC455_53861	286	5.95	Mlig455_028801	Neo: - Age: -		1.73	-	-	0.777	0.953	-	-	Mlig455_028801 {REF} {Length: 1486} {Smed: dd_Smed_v6_5631_0_1, dd_Smed_v6_5631_0_1, [Score=54.7, Expect=5e-08]} {RNA1310_25486.1} {RNA815_31068}
5.	MligTC455_45212	287	5.97	Mlig455_023937	Neo: - Age: -	TFAP4	1.681	-	-	-	-	0.713	0.968	Mlig455_023937 {REF} {Length: 2526} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=67.6]} {Human: ENSG00000090447, TFAP4, transcription factor AP-4, [RH, Score=90.5, Expect=1e-19]} {Mouse: ENSMUSG00000005718, Tfap4, transcription factor AP4, [RH, Score=90.9, Expect=6e-20]} {Dmel: FBgn0001994, crp, cropped, [RH, Score=92.8, Expect=3e-20]} {Celegans: WBGene00001955, hlh-11, Helix-loop-helix protein 11, [RH, Score=83.2, Expect=3e-17]} {Smed: dd_Smed_v6_8205_0_1, dd_Smed_v6_8205_0_1, [RH, Score=90.9, Expect=2e-20]} {RNA1509_12849, RNA1509_21993} {RNA1310_9423.1, RNA1509_21993} {RNA1509_21993, RNA815_7350.2}
6.	MligTC455_21294	1145	23.85	Mlig455_023594, Mlig455_068111	Neo: - Age: Down-Up-Down	AMMECR1L	0.978	-	-	-	-	-	0.978	Mlig455_023594 {REF} {Length: 2930} {TRANSSPLICED} {Pfam: AMMECR1 [PF01871.19, score=135.8]} {Human: ENSG00000144233, AMMECR1L, AMMECR1 like, [Score=198, Expect=1e-62]; ENSG00000101935, AMMECR1, Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1, [Score=194, Expect=1e-62]} {Mouse: ENSMUSG00000041915, Ammecr1l, AMME chromosomal region gene 1-like, [Score=199, Expect=3e-63]; ENSMUSG00000042225, Ammecr1, Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1, [Score=195, Expect=3e-61]} {Dmel: FBgn0039136, CG5902, [Score=192, Expect=1e-61]} {Celegans: WBGene00011303, R166.3, [Score=144, Expect=2e-43]} {Smed: dd_Smed_v6_1660_0_5, dd_Smed_v6_1660_0_5, [Score=194, Expect=2e-62]} {RNA1509_15301} {RNA1310_10511.2} {RNA815_25902} Mlig455_068111 {REF} {Length: 2971} {Pfam: AMMECR1 [PF01871.19, score=122.5]} {Human: ENSG00000144233, AMMECR1L, AMMECR1 like, [Score=219, Expect=7e-71]; ENSG00000101935, AMMECR1, Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1, [Score=214, Expect=2e-68]} {Mouse: ENSMUSG00000041915, Ammecr1l, AMME chromosomal region gene 1-like, [Score=220, Expect=2e-71]; ENSMUSG00000042225, Ammecr1, Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1, [Score=214, Expect=2e-68]} {Dmel: FBgn0039136, CG5902, [Score=201, Expect=5e-65]} {Celegans: WBGene00011303, R166.3, [Score=162, Expect=2e-50]} {Smed: dd_Smed_v6_1660_0_5, dd_Smed_v6_1660_0_5, [Score=209, Expect=2e-68]} {RNA1509_13941} {RNA1310_10511.2} {RNA815_9367}
7.	MligTC455_48200	5445	113.43	Mlig455_036804, Mlig455_052940, Mlig455_053010	Neo: - Age: -		0.971	-	-	-	-	-	0.971	Mlig455_036804 {REF} {Length: 2320} {RNA1509_3788} {RNA1310_16652, RNA1509_3788} {RNA1509_3788, RNA815_6668} Mlig455_052940 {REF} {Length: 1832} {RNA1509_3788} {RNA1310_16652} {RNA815_6668} Mlig455_053010 {REF} {Length: 1919} {RNA1509_3788} {RNA1310_16652} {RNA815_6668}
8.	MligTC455_44117	825	17.19	Mlig455_002829	Neo: Int S/G2/M Age: - Region-enriched R5: 1.090/0.00969	TENT2	0.966	-	-	-	0.966	-	-	Mlig455_002829 {REF} {Length: 1523} {TRANSSPLICED} {Pfam: TUTase nucleotidyltransferase domain [PF19088.2, score=69.9]; Cid1 family poly A polymerase [PF03828.21, score=42.3]} {Human: ENSG00000164329, TENT2, terminal nucleotidyltransferase 2, [RH, Score=225, Expect=6e-68]} {Mouse: ENSMUSG00000042167, Tent2, terminal nucleotidyltransferase 2, [RH, Score=221, Expect=3e-66]} {Dmel: FBgn0038934, Gld2, GLD2 poly(A) polymerase, [RH, Score=227, Expect=6e-65]} {Celegans: WBGene00001596, gld-2, Poly(A) RNA polymerase gld-2, [RH, Score=222, Expect=4e-64]} {Smed: dd_Smed_v6_28587_0_1, dd_Smed_v6_28587_0_1, [RH, Score=391, Expect=2e-126]} {RNA1509_34801} {RNA1310_20023, RNA1509_34801} {RNA1509_34801, RNA815_13106}
9.	MligTC455_48446	2442	50.86	Mlig455_048051, Mlig455_048069	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.311	SF3B5	0.961	-	-	-	-	-	0.961	Mlig455_048051 {REF} {Length: 472} {TRANSSPLICED} {Pfam: Splicing factor 3B subunit 10 (SF3b10) [PF07189.13, score=132.8]} {Human: ENSG00000169976, SF3B5, splicing factor 3b subunit 5, [RH, Score=141, Expect=2e-45]} {Mouse: ENSMUSG00000078348, Sf3b5, splicing factor 3b, subunit 5, [RH, Score=138, Expect=2e-44]} {Dmel: FBgn0040534, Sf3b5, Splicing factor 3b subunit 5, [RH, Score=152, Expect=7e-50]} {Smed: dd_Smed_v6_2023_0_1, dd_Smed_v6_2023_0_1, [RH, Score=137, Expect=3e-44]} {RNA1509_22949, RNA1509_32675, RNA1509_36002, RNA1509_38643, RNA1509_46341} {RNA1310_70901, RNA1509_22949, RNA1509_32675, RNA1509_36002, RNA1509_38643, RNA1509_46341} {RNA1509_22949, RNA1509_32675, RNA1509_36002, RNA1509_38643, RNA1509_46341, RNA815_11555.3} Mlig455_048069 {REF} {Length: 476} {TRANSSPLICED} {Pfam: Splicing factor 3B subunit 10 (SF3b10) [PF07189.13, score=132.8]} {Human: ENSG00000169976, SF3B5, splicing factor 3b subunit 5, [RH, Score=141, Expect=2e-45]} {Mouse: ENSMUSG00000078348, Sf3b5, splicing factor 3b, subunit 5, [RH, Score=138, Expect=2e-44]} {Dmel: FBgn0040534, Sf3b5, Splicing factor 3b subunit 5, [RH, Score=152, Expect=7e-50]} {Smed: dd_Smed_v6_2023_0_1, dd_Smed_v6_2023_0_1, [RH, Score=137, Expect=3e-44]} {RNA1509_46341} {RNA1310_70901} {RNA815_11555.3}
10.	MligTC455_52302	1158	24.12	Mlig455_057337	Neo: - Age: -	PPP2R5A	0.958	-	-	-	-	-	0.958	Mlig455_057337 {REF} {Length: 3320} {TRANSSPLICED} {Pfam: Protein phosphatase 2A regulatory B subunit (B56 family) [PF01603.22, score=587.3]} {Human: ENSG00000066027, PPP2R5A, protein phosphatase 2 regulatory subunit B'alpha, [RH, Score=670, Expect=0.0]; ENSG00000154001, PPP2R5E, protein phosphatase 2 regulatory subunit B'epsilon, [RH, Score=653, Expect=0.0]} {Mouse: ENSMUSG00000026626, Ppp2r5a, protein phosphatase 2, regulatory subunit B', alpha, [RH, Score=680, Expect=0.0]; ENSMUSG00000021051, Ppp2r5e, protein phosphatase 2, regulatory subunit B', epsilon, [RH, Score=654, Expect=0.0]} {Dmel: FBgn0027492, wdb, widerborst, [RH, Score=684, Expect=0.0]} {Celegans: WBGene00012348, pptr-1, Serine/threonine-protein phosphatase 2A regulatory subunit pptr-1, [RH, Score=640, Expect=0.0]} {Smed: dd_Smed_v6_2613_0_4, dd_Smed_v6_2613_0_4, [RH, Score=716, Expect=0.0]} {RNA1509_13623, RNA1509_27958, RNA1509_3099, RNA1509_36347} {RNA1310_4841, RNA1509_13623, RNA1509_27958, RNA1509_3099, RNA1509_36347} {RNA1509_13623, RNA1509_27958, RNA1509_3099, RNA1509_36347, RNA815_2935}
11.	MligTC455_50126	980	20.41	Mlig455_004449	Neo: - Age: Up-Down-Up	DNASE2B	0.957	-	-	-	0.957	-	-	Mlig455_004449 {REF} {Length: 2175} {Pfam: Deoxyribonuclease II [PF03265.17, score=271.3]} {Human: ENSG00000137976, DNASE2B, deoxyribonuclease 2 beta, [RH, Score=165, Expect=1e-45]; ENSG00000105612, DNASE2, deoxyribonuclease 2, lysosomal, [RH, Score=164, Expect=3e-45]} {Mouse: ENSMUSG00000003812, Dnase2a, deoxyribonuclease II alpha, [RH, Score=172, Expect=9e-49]} {Dmel: FBgn0000477, DNaseII, Deoxyribonuclease II, [RH, Score=135, Expect=7e-35]} {Celegans: WBGene00003828, nuc-1, Deoxyribonuclease-2, [RH, Score=175, Expect=1e-49]} {Smed: dd_Smed_v6_1643_0_1, dd_Smed_v6_1643_0_1, [RH, Score=178, Expect=2e-51]} {RNA1509_8025} {RNA1310_8215.2} {RNA815_4592.1}
12.	MligTC455_46559	1484	30.91	Mlig455_056465	Neo: - Age: logFC(26M/2M)=-0.295	TANC1	0.956	-	-	-	-	0.956	-	Mlig455_056465 {REF} {Length: 2067} {Pfam: Ankyrin repeats (many copies) [PF13857.8, score=50.7]; Ankyrin repeats (3 copies) [PF12796.9, score=48.4]; Ankyrin repeat [PF13606.8, score=41.8]; Ankyrin repeats (many copies) [PF13637.8, score=41.1]; Ankyrin repeat [PF00023.32, score=36.6]} {Human: ENSG00000115183, TANC1, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1, [Score=57.0, Expect=5e-08]; ENSG00000145362, ANK2, ankyrin 2, [Score=57.0, Expect=5e-08]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=55.8, Expect=9e-08]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=58.2, Expect=1e-08]} {Smed: dd_Smed_v6_13251_0_1, dd_Smed_v6_13251_0_1, [Score=53.1, Expect=1e-07]} {RNA1509_19702, RNA1509_36019, RNA1509_36843, RNA1509_6963} {RNA1310_14830, RNA1509_36019, RNA1509_36843, RNA1509_6963} {RNA1509_36019, RNA1509_36843, RNA1509_6963, RNA815_5101}
13.	MligTC455_47328	471	9.82	Mlig455_025846, Mlig455_025907	Neo: - Age: logFC(26M/2M)=0.517	DSTYK	0.952	-	-	-	0.952	-	-	Mlig455_025846 {REF} {Length: 3841} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=89.9]; Protein kinase domain [PF00069.27, score=81.5]; Dynamin family [PF00350.25, score=72.6]; 50S ribosome-binding GTPase [PF01926.25, score=31.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=22.9]} {Human: ENSG00000133059, DSTYK, dual serine/threonine and tyrosine protein kinase, [Score=164, Expect=9e-41]} {Mouse: ENSMUSG00000042046, Dstyk, dual serine/threonine and tyrosine protein kinase, [Score=180, Expect=3e-46]} {Dmel: FBgn0000826, png, pan gu, [Score=70.5, Expect=1e-12]} {Celegans: WBGene00000812, csk-1, Tyrosine-protein kinase csk-1, [Score=72.0, Expect=1e-12]} {Smed: dd_Smed_v6_1371_0_1, dd_Smed_v6_1371_0_1, [Score=359, Expect=2e-109]} {RNA1509_5996} {RNA1310_2101.1} {RNA815_1774} Mlig455_025907 {REF} {Length: 3323} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=89.9]; Protein kinase domain [PF00069.27, score=81.5]; Dynamin family [PF00350.25, score=72.6]; 50S ribosome-binding GTPase [PF01926.25, score=31.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=22.9]} {Human: ENSG00000133059, DSTYK, dual serine/threonine and tyrosine protein kinase, [Score=164, Expect=9e-41]} {Mouse: ENSMUSG00000042046, Dstyk, dual serine/threonine and tyrosine protein kinase, [Score=180, Expect=3e-46]} {Dmel: FBgn0000826, png, pan gu, [Score=70.1, Expect=1e-12]} {Celegans: WBGene00000812, csk-1, Tyrosine-protein kinase csk-1, [Score=72.0, Expect=1e-12]} {Smed: dd_Smed_v6_1371_0_1, dd_Smed_v6_1371_0_1, [Score=361, Expect=7e-110]} {RNA1509_5996} {RNA1310_2101.1} {RNA815_1774}
14.	MligTC455_44773	344	7.16	Mlig455_056369	Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 2.057/0.01861		0.951	-	-	-	0.951	-	-	Mlig455_056369 {REF} {Length: 2569} {TRANSSPLICED} {RNA1509_31340, RNA1509_40584} {RNA1310_41204, RNA1509_31340, RNA1509_40584} {RNA1509_31340, RNA1509_40584, RNA815_47747}
15.	MligTC455_52586	230	4.78	Mlig455_069158	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_069158 {REF} {Length: 3154} {RNA1509_45748, RNA1509_55217} {RNA1310_4688.1, RNA1509_45748} {RNA1509_45748, RNA815_38425}
16.	MligTC455_51068	640	13.33	Mlig455_047605	Neo: - Age: - Region-enriched R3: 1.450/0.00092		0.95	-	-	-	-	-	0.950	Mlig455_047605 {REF} {Length: 2440} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=26.2]} {Smed: dd_Smed_v6_2114_0_1, dd_Smed_v6_2114_0_1, [RH, Score=132, Expect=2e-36]} {RNA1509_4047} {RNA1310_27835.1} {RNA815_11823}

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