TomoSeq data search

Data search

Results for MligTC455_22202

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_22202

8064

168.00

Mlig455_002382, Mlig455_044552

Neo: -

Age: -

Regeneration-downregulated BL: -1.514

Regeneration-depleted BL: -1.514

TAGLN3

Mlig455_002382 {REF} {Length: 3420} {Pfam: Calponin homology (CH) domain [PF00307.33, score=67.9]; Calponin family repeat [PF00402.20, score=49.9]} {Human: ENSG00000144834, TAGLN3, transgelin 3, [RH, Score=148, Expect=1e-44]} {Mouse: ENSMUSG00000022658, Tagln3, transgelin 3, [RH, Score=147, Expect=7e-45]} {Dmel: FBgn0002789, Mp20, Muscle protein 20, [Score=185, Expect=6e-60]} {Celegans: WBGene00000777, cpn-1, CPN-1; CalPoNin, [Score=129, Expect=1e-37]} {Smed: dd_Smed_v6_1512_0_1, dd_Smed_v6_1512_0_1, [Score=256, Expect=6e-88]} {RNA1509_24477, RNA1509_26578, RNA1509_36683, RNA1509_51022, RNA1509_7417} {RNA1310_27238, RNA1509_24477, RNA1509_26578, RNA1509_36683, RNA1509_51022} {RNA1509_24477, RNA1509_26578, RNA1509_36683, RNA1509_51022, RNA815_11370}

Mlig455_044552 {REF} {Length: 3421} {Pfam: Calponin homology (CH) domain [PF00307.33, score=67.9]; Calponin family repeat [PF00402.20, score=49.9]} {Human: ENSG00000144834, TAGLN3, transgelin 3, [RH, Score=148, Expect=1e-44]} {Mouse: ENSMUSG00000022658, Tagln3, transgelin 3, [RH, Score=147, Expect=7e-45]} {Dmel: FBgn0002789, Mp20, Muscle protein 20, [Score=185, Expect=6e-60]} {Celegans: WBGene00000777, cpn-1, CPN-1; CalPoNin, [Score=129, Expect=1e-37]} {Smed: dd_Smed_v6_1512_0_1, dd_Smed_v6_1512_0_1, [Score=256, Expect=6e-88]} {RNA1509_7417} {RNA1310_27238, RNA1509_7417} {RNA1509_7417, RNA815_11370}

Cumulative graph for MligTC455_22202

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.272	7.504	0.02541	0.42320
RegionR2	-0.189	7.504	0.63517	0.97471
RegionR3	-0.741	7.504	0.03886	0.34305
RegionR4	-0.164	7.504	0.66227	0.96145
RegionR5	0.986	7.504	0.00132	0.01273
RegionR6	0.399	7.504	0.22465	0.80654
RegionR7	0.789	7.504	0.01310	0.20313
RegionR8	0.193	7.504	0.59271	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.568	7.504	0.39927	1.00000
RegenerationR2	-0.481	7.504	0.26049	0.70718
RegenerationR3	0.272	7.504	0.53529	0.87457
RegenerationR4	-0.033	7.504	0.94057	1.00000
RegenerationR5	-0.585	7.504	0.17079	0.59894
RegenerationR6	-0.624	7.504	0.15018	0.47491
RegenerationBL	-1.514	7.504	0.00025	0.00873	Specific for BL: -1.514
RegenerationTP	1.02	7.504	0.00950	0.16528

Genes with expression patterns similar to MligTC455_22202

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_22202	8064	168	Mlig455_002382, Mlig455_044552	Neo: - Age: - Regeneration-downregulated BL: -1.514 Regeneration-depleted BL: -1.514	TAGLN3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_002382 {REF} {Length: 3420} {Pfam: Calponin homology (CH) domain [PF00307.33, score=67.9]; Calponin family repeat [PF00402.20, score=49.9]} {Human: ENSG00000144834, TAGLN3, transgelin 3, [RH, Score=148, Expect=1e-44]} {Mouse: ENSMUSG00000022658, Tagln3, transgelin 3, [RH, Score=147, Expect=7e-45]} {Dmel: FBgn0002789, Mp20, Muscle protein 20, [Score=185, Expect=6e-60]} {Celegans: WBGene00000777, cpn-1, CPN-1; CalPoNin, [Score=129, Expect=1e-37]} {Smed: dd_Smed_v6_1512_0_1, dd_Smed_v6_1512_0_1, [Score=256, Expect=6e-88]} {RNA1509_24477, RNA1509_26578, RNA1509_36683, RNA1509_51022, RNA1509_7417} {RNA1310_27238, RNA1509_24477, RNA1509_26578, RNA1509_36683, RNA1509_51022} {RNA1509_24477, RNA1509_26578, RNA1509_36683, RNA1509_51022, RNA815_11370} Mlig455_044552 {REF} {Length: 3421} {Pfam: Calponin homology (CH) domain [PF00307.33, score=67.9]; Calponin family repeat [PF00402.20, score=49.9]} {Human: ENSG00000144834, TAGLN3, transgelin 3, [RH, Score=148, Expect=1e-44]} {Mouse: ENSMUSG00000022658, Tagln3, transgelin 3, [RH, Score=147, Expect=7e-45]} {Dmel: FBgn0002789, Mp20, Muscle protein 20, [Score=185, Expect=6e-60]} {Celegans: WBGene00000777, cpn-1, CPN-1; CalPoNin, [Score=129, Expect=1e-37]} {Smed: dd_Smed_v6_1512_0_1, dd_Smed_v6_1512_0_1, [Score=256, Expect=6e-88]} {RNA1509_7417} {RNA1310_27238, RNA1509_7417} {RNA1509_7417, RNA815_11370}
2.	MligTC455_40519	1091	22.74	Mlig455_051816	Neo: - Age: Up-Down-Up		2.543	-	-	0.764	0.958	-	0.821	Mlig455_051816 {REF} {Length: 1540} {RNA1509_11880} {RNA1310_18623} {RNA815_8546}
3.	MligTC455_24805	4322	90.04	Mlig455_065919	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.454 Region-enriched R7: 1.214/0.00538 Regeneration-downregulated BL: -1.666 Regeneration-depleted BL: -1.666		1.839	-	-	-	0.875	0.964	-	Mlig455_065919 {REF} {Length: 723} {Pfam: Thymosin beta-4 family [PF01290.22, score=72.0]} {Dmel: FBgn0026084, cib, ciboulot, [Score=49.3, Expect=5e-08]} {Celegans: WBGene00006649, tth-1, Thymosin beta, [Score=46.6, Expect=5e-07]} {Smed: dd_Smed_v6_12_0_1, dd_Smed_v6_12_0_1, [RH, Score=72.0, Expect=1e-17]} {RNA1509_1534} {RNA1310_57754.2} {RNA815_27242}
4.	MligTC455_18421	221	4.61	Mlig455_051563	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.356	GGPS1	1.671	-	-	-	0.957	-	0.714	Mlig455_051563 {REF} {Length: 1568} {TRANSSPLICED} {Pfam: Polyprenyl synthetase [PF00348.19, score=214.9]} {Human: ENSG00000152904, GGPS1, geranylgeranyl diphosphate synthase 1, [RH, Score=312, Expect=5e-106]} {Mouse: ENSMUSG00000021302, Ggps1, geranylgeranyl diphosphate synthase 1, [RH, Score=316, Expect=9e-108]} {Dmel: FBgn0019662, qm, quemao, [RH, Score=276, Expect=1e-91]} {Celegans: WBGene00000761, coq-1, COenzyme Q (Ubiquinone) biosynthesis, [Score=61.6, Expect=1e-10]} {Smed: dd_Smed_v6_7235_0_2, dd_Smed_v6_7235_0_2, [RH, Score=300, Expect=2e-101]} {RNA1509_28048, RNA1509_33893} {RNA1310_30605, RNA1509_33893} {RNA1509_33893, RNA815_14345}
5.	MligTC455_40918	807	16.81	Mlig455_064445	Neo: - Age: -		1.663	-	-	0.705	-	-	0.958	Mlig455_064445 {REF} {Length: 3565} {TRANSSPLICED} {Pfam: BTB/POZ domain [PF00651.33, score=62.0]} {Dmel: FBgn0030961, CG7058, [RH, Score=81.6, Expect=2e-15]} {Smed: dd_Smed_v6_1751_0_1, dd_Smed_v6_1751_0_1, [Score=51.2, Expect=2e-06]} {RNA1509_15372, RNA1509_40543} {RNA1310_21275, RNA1509_40543} {RNA1509_40543, RNA815_19021}
6.	MligTC455_16019	115	2.4	Mlig455_052330	Neo: - Age: -		0.981	-	-	-	0.981	-	-	Mlig455_052330 {REF} {Length: 1758} {RNA1509_43934} {RNA1310_14928} {RNA815_9981}
7.	MligTC455_10362	37	0.77	Mlig455_046555	Neo: - Age: -		0.973	-	-	-	0.973	-	-	Mlig455_046555 {REF} {Length: 3814} {NoTransDecoderORF} {RNA1509_25000} {RNA1310_108245} {RNA815_2326}
8.	MligTC455_45928	476	9.92	Mlig455_014166	Neo: - Age: Down-Up-Down		0.971	-	-	-	0.971	-	-	Mlig455_014166 {REF} {Length: 1495} {Pfam: Sleepless protein [PF17064.7, score=38.3]; Activin types I and II receptor domain [PF01064.25, score=21.6]} {Dmel: FBgn0032021, CG7781, [Score=52.4, Expect=4e-09]} {Smed: dd_Smed_v6_3898_0_1, dd_Smed_v6_3898_0_1, [Score=57.8, Expect=2e-11]} {RNA1509_54625} {RNA1310_14520.1, RNA1509_54625} {RNA1509_54625, RNA815_1344.1}
9.	MligTC455_35702	478	9.95	Mlig455_026056	Neo: - Age: -	ECHDC3	0.97	-	-	-	0.970	-	-	Mlig455_026056 {REF} {Length: 2669} {TRANSSPLICED} {Pfam: Enoyl-CoA hydratase/isomerase [PF00378.22, score=176.1]; Enoyl-CoA hydratase/isomerase [PF16113.7, score=107.6]} {Human: ENSG00000134463, ECHDC3, enoyl-CoA hydratase domain containing 3, [RH, Score=262, Expect=7e-86]} {Mouse: ENSMUSG00000039063, Echdc3, enoyl Coenzyme A hydratase domain containing 3, [RH, Score=253, Expect=2e-82]} {Dmel: FBgn0034191, CG6984, [RH, Score=209, Expect=1e-65]} {Celegans: WBGene00001151, ech-2, Enoyl-CoA Hydratase, [RH, Score=204, Expect=5e-64]} {Smed: dd_Smed_v6_4330_0_1, dd_Smed_v6_4330_0_1, [RH, Score=236, Expect=9e-77]} {RNA1509_28384} {RNA1310_28620} {RNA815_15187}
10.	MligTC455_49947	15947	332.23	Mlig455_032811	Neo: - Age: Down-Down-Up Region-enriched R7: 1.955/0.00000		0.962	-	-	-	0.962	-	-	Mlig455_032811 {REF} {Length: 1080} {RNA1509_1805, RNA1509_19404} {RNA1310_46290.1, RNA1509_1805, RNA1509_19404} {RNA1509_1805, RNA1509_19404, RNA815_17046}
11.	MligTC455_47639	256	5.34	Mlig455_046133	Neo: - Age: -	USF2	0.961	-	-	-	0.961	-	-	Mlig455_046133 {REF} {Length: 1681} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=50.4]} {Human: ENSG00000105698, USF2, upstream transcription factor 2, c-fos interacting, [Score=59.3, Expect=1e-09]} {Mouse: ENSMUSG00000058239, Usf2, upstream transcription factor 2, [Score=57.8, Expect=6e-09]} {Dmel: FBgn0029711, Usf, [Score=54.7, Expect=5e-08]} {Smed: dd_Smed_v6_4871_0_1, dd_Smed_v6_4871_0_1, [RH, Score=55.5, Expect=2e-08]} {RNA1509_24437} {RNA1310_26406} {RNA815_7684}
12.	MligTC455_08196	64	1.33	Mlig455_025661	Neo: - Age: -		0.959	-	-	-	0.959	-	-	Mlig455_025661 {REF} {Length: 2327} {TRANSSPLICED} {Pfam: SAM dependent carboxyl methyltransferase [PF03492.17, score=122.2]} {RNA1509_57863} {RNA1310_33171.1} {RNA815_29973}
13.	MligTC455_27253	1088	22.67	Mlig455_020126	Neo: - Age: Down-Down-Up		0.956	-	-	-	0.956	-	-	Mlig455_020126 {REF} {Length: 1343} {RNA1509_17721} {RNA1310_36348, RNA1509_17721} {RNA1509_17721, RNA815_19211}
14.	MligTC455_43755	1306	27.21	Mlig455_010280	Neo: - Age: - Region-enriched R7: 1.117/0.04060 Regeneration-downregulated BL: -2.741 Regeneration-depleted BL: -2.741	SMTN	0.956	-	-	-	0.956	-	-	Mlig455_010280 {REF} {Length: 2087} {Pfam: Calponin homology (CH) domain [PF00307.33, score=83.4]; Smoothelin cytoskeleton protein [PF12510.10, score=35.2]; CAMSAP CH domain [PF11971.10, score=32.4]} {Human: ENSG00000183963, SMTN, smoothelin, [RH, Score=168, Expect=2e-45]} {Mouse: ENSMUSG00000020439, Smtn, smoothelin, [RH, Score=162, Expect=2e-43]} {Dmel: FBgn0085446, CG34417, [RH, Score=160, Expect=7e-43]} {Celegans: WBGene00020530, T15B12.1, [RH, Score=144, Expect=4e-39]} {Smed: dd_Smed_v6_2554_0_1, dd_Smed_v6_2554_0_1, [RH, Score=176, Expect=2e-54]} {RNA1509_21748} {RNA1310_16112} {RNA815_14550}
15.	MligTC455_16298	946	19.71	Mlig455_004008, Mlig455_004092	Neo: - Age: -		0.955	-	-	-	0.955	-	-	Mlig455_004008 {REF} {Length: 3369} {Pfam: Mab-21 protein [PF03281.16, score=69.3]} {RNA1509_6443} {RNA1310_5005} {RNA815_2046} Mlig455_004092 {REF} {Length: 3326} {Pfam: Mab-21 protein [PF03281.16, score=67.1]} {RNA1509_6443} {RNA1310_5005} {RNA815_2046}
16.	MligTC455_13847	144	3	Mlig455_005556	Neo: - Age: logFC(26M/2M)=-0.534 Region-enriched R2: 3.307/0.04973	TEKT3	0.951	-	-	-	0.951	-	-	Mlig455_005556 {REF} {Length: 3025} {Pfam: Tektin family [PF03148.16, score=370.9]} {Human: ENSG00000125409, TEKT3, tektin 3, [Score=286, Expect=7e-91]} {Mouse: ENSMUSG00000042189, Tekt3, tektin 3, [Score=269, Expect=2e-84]} {Dmel: FBgn0052819, CG32819, [Score=201, Expect=2e-58]} {Smed: dd_Smed_v6_6511_0_1, dd_Smed_v6_6511_0_1, [Score=329, Expect=4e-108]} {RNA1509_15766} {RNA1310_13406} {RNA815_7559}
17.	MligTC455_16421	147	3.07	Mlig455_022618	Neo: - Age: Up-Down-Up		0.951	-	-	-	0.951	-	-	Mlig455_022618 {REF} {Length: 2008} {TRANSSPLICED} {RNA1509_46632} {RNA1310_30684} {RNA815_13952}
18.	MligTC455_31760	453	9.44	Mlig455_048312, Mlig455_048355	Neo: Irradiation Age: - Region-enriched R5: 1.879/0.00328	TMEM209	0.951	-	-	-	-	0.951	-	Mlig455_048312 {REF} {Length: 3580} {Pfam: Cytochrome B561, N terminal [PF09786.11, score=93.4]} {Human: ENSG00000146842, TMEM209, transmembrane protein 209, [RH, Score=105, Expect=4e-23]} {Mouse: ENSMUSG00000029782, Tmem209, transmembrane protein 209, [RH, Score=104, Expect=1e-23]} {Dmel: FBgn0036710, CG6479, [RH, Score=82.0, Expect=6e-16]} {Celegans: WBGene00007186, B0464.6, [RH, Score=74.7, Expect=9e-14]} {RNA1509_13752} {RNA1310_3609.1, RNA1509_13752} {RNA1509_13752, RNA815_2171} Mlig455_048355 {REF} {Length: 2791} {TRANSSPLICED} {Pfam: Cytochrome B561, N terminal [PF09786.11, score=92.6]} {Human: ENSG00000146842, TMEM209, transmembrane protein 209, [RH, Score=105, Expect=4e-23]} {Mouse: ENSMUSG00000029782, Tmem209, transmembrane protein 209, [RH, Score=105, Expect=1e-23]} {Dmel: FBgn0036710, CG6479, [RH, Score=81.6, Expect=6e-16]} {Celegans: WBGene00007186, B0464.6, [RH, Score=75.1, Expect=9e-14]} {RNA1509_13752} {RNA1310_3609.2} {RNA815_2171}

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