Data search
Results for MligTC455_40702
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40702 | 209 | 4.36 | Mlig455_030731 | Neo: - Age: - Region-enriched R5: 2.434/0.02879 |
Mlig455_030731 {REF} {Length: 2863} {TRANSSPLICED} {Pfam: Leucine Rich Repeat [PF00560.35, score=25.4]} {RNA1509_28290, RNA1509_34243} {RNA1310_14147, RNA1509_34243} {RNA1509_34243, RNA815_4034.1} |
Cumulative graph for MligTC455_40702
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -9.308 | 2.802 | 0.01051 | 0.29967 | |
| RegionR2 | 2.489 | 2.802 | 0.03665 | 0.22119 | |
| RegionR3 | 2.667 | 2.802 | 0.00546 | 0.10119 | |
| RegionR4 | -0.659 | 2.802 | 0.97049 | 1.00000 | |
| RegionR5 | 2.434 | 2.802 | 0.00390 | 0.02879 | |
| RegionR6 | 1.965 | 2.802 | 0.04351 | 0.39073 | |
| RegionR7 | -0.24 | 2.802 | 0.92024 | 1.00000 | |
| RegionR8 | 0.652 | 2.802 | 0.61741 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.462 | 2.802 | 1.00000 | 1.00000 | |
| RegenerationR2 | -0.578 | 2.802 | 0.49416 | 0.86892 | |
| RegenerationR3 | -0.458 | 2.802 | 0.60105 | 0.90847 | |
| RegenerationR4 | 1.306 | 2.802 | 0.14874 | 0.57601 | |
| RegenerationR5 | 0.358 | 2.802 | 0.63591 | 0.92496 | |
| RegenerationR6 | -0.018 | 2.802 | 0.99222 | 1.00000 | |
| RegenerationBL | 0.158 | 2.802 | 0.88630 | 1.00000 | |
| RegenerationTP | 0.349 | 2.802 | 0.78416 | 1.00000 |
Genes with expression patterns similar to MligTC455_40702
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40702 | 209 | 4.36 | Mlig455_030731 | Neo: - Age: - Region-enriched R5: 2.434/0.02879 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_030731 {REF} {Length: 2863} {TRANSSPLICED} {Pfam: Leucine Rich Repeat [PF00560.35, score=25.4]} {RNA1509_28290, RNA1509_34243} {RNA1310_14147, RNA1509_34243} {RNA1509_34243, RNA815_4034.1} | |
| 2. | MligTC455_52818 | 520 | 10.84 | Mlig455_022841 | Neo: Int S/G2/M |
IMPDH1 | 1.705 | 0.952 | - | - | - | - | 0.753 | Mlig455_022841 {REF} {Length: 3806} {Pfam: IMP dehydrogenase / GMP reductase domain [PF00478.27, score=449.3]; Nitronate monooxygenase [PF03060.17, score=56.0]; CBS domain [PF00571.30, score=41.5]; FMN-dependent dehydrogenase [PF01070.20, score=40.6]; Histidine biosynthesis protein [PF00977.23, score=27.4]; Thiazole biosynthesis protein ThiG [PF05690.16, score=18.4]} {Human: ENSG00000106348, IMPDH1, inosine monophosphate dehydrogenase 1, [RH, Score=790, Expect=0.0]; ENSG00000178035, IMPDH2, inosine monophosphate dehydrogenase 2, [RH, Score=776, Expect=0.0]} {Mouse: ENSMUSG00000003500, Impdh1, inosine monophosphate dehydrogenase 1, [RH, Score=785, Expect=0.0]; ENSMUSG00000062867, Impdh2, inosine monophosphate dehydrogenase 2, [RH, Score=773, Expect=0.0]} {Dmel: FBgn0003204, ras, raspberry, [RH, Score=709, Expect=0.0]} {Celegans: WBGene00020682, T22D1.3, Inosine-5'-monophosphate dehydrogenase, [RH, Score=543, Expect=0.0]} {Smed: dd_Smed_v6_4321_0_2, dd_Smed_v6_4321_0_2, [RH, Score=755, Expect=0.0]} {RNA1509_4134, RNA1509_47560} {RNA1310_8483.1, RNA1509_47560} {RNA1509_47560, RNA815_4082} |
| 3. | MligTC455_18074 | 308 | 6.41 | Mlig455_007066 | Neo: - Age: - Region-enriched R5: 1.938/0.00132 |
CROT | 1.7 | - | - | - | - | 0.749 | 0.951 | Mlig455_007066 {REF} {Length: 2615} {TRANSSPLICED} {Pfam: Choline/Carnitine o-acyltransferase [PF00755.22, score=415.8]} {Human: ENSG00000005469, CROT, carnitine O-octanoyltransferase, [RH, Score=407, Expect=7e-134]} {Mouse: ENSMUSG00000003623, Crot, carnitine O-octanoyltransferase, [RH, Score=405, Expect=3e-133]} {Dmel: FBgn0039543, CG12428, [RH, Score=293, Expect=2e-90]} {Celegans: WBGene00011850, T20B3.1, [RH, Score=274, Expect=2e-83]} {Smed: dd_Smed_v6_11465_0_2, dd_Smed_v6_11465_0_2, [RH, Score=293, Expect=2e-90]} {RNA1509_10147} {RNA1310_8405.1, RNA1509_10147} {RNA1509_10147, RNA815_4713} |
| 4. | MligTC455_52845 | 257 | 5.35 | Mlig455_026037 | Neo: Int S/G2/M Age: - |
PHF12 | 0.968 | - | - | - | - | - | 0.968 | Mlig455_026037 {REF} {Length: 2833} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=51.8]} {Human: ENSG00000109118, PHF12, PHD finger protein 12, [Score=92.4, Expect=6e-19]} {Mouse: ENSMUSG00000037791, Phf12, PHD finger protein 12, [Score=91.7, Expect=6e-19]} {Dmel: FBgn0029861, CG3815, [Score=103, Expect=7e-23]} {Celegans: WBGene00008081, athp-1, AT Hook plus PHD finger transcription factor, [Score=70.1, Expect=3e-12]} {Smed: dd_Smed_v6_11130_0_1, dd_Smed_v6_11130_0_1, [Score=137, Expect=3e-34]} {RNA1509_39252} {RNA1310_6431} {RNA815_9255} |
| 5. | MligTC455_27596 | 74 | 1.54 | Mlig455_032429 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.399 Region-enriched R4: 9.343/0.00748 |
ERGIC2 | 0.961 | - | - | - | 0.961 | - | - | Mlig455_032429 {REF} {Length: 2175} {TRANSSPLICED} {Pfam: Endoplasmic reticulum vesicle transporter [PF07970.14, score=147.6]; Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) [PF13850.8, score=72.7]} {Human: ENSG00000087502, ERGIC2, ERGIC and golgi 2, [RH, Score=215, Expect=3e-66]} {Mouse: ENSMUSG00000030304, Ergic2, ERGIC and golgi 2, [RH, Score=212, Expect=3e-65]} {Dmel: FBgn0024983, CG4293, [RH, Score=144, Expect=4e-39]} {Celegans: WBGene00010725, erv-46, Yeast ERV (ER to Golgi transport Vesicle protein) homolog, [Score=122, Expect=2e-31]} {Smed: dd_Smed_v6_7595_0_1, dd_Smed_v6_7595_0_1, [RH, Score=241, Expect=1e-76]} {RNA1509_31333, RNA1509_36356, RNA1509_55115} {RNA1310_21337.1, RNA1509_31333, RNA1509_36356} {RNA1509_31333, RNA1509_36356, RNA815_3780.1} |
| 6. | MligTC455_39530 | 199 | 4.16 | Mlig455_049215 | Neo: Irradiation Age: - |
POLA2 | 0.961 | - | - | - | 0.961 | - | - | Mlig455_049215 {REF} {Length: 2336} {TRANSSPLICED} {Pfam: DNA polymerase alpha/epsilon subunit B [PF04042.18, score=33.7]} {Human: ENSG00000014138, POLA2, DNA polymerase alpha 2, accessory subunit, [RH, Score=91.7, Expect=6e-19]} {Mouse: ENSMUSG00000024833, Pola2, polymerase (DNA directed), alpha 2, [RH, Score=97.1, Expect=9e-21]} {Dmel: FBgn0005696, DNApol-alpha73, DNA polymerase alpha 73kD, [RH, Score=77.0, Expect=1e-14]} {Celegans: WBGene00001002, div-1, DNA polymerase alpha subunit B, [RH, Score=72.0, Expect=5e-13]} {RNA1509_57677} {RNA1310_19582, RNA1509_57677} {RNA1509_57677, RNA815_35374} |
| 7. | MligTC455_39529 | 321 | 6.7 | Mlig455_049164 | Neo: Int S/G2/M Age: Up-Up-Down |
0.959 | - | - | - | 0.959 | - | - | Mlig455_049164 {REF} {Length: 599} {RNA1509_56447} {RNA1310_77158, RNA1509_56447} {RNA1509_56447, RNA815_48470} | |
| 8. | MligTC455_44967 | 402 | 8.38 | Mlig455_050720 | Neo: Int S/G2/M Age: - |
NUP133 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_050720 {REF} {Length: 7508} {TRANSSPLICED} {Pfam: Non-repetitive/WGA-negative nucleoporin C-terminal [PF03177.16, score=65.8]} {Human: ENSG00000069248, NUP133, nucleoporin 133, [RH, Score=152, Expect=4e-36]} {Mouse: ENSMUSG00000039509, Nup133, nucleoporin 133, [RH, Score=163, Expect=1e-39]} {Dmel: FBgn0039004, Nup133, Nucleoporin 133kD, [RH, Score=102, Expect=3e-21]} {Smed: dd_Smed_v6_5977_0_1, dd_Smed_v6_5977_0_1, [RH, Score=55.1, Expect=5e-07]} {RNA1509_31103, RNA1509_9832} {RNA1310_2306.1, RNA1509_31103, RNA1509_9832} {RNA1509_31103, RNA1509_9832, RNA815_1062} |
| 9. | MligTC455_52846 | 289 | 6.03 | Mlig455_043189 | Neo: - Age: Down-Up-Down Regeneration-upregulated BL: 2.322 Regeneration-enriched BL: 2.322 |
PHF12 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_043189 {REF} {Length: 2501} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=58.8]} {Human: ENSG00000109118, PHF12, PHD finger protein 12, [Score=94.0, Expect=2e-19]} {Mouse: ENSMUSG00000037791, Phf12, PHD finger protein 12, [Score=94.7, Expect=8e-20]} {Dmel: FBgn0029861, CG3815, [RH, Score=106, Expect=1e-23]} {Celegans: WBGene00008081, athp-1, AT Hook plus PHD finger transcription factor, [RH, Score=79.0, Expect=5e-15]} {Smed: dd_Smed_v6_11130_0_1, dd_Smed_v6_11130_0_1, [RH, Score=148, Expect=2e-37]} {RNA1509_54500} {RNA1310_6431} {RNA815_5155} |
| 10. | MligTC455_07314 | 687 | 14.32 | Mlig455_000525 | Neo: Irradiation Age: - Region-enriched R5: 1.319/0.00385 |
SIN3B | 0.95 | - | - | - | - | - | 0.950 | Mlig455_000525 {REF} {Length: 4206} {TRANSSPLICED} {Pfam: C-terminal domain of Sin3a protein [PF16879.7, score=97.0]} {Human: ENSG00000127511, SIN3B, SIN3 transcription regulator family member B, [Score=186, Expect=1e-48]} {Mouse: ENSMUSG00000031622, Sin3b, transcriptional regulator, SIN3B (yeast), [Score=196, Expect=3e-52]} {Dmel: FBgn0022764, Sin3A, [Score=147, Expect=2e-36]} {Smed: dd_Smed_v6_7034_0_1, dd_Smed_v6_7034_0_1, [Score=97.4, Expect=9e-21]} {RNA1509_4899} {RNA1310_4266.2} {RNA815_1997} |
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