TomoSeq data search

Data search

Results for MligTC455_48446

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48446

2442

50.86

Mlig455_048051, Mlig455_048069

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.311

SF3B5

Mlig455_048051 {REF} {Length: 472} {TRANSSPLICED} {Pfam: Splicing factor 3B subunit 10 (SF3b10) [PF07189.13, score=132.8]} {Human: ENSG00000169976, SF3B5, splicing factor 3b subunit 5, [RH, Score=141, Expect=2e-45]} {Mouse: ENSMUSG00000078348, Sf3b5, splicing factor 3b, subunit 5, [RH, Score=138, Expect=2e-44]} {Dmel: FBgn0040534, Sf3b5, Splicing factor 3b subunit 5, [RH, Score=152, Expect=7e-50]} {Smed: dd_Smed_v6_2023_0_1, dd_Smed_v6_2023_0_1, [RH, Score=137, Expect=3e-44]} {RNA1509_22949, RNA1509_32675, RNA1509_36002, RNA1509_38643, RNA1509_46341} {RNA1310_70901, RNA1509_22949, RNA1509_32675, RNA1509_36002, RNA1509_38643, RNA1509_46341} {RNA1509_22949, RNA1509_32675, RNA1509_36002, RNA1509_38643, RNA1509_46341, RNA815_11555.3}

Mlig455_048069 {REF} {Length: 476} {TRANSSPLICED} {Pfam: Splicing factor 3B subunit 10 (SF3b10) [PF07189.13, score=132.8]} {Human: ENSG00000169976, SF3B5, splicing factor 3b subunit 5, [RH, Score=141, Expect=2e-45]} {Mouse: ENSMUSG00000078348, Sf3b5, splicing factor 3b, subunit 5, [RH, Score=138, Expect=2e-44]} {Dmel: FBgn0040534, Sf3b5, Splicing factor 3b subunit 5, [RH, Score=152, Expect=7e-50]} {Smed: dd_Smed_v6_2023_0_1, dd_Smed_v6_2023_0_1, [RH, Score=137, Expect=3e-44]} {RNA1509_46341} {RNA1310_70901} {RNA815_11555.3}

Cumulative graph for MligTC455_48446

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.453	5.836	0.06060	0.56374
RegionR2	0.111	5.836	0.76834	1.00000
RegionR3	0.221	5.836	0.47360	0.97873
RegionR4	0.536	5.836	0.13970	0.38150
RegionR5	0.742	5.836	0.00897	0.05334
RegionR6	-0.043	5.836	0.89211	1.00000
RegionR7	0.293	5.836	0.38043	1.00000
RegionR8	-0.409	5.836	0.31999	0.95407

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.276	5.836	0.81499	1.00000
RegenerationR2	-0.379	5.836	0.28878	0.73178
RegenerationR3	-0.165	5.836	0.66327	0.93441
RegenerationR4	0.129	5.836	0.74113	0.96776
RegenerationR5	0.208	5.836	0.56420	0.89368
RegenerationR6	0.226	5.836	0.55874	0.84447
RegenerationBL	0.114	5.836	0.76409	1.00000
RegenerationTP	0.383	5.836	0.33903	0.78249

Genes with expression patterns similar to MligTC455_48446

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48446	2442	50.86	Mlig455_048051, Mlig455_048069	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.311	SF3B5	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_048051 {REF} {Length: 472} {TRANSSPLICED} {Pfam: Splicing factor 3B subunit 10 (SF3b10) [PF07189.13, score=132.8]} {Human: ENSG00000169976, SF3B5, splicing factor 3b subunit 5, [RH, Score=141, Expect=2e-45]} {Mouse: ENSMUSG00000078348, Sf3b5, splicing factor 3b, subunit 5, [RH, Score=138, Expect=2e-44]} {Dmel: FBgn0040534, Sf3b5, Splicing factor 3b subunit 5, [RH, Score=152, Expect=7e-50]} {Smed: dd_Smed_v6_2023_0_1, dd_Smed_v6_2023_0_1, [RH, Score=137, Expect=3e-44]} {RNA1509_22949, RNA1509_32675, RNA1509_36002, RNA1509_38643, RNA1509_46341} {RNA1310_70901, RNA1509_22949, RNA1509_32675, RNA1509_36002, RNA1509_38643, RNA1509_46341} {RNA1509_22949, RNA1509_32675, RNA1509_36002, RNA1509_38643, RNA1509_46341, RNA815_11555.3} Mlig455_048069 {REF} {Length: 476} {TRANSSPLICED} {Pfam: Splicing factor 3B subunit 10 (SF3b10) [PF07189.13, score=132.8]} {Human: ENSG00000169976, SF3B5, splicing factor 3b subunit 5, [RH, Score=141, Expect=2e-45]} {Mouse: ENSMUSG00000078348, Sf3b5, splicing factor 3b, subunit 5, [RH, Score=138, Expect=2e-44]} {Dmel: FBgn0040534, Sf3b5, Splicing factor 3b subunit 5, [RH, Score=152, Expect=7e-50]} {Smed: dd_Smed_v6_2023_0_1, dd_Smed_v6_2023_0_1, [RH, Score=137, Expect=3e-44]} {RNA1509_46341} {RNA1310_70901} {RNA815_11555.3}
2.	MligTC455_38155	6757	140.77	Mlig455_059602, Mlig455_070948	Neo: Int S/G2/M Age: - Region-enriched R5: 1.389/0.00001 Region-enriched R4: 1.020/0.01836		2.443	-	-	-	0.952	0.705	0.786	Mlig455_059602 {REF} {Length: 532} {TRANSSPLICED} {Pfam: TOM7 family [PF08038.14, score=37.2]} {Dmel: FBgn0033357, Tom7, Translocase of outer membrane 7, [RH, Score=55.1, Expect=5e-12]} {RNA1509_9224} {RNA1310_40020} {RNA815_32819.2} Mlig455_070948 {REF} {Length: 532} {TRANSSPLICED} {Pfam: TOM7 family [PF08038.14, score=37.2]} {Dmel: FBgn0033357, Tom7, Translocase of outer membrane 7, [RH, Score=55.1, Expect=5e-12]} {RNA1509_53876, RNA1509_5586, RNA1509_7708, RNA1509_9224} {RNA1310_40020, RNA1509_53876, RNA1509_5586, RNA1509_7708, RNA1509_9224} {RNA1509_53876, RNA1509_5586, RNA1509_7708, RNA1509_9224, RNA815_32819.2}
3.	MligTC455_22274	2011	41.9	Mlig455_038507	Neo: - Age: logFC(26M/2M)=0.411 Region-enriched R5: 1.184/0.00316	PKM	0.965	-	-	-	0.965	-	-	Mlig455_038507 {REF} {Length: 2462} {TRANSSPLICED} {Pfam: Pyruvate kinase, barrel domain [PF00224.23, score=532.2]; Pyruvate kinase, alpha/beta domain [PF02887.18, score=107.6]; HpcH/HpaI aldolase/citrate lyase family [PF03328.16, score=22.4]} {Human: ENSG00000067225, PKM, pyruvate kinase M1/2, [RH, Score=702, Expect=0.0]; ENSG00000143627, PKLR, pyruvate kinase L/R, [RH, Score=670, Expect=0.0]; ENSG00000262785, PKLR, pyruvate kinase L/R, [RH, Score=670, Expect=0.0]} {Mouse: ENSMUSG00000032294, Pkm, pyruvate kinase, muscle, [RH, Score=700, Expect=0.0]} {Dmel: FBgn0267385, PyK, Pyruvate kinase, [RH, Score=661, Expect=0.0]} {Celegans: WBGene00009126, pyk-1, Pyruvate kinase, [RH, Score=641, Expect=0.0]} {Smed: dd_Smed_v6_605_0_1, dd_Smed_v6_605_0_1, [RH, Score=770, Expect=0.0]} {RNA1509_13634, RNA1509_1681, RNA1509_32740} {RNA1310_7731.1, RNA1509_13634, RNA1509_1681, RNA1509_32740} {RNA1509_13634, RNA1509_1681, RNA1509_32740, RNA815_3516.1}
4.	MligTC455_40536	837	17.43	Mlig455_045210	Neo: - Age: Down-Up-Up	GID4	0.961	-	-	-	-	-	0.961	Mlig455_045210 {REF} {Length: 575} {TRANSSPLICED} {Pfam: Vacuolar import and degradation protein [PF09783.11, score=163.7]} {Human: ENSG00000141034, GID4, GID complex subunit 4 homolog, [RH, Score=197, Expect=1e-62]} {Mouse: ENSMUSG00000018415, Gid4, GID complex subunit 4, VID24 homolog, [RH, Score=199, Expect=8e-65]} {Smed: dd_Smed_v6_2974_0_1, dd_Smed_v6_2974_0_1, [RH, Score=113, Expect=2e-31]} {RNA1509_43603} {RNA1310_19703.1} {RNA815_17188.1}
5.	MligTC455_29562	14497	302.02	Mlig455_065040	Neo: Int S/G2/M Age: -	RPS15	0.959	-	-	-	0.959	-	-	Mlig455_065040 {REF} {Length: 549} {TRANSSPLICED} {Pfam: Ribosomal protein S19 [PF00203.23, score=115.8]} {Human: ENSG00000115268, RPS15, ribosomal protein S15, [RH, Score=206, Expect=4e-69]} {Mouse: ENSMUSG00000063457, Rps15, ribosomal protein S15, [RH, Score=206, Expect=3e-69]} {Dmel: FBgn0034138, RpS15, Ribosomal protein S15, [RH, Score=199, Expect=1e-66]} {Celegans: WBGene00004484, rps-15, 40S ribosomal protein S15, [RH, Score=205, Expect=5e-69]} {Smed: dd_Smed_v6_201_0_1, dd_Smed_v6_201_0_1, [RH, Score=213, Expect=3e-72]} {RNA1509_1947} {RNA1310_64649} {RNA815_29108.2}
6.	MligTC455_49071	1009	21.02	Mlig455_033502, Mlig455_033505, Mlig455_069235	Neo: - Age: Down-Up-Down Region-enriched R4: 1.777/0.00192	FOPNL	0.959	-	-	-	-	-	0.959	Mlig455_033502 {REF} {Length: 2172} {TRANSSPLICED} {Pfam: FOP N terminal dimerisation domain [PF09398.12, score=57.2]; LisH [PF16045.7, score=22.9]} {Human: ENSG00000276914, FOPNL, FGFR1OP N-terminal like, [RH, Score=125, Expect=6e-37]; ENSG00000133393, FOPNL, FGFR1OP N-terminal like, [RH, Score=125, Expect=6e-37]} {Mouse: ENSMUSG00000022677, Fopnl, Fgfr1op N-terminal like, [RH, Score=130, Expect=4e-39]} {Smed: dd_Smed_v6_10047_0_1, dd_Smed_v6_10047_0_1, [RH, Score=122, Expect=8e-36]} {RNA1509_18846} {RNA1310_21832} {RNA815_27387} Mlig455_033505 {REF} {Length: 1889} {Pfam: FOP N terminal dimerisation domain [PF09398.12, score=57.2]; LisH [PF16045.7, score=22.9]} {Human: ENSG00000276914, FOPNL, FGFR1OP N-terminal like, [RH, Score=125, Expect=6e-37]; ENSG00000133393, FOPNL, FGFR1OP N-terminal like, [RH, Score=125, Expect=6e-37]} {Mouse: ENSMUSG00000022677, Fopnl, Fgfr1op N-terminal like, [RH, Score=130, Expect=4e-39]} {Smed: dd_Smed_v6_10047_0_1, dd_Smed_v6_10047_0_1, [RH, Score=122, Expect=8e-36]} {RNA1509_18846} {RNA1310_21832} {RNA815_27387} Mlig455_069235 {REF} {Length: 2088} {TRANSSPLICED} {Pfam: FOP N terminal dimerisation domain [PF09398.12, score=57.2]; LisH [PF16045.7, score=22.9]} {Human: ENSG00000276914, FOPNL, FGFR1OP N-terminal like, [RH, Score=125, Expect=6e-37]; ENSG00000133393, FOPNL, FGFR1OP N-terminal like, [RH, Score=125, Expect=6e-37]} {Mouse: ENSMUSG00000022677, Fopnl, Fgfr1op N-terminal like, [RH, Score=130, Expect=4e-39]} {Smed: dd_Smed_v6_10047_0_1, dd_Smed_v6_10047_0_1, [RH, Score=122, Expect=8e-36]} {RNA1509_18846, RNA1509_20340} {RNA1310_21832, RNA1509_18846, RNA1509_20340} {RNA1509_18846, RNA1509_20340, RNA815_27387}
7.	MligTC455_18030	843	17.56	Mlig455_026474	Neo: - Age: Down-Up-Up	TMEM222	0.956	-	-	-	-	-	0.956	Mlig455_026474 {REF} {Length: 615} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF778) [PF05608.14, score=118.5]} {Human: ENSG00000186501, TMEM222, transmembrane protein 222, [Score=150, Expect=3e-47]} {Mouse: ENSMUSG00000028857, Tmem222, transmembrane protein 222, [Score=145, Expect=1e-44]} {Dmel: FBgn0032000, CG8372, [Score=122, Expect=2e-36]} {Celegans: WBGene00019221, H20J04.6, [Score=130, Expect=1e-39]} {Smed: dd_Smed_v6_1946_0_2, dd_Smed_v6_1946_0_2, [Score=146, Expect=3e-46]} {RNA1509_49710} {RNA1310_49082.2} {RNA815_25018.1}
8.	MligTC455_48158	1181	24.61	Mlig455_031524	Neo: - Age: Down-Up-Down Region-enriched R6: 1.822/0.02959 Region-enriched R5: 1.446/0.02417		0.956	-	-	-	0.956	-	-	Mlig455_031524 {REF} {Length: 2805} {Pfam: Methyltransferase domain [PF13649.8, score=123.0]; Methyltransferase domain [PF13847.8, score=121.7]; Methyltransferase domain [PF08241.14, score=121.3]; Methyltransferase domain [PF08242.14, score=96.6]; Methyltransferase domain [PF13489.8, score=84.4]; Nodulation protein S (NodS) [PF05401.13, score=54.7]; ubiE/COQ5 methyltransferase family [PF01209.20, score=48.6]; AdoMet dependent proline di-methyltransferase [PF05891.14, score=41.9]; Mycolic acid cyclopropane synthetase [PF02353.22, score=40.2]; CheR methyltransferase, SAM binding domain [PF01739.20, score=37.5]; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) [PF01135.21, score=31.2]; Methyltransferase small domain [PF05175.16, score=28.5]; Tellurite resistance protein TehB [PF03848.16, score=28.3]; Putative methyltransferase [PF02390.19, score=26.1]; Methionine biosynthesis protein MetW [PF07021.14, score=21.1]; Methyltransferase domain [PF13679.8, score=19.9]; Ribosomal RNA adenine dimethylase [PF00398.22, score=18.7]} {Dmel: FBgn0033457, Ntmt, N-terminal methyltransferase, [Score=50.1, Expect=1e-06]} {Celegans: WBGene00022781, pmt-1, Phosphoethanolamine MethylTransferase, [RH, Score=138, Expect=8e-36]} {RNA1509_10733, RNA1509_3948, RNA1509_42988, RNA1509_46546, RNA1509_49282} {RNA1310_9159.2, RNA1509_10733, RNA1509_3948, RNA1509_42988, RNA1509_46546, RNA1509_49282} {RNA1509_10733, RNA1509_3948, RNA1509_42988, RNA1509_46546, RNA1509_49282, RNA815_3072.1}

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