TomoSeq data search

Data search

Results for MligTC455_41133

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41133

957

19.93

Mlig455_044677

Neo: -

Age: logFC(26M/2M)=-0.323

CALM2

Mlig455_044677 {REF} {Length: 4522} {Pfam: EF hand [PF00036.34, score=104.0]; EF-hand domain pair [PF13499.8, score=96.3]; EF-hand domain [PF13405.8, score=83.9]; EF-hand domain pair [PF13833.8, score=82.5]; EF hand [PF13202.8, score=72.1]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=33.0]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=28.1]; EF-hand domain [PF14658.8, score=25.0]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=108, Expect=6e-30]; ENSG00000160014, CALM3, calmodulin 3, [Score=108, Expect=6e-30]; ENSG00000198668, CALM1, calmodulin 1, [Score=108, Expect=5e-30]; ENSG00000178363, CALML3, calmodulin like 3, [Score=107, Expect=1e-29]; ENSG00000178372, CALML5, calmodulin like 5, [Score=106, Expect=2e-29]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=108, Expect=4e-30]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=108, Expect=4e-30]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=108, Expect=4e-30]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=103, Expect=2e-28]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=105, Expect=3e-29]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=105, Expect=2e-29]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=105, Expect=1e-29]} {RNA1509_28759, RNA1509_37134, RNA1509_8150} {RNA1310_41912, RNA1509_37134, RNA1509_8150} {RNA1509_37134, RNA1509_8150, RNA815_21903.1}

Cumulative graph for MligTC455_41133

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.698	4.616	0.03101	0.44893
RegionR2	0.306	4.616	0.62383	0.96657
RegionR3	0.684	4.616	0.18273	0.71534
RegionR4	0.027	4.616	0.96205	1.00000
RegionR5	0.137	4.616	0.78332	1.00000
RegionR6	0.355	4.616	0.50187	1.00000
RegionR7	0.651	4.616	0.21209	0.82753
RegionR8	0.537	4.616	0.36015	0.99471

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.861	4.616	0.24384	0.96633
RegenerationR2	-0.355	4.616	0.58002	0.90705
RegenerationR3	-0.334	4.616	0.60801	0.91180
RegenerationR4	-0.2	4.616	0.76896	0.97652
RegenerationR5	-0.773	4.616	0.24348	0.67668
RegenerationR6	-0.486	4.616	0.45910	0.77688
RegenerationBL	-0.974	4.616	0.12616	0.42208
RegenerationTP	-1.643	4.616	0.02014	0.24335

Genes with expression patterns similar to MligTC455_41133

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41133	957	19.93	Mlig455_044677	Neo: - Age: logFC(26M/2M)=-0.323	CALM2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_044677 {REF} {Length: 4522} {Pfam: EF hand [PF00036.34, score=104.0]; EF-hand domain pair [PF13499.8, score=96.3]; EF-hand domain [PF13405.8, score=83.9]; EF-hand domain pair [PF13833.8, score=82.5]; EF hand [PF13202.8, score=72.1]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=33.0]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=28.1]; EF-hand domain [PF14658.8, score=25.0]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=108, Expect=6e-30]; ENSG00000160014, CALM3, calmodulin 3, [Score=108, Expect=6e-30]; ENSG00000198668, CALM1, calmodulin 1, [Score=108, Expect=5e-30]; ENSG00000178363, CALML3, calmodulin like 3, [Score=107, Expect=1e-29]; ENSG00000178372, CALML5, calmodulin like 5, [Score=106, Expect=2e-29]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=108, Expect=4e-30]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=108, Expect=4e-30]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=108, Expect=4e-30]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=103, Expect=2e-28]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=105, Expect=3e-29]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=105, Expect=2e-29]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=105, Expect=1e-29]} {RNA1509_28759, RNA1509_37134, RNA1509_8150} {RNA1310_41912, RNA1509_37134, RNA1509_8150} {RNA1509_37134, RNA1509_8150, RNA815_21903.1}
2.	MligTC455_43980	756	15.74	Mlig455_010403	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.562	CALM3	1.902	-	0.940	-	-	0.962	-	Mlig455_010403 {REF} {Length: 1382} {Pfam: EF-hand domain pair [PF13499.8, score=113.0]; EF hand [PF00036.34, score=99.8]; EF-hand domain pair [PF13833.8, score=95.7]; EF-hand domain [PF13405.8, score=85.4]; EF hand [PF13202.8, score=61.7]; EF-hand domain [PF14658.8, score=49.0]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=28.1]} {Human: ENSG00000160014, CALM3, calmodulin 3, [Score=154, Expect=4e-48]; ENSG00000198668, CALM1, calmodulin 1, [Score=154, Expect=4e-48]; ENSG00000143933, CALM2, calmodulin 2, [Score=154, Expect=4e-48]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=154, Expect=2e-48]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=154, Expect=2e-48]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=154, Expect=2e-48]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=153, Expect=2e-48]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=152, Expect=4e-48]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=152, Expect=3e-48]} {RNA1509_32040} {RNA1310_21110, RNA1509_32040} {RNA1509_32040, RNA815_14492.1}
3.	MligTC455_43049	1806	37.62	Mlig455_062571	Neo: - Age: -	ACAN	1.767	-	0.816	-	-	0.951	-	Mlig455_062571 {REF} {Length: 5543} {TRANSSPLICED} {Human: ENSG00000157766, ACAN, aggrecan, [RH, Score=120, Expect=2e-26]} {Mouse: ENSMUSG00000030607, Acan, aggrecan, [Score=58.2, Expect=9e-08]} {Celegans: WBGene00013762, Y113G7B.12, [Score=57.0, Expect=1e-07]} {RNA1509_5653} {RNA1310_12100} {RNA815_6156.1}
4.	MligTC455_26282	437	9.11	Mlig455_022891	Neo: - Age: -	CYP2E1	1.766	-	-	-	0.802	0.964	-	Mlig455_022891 {REF} {Length: 2781} {Pfam: Cytochrome P450 [PF00067.24, score=319.0]} {Human: ENSG00000130649, CYP2E1, cytochrome P450 family 2 subfamily E member 1, [Score=237, Expect=1e-71]; ENSG00000138115, CYP2C8, cytochrome P450 family 2 subfamily C member 8, [Score=234, Expect=1e-70]; ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=226, Expect=2e-67]} {Mouse: ENSMUSG00000066704, Cyp2b19, cytochrome P450, family 2, subfamily b, polypeptide 19, [Score=243, Expect=8e-74]; ENSMUSG00000049685, Cyp2g1, cytochrome P450, family 2, subfamily g, polypeptide 1, [Score=243, Expect=8e-74]; ENSMUSG00000052520, Cyp2j5, cytochrome P450, family 2, subfamily j, polypeptide 5, [Score=243, Expect=9e-74]; ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=241, Expect=5e-73]; ENSMUSG00000040650, Cyp2b23, cytochrome P450, family 2, subfamily b, polypeptide 23, [Score=233, Expect=3e-70]; ENSMUSG00000028571, Cyp2j13, cytochrome P450, family 2, subfamily j, polypeptide 13, [Score=233, Expect=7e-70]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=213, Expect=2e-62]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=217, Expect=2e-64]} {Smed: dd_Smed_v6_3919_0_1, dd_Smed_v6_3919_0_1, [RH, Score=282, Expect=5e-89]} {RNA1509_11252, RNA1509_24961, RNA1509_32151, RNA1509_53462} {RNA1310_13284, RNA1509_11252, RNA1509_24961, RNA1509_32151, RNA1509_53462} {RNA1509_11252, RNA1509_24961, RNA1509_32151, RNA1509_53462, RNA815_723}
5.	MligTC455_31982	348	7.25	Mlig455_020999	Neo: - Age: -	DIS3L2	0.961	-	-	-	-	-	0.961	Mlig455_020999 {REF} {Length: 2751} {TRANSSPLICED} {Pfam: RNB domain [PF00773.21, score=279.9]; DIS3-like exonuclease 2 C terminal [PF17877.3, score=36.6]; Rrp44-like cold shock domain [PF17216.5, score=27.4]; Dis3-like cold-shock domain 2 (CSD2) [PF17849.3, score=23.3]} {Human: ENSG00000144535, DIS3L2, DIS3 like 3'-5' exoribonuclease 2, [Score=358, Expect=3e-110]} {Mouse: ENSMUSG00000053333, Dis3l2, DIS3 like 3'-5' exoribonuclease 2, [Score=366, Expect=1e-113]} {Dmel: FBgn0035111, Dis3l2, Dis3 like 3'-5' exoribonuclease 2, [Score=254, Expect=2e-71]} {Celegans: WBGene00018612, disl-2, DIS3-like exonuclease 2, [Score=325, Expect=8e-99]} {Smed: dd_Smed_v6_7044_0_1, dd_Smed_v6_7044_0_1, [Score=344, Expect=5e-106]} {RNA1509_57497} {RNA1310_4374.3} {RNA815_1234.1}
6.	MligTC455_50280	992	20.66	Mlig455_026022	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.315	SYNGR2	0.953	-	-	-	-	0.953	-	Mlig455_026022 {REF} {Length: 1457} {Pfam: Membrane-associating domain [PF01284.25, score=58.8]} {Human: ENSG00000108639, SYNGR2, synaptogyrin 2, [RH, Score=133, Expect=4e-38]} {Mouse: ENSMUSG00000048277, Syngr2, synaptogyrin 2, [RH, Score=135, Expect=5e-39]} {Dmel: FBgn0033876, Syngr, Synaptogyrin, [Score=134, Expect=2e-38]} {Celegans: WBGene00004912, sng-1, Synaptogyrin homolog 1, [Score=78.2, Expect=2e-17]} {Smed: dd_Smed_v6_6478_0_1, dd_Smed_v6_6478_0_1, [Score=174, Expect=4e-54]} {RNA1509_17036} {RNA1310_20206.1, RNA1509_17036} {RNA1509_17036, RNA815_11114}
7.	MligTC455_44679	1192	24.82	Mlig455_015484	Neo: - Age: -	CATIP	0.952	-	-	-	-	0.952	-	Mlig455_015484 {REF} {Length: 1772} {Human: ENSG00000158428, CATIP, ciliogenesis associated TTC17 interacting protein, [RH, Score=235, Expect=2e-73]} {Mouse: ENSMUSG00000073650, Catip, ciliogenesis associated TTC17 interacting protein, [RH, Score=199, Expect=1e-58]} {Smed: dd_Smed_v6_5952_0_4, dd_Smed_v6_5952_0_4, [RH, Score=307, Expect=6e-102]} {RNA1509_4430} {RNA1310_17964} {RNA815_14802}
8.	MligTC455_31981	341	7.11	Mlig455_020923	Neo: - Age: -	DIS3L2	0.95	-	-	-	-	-	0.950	Mlig455_020923 {REF} {Length: 724} {Pfam: DIS3-like exonuclease 2 C terminal [PF17877.3, score=42.2]} {Human: ENSG00000144535, DIS3L2, DIS3 like 3'-5' exoribonuclease 2, [Score=50.8, Expect=7e-08]} {Mouse: ENSMUSG00000053333, Dis3l2, DIS3 like 3'-5' exoribonuclease 2, [Score=53.1, Expect=2e-08]} {Celegans: WBGene00018612, disl-2, DIS3-like exonuclease 2, [Score=49.7, Expect=2e-07]} {Smed: dd_Smed_v6_7044_0_1, dd_Smed_v6_7044_0_1, [Score=68.9, Expect=3e-14]} {RNA1509_57497} {RNA1310_4374.3} {RNA815_1234.1}

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