TomoSeq data search

Data search

Results for MligTC455_50280

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_50280

992

20.66

Mlig455_026022

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.315

SYNGR2

Mlig455_026022 {REF} {Length: 1457} {Pfam: Membrane-associating domain [PF01284.25, score=58.8]} {Human: ENSG00000108639, SYNGR2, synaptogyrin 2, [RH, Score=133, Expect=4e-38]} {Mouse: ENSMUSG00000048277, Syngr2, synaptogyrin 2, [RH, Score=135, Expect=5e-39]} {Dmel: FBgn0033876, Syngr, Synaptogyrin, [Score=134, Expect=2e-38]} {Celegans: WBGene00004912, sng-1, Synaptogyrin homolog 1, [Score=78.2, Expect=2e-17]} {Smed: dd_Smed_v6_6478_0_1, dd_Smed_v6_6478_0_1, [Score=174, Expect=4e-54]} {RNA1509_17036} {RNA1310_20206.1, RNA1509_17036} {RNA1509_17036, RNA815_11114}

Cumulative graph for MligTC455_50280

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.066	4.533	0.08337	0.62966
RegionR2	0.691	4.533	0.07530	0.33573
RegionR3	0.723	4.533	0.02706	0.28112
RegionR4	0.255	4.533	0.52968	0.85382
RegionR5	-0.07	4.533	0.84458	1.00000
RegionR6	-0.247	4.533	0.53089	1.00000
RegionR7	-0.024	4.533	0.96410	1.00000
RegionR8	0.738	4.533	0.17258	0.74922

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.287	4.533	0.89089	1.00000
RegenerationR2	-0.267	4.533	0.36789	0.79404
RegenerationR3	-0.442	4.533	0.18443	0.62059
RegenerationR4	0.188	4.533	0.59566	0.91149
RegenerationR5	-0.196	4.533	0.56577	0.89432
RegenerationR6	0.193	4.533	0.60293	0.86997
RegenerationBL	0.301	4.533	0.43775	0.80529
RegenerationTP	-0.002	4.533	0.99564	1.00000

Genes with expression patterns similar to MligTC455_50280

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50280	992	20.66	Mlig455_026022	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.315	SYNGR2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_026022 {REF} {Length: 1457} {Pfam: Membrane-associating domain [PF01284.25, score=58.8]} {Human: ENSG00000108639, SYNGR2, synaptogyrin 2, [RH, Score=133, Expect=4e-38]} {Mouse: ENSMUSG00000048277, Syngr2, synaptogyrin 2, [RH, Score=135, Expect=5e-39]} {Dmel: FBgn0033876, Syngr, Synaptogyrin, [Score=134, Expect=2e-38]} {Celegans: WBGene00004912, sng-1, Synaptogyrin homolog 1, [Score=78.2, Expect=2e-17]} {Smed: dd_Smed_v6_6478_0_1, dd_Smed_v6_6478_0_1, [Score=174, Expect=4e-54]} {RNA1509_17036} {RNA1310_20206.1, RNA1509_17036} {RNA1509_17036, RNA815_11114}
2.	MligTC455_49138	3919	81.64	Mlig455_039106, Mlig455_042792	Neo: - Age: logFC(26M/2M)=-0.461		1.863	-	-	-	0.961	-	0.902	Mlig455_039106 {REF} {Length: 1099} {RNA1509_12928, RNA1509_26821, RNA1509_27751} {RNA1310_36371, RNA1509_12928, RNA1509_26821, RNA1509_27751} {RNA1509_12928, RNA1509_26821, RNA1509_27751, RNA815_18367} Mlig455_042792 {REF} {Length: 1094} {RNA1509_26821} {RNA1310_36371} {RNA815_18367}
3.	MligTC455_39968	3050	63.55	Mlig455_038803, Mlig455_038818	Neo: - Age: -	ARMH1	1.773	-	-	-	-	0.953	0.820	Mlig455_038803 {REF} {Length: 1521} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5578) [PF17741.3, score=307.3]; Diaphanous GTPase-binding Domain [PF06371.15, score=24.8]} {Human: ENSG00000198520, ARMH1, armadillo-like helical domain containing 1, [Score=330, Expect=1e-109]} {Mouse: ENSMUSG00000060268, Armh1, armadillo-like helical domain containing 1, [Score=348, Expect=9e-117]} {Smed: dd_Smed_v6_18133_0_1, dd_Smed_v6_18133_0_1, [Score=452, Expect=2e-158]} {RNA1509_47565} {RNA1310_17500.2} {RNA815_7289} Mlig455_038818 {REF} {Length: 1590} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5578) [PF17741.3, score=371.8]; Diaphanous GTPase-binding Domain [PF06371.15, score=24.7]; HEAT repeats [PF13646.8, score=23.6]} {Human: ENSG00000198520, ARMH1, armadillo-like helical domain containing 1, [RH, Score=388, Expect=4e-132]} {Mouse: ENSMUSG00000060268, Armh1, armadillo-like helical domain containing 1, [RH, Score=405, Expect=9e-139]} {Smed: dd_Smed_v6_18133_0_1, dd_Smed_v6_18133_0_1, [RH, Score=512, Expect=0.0]} {RNA1509_47565, RNA1509_5763} {RNA1310_17500.1, RNA1509_47565, RNA1509_5763} {RNA1509_47565, RNA1509_5763, RNA815_7289}
4.	MligTC455_33842	492	10.26	Mlig455_004899	Neo: - Age: - Region-enriched R2: 2.178/0.01972	CDKL1	1.762	-	-	-	0.951	-	0.811	Mlig455_004899 {REF} {Length: 2500} {Pfam: Protein kinase domain [PF00069.27, score=247.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=116.6]; Haspin like kinase domain [PF12330.10, score=18.7]; ABC1 atypical kinase-like domain [PF03109.18, score=18.6]} {Human: ENSG00000100490, CDKL1, cyclin dependent kinase like 1, [RH, Score=429, Expect=3e-150]; ENSG00000205111, CDKL4, cyclin dependent kinase like 4, [RH, Score=422, Expect=2e-148]} {Mouse: ENSMUSG00000020990, Cdkl1, cyclin-dependent kinase-like 1 (CDC2-related kinase), [RH, Score=432, Expect=7e-152]; ENSMUSG00000033966, Cdkl4, cyclin-dependent kinase-like 4, [RH, Score=423, Expect=3e-148]} {Dmel: FBgn0031730, CG7236, [RH, Score=381, Expect=6e-131]} {Celegans: WBGene00012779, cdkl-1, Cyclin-Dependent Kinase-Like, [RH, Score=396, Expect=4e-136]} {Smed: dd_Smed_v6_9353_0_1, dd_Smed_v6_9353_0_1, [RH, Score=481, Expect=5e-171]} {RNA1509_19679} {RNA1310_6686.1} {RNA815_5397}
5.	MligTC455_06092	762	15.88	Mlig455_069915	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.940		1.751	-	-	-	-	0.951	0.800	Mlig455_069915 {REF} {Length: 3038} {Pfam: Otopetrin [PF03189.15, score=32.6]} {RNA1509_10108} {RNA1310_8141, RNA1509_10108} {RNA1509_10108, RNA815_2847.1}
6.	MligTC455_42709	882	18.37	Mlig455_051930	Neo: - Age: Down-Up-Up Region-enriched R4: 1.393/0.00406	PIH1D3	1.731	-	-	-	0.957	0.774	-	Mlig455_051930 {REF} {Length: 821} {TRANSSPLICED} {Pfam: PIH1 CS-like domain [PF18201.3, score=50.0]} {Human: ENSG00000080572, PIH1D3, PIH1 domain containing 3, [RH, Score=111, Expect=4e-30]} {Dmel: FBgn0036437, CG5048, [RH, Score=94.7, Expect=6e-24]} {Smed: dd_Smed_v6_9872_0_1, dd_Smed_v6_9872_0_1, [RH, Score=155, Expect=6e-48]} {RNA1509_20466, RNA1509_43193} {RNA1310_42071.1, RNA1509_20466, RNA1509_43193} {RNA1509_20466, RNA1509_43193, RNA815_21329}
7.	MligTC455_41133	957	19.93	Mlig455_044677	Neo: - Age: logFC(26M/2M)=-0.323	CALM2	0.953	-	-	-	-	0.953	-	Mlig455_044677 {REF} {Length: 4522} {Pfam: EF hand [PF00036.34, score=104.0]; EF-hand domain pair [PF13499.8, score=96.3]; EF-hand domain [PF13405.8, score=83.9]; EF-hand domain pair [PF13833.8, score=82.5]; EF hand [PF13202.8, score=72.1]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=33.0]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=28.1]; EF-hand domain [PF14658.8, score=25.0]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=108, Expect=6e-30]; ENSG00000160014, CALM3, calmodulin 3, [Score=108, Expect=6e-30]; ENSG00000198668, CALM1, calmodulin 1, [Score=108, Expect=5e-30]; ENSG00000178363, CALML3, calmodulin like 3, [Score=107, Expect=1e-29]; ENSG00000178372, CALML5, calmodulin like 5, [Score=106, Expect=2e-29]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=108, Expect=4e-30]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=108, Expect=4e-30]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=108, Expect=4e-30]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=103, Expect=2e-28]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=105, Expect=3e-29]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=105, Expect=2e-29]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=105, Expect=1e-29]} {RNA1509_28759, RNA1509_37134, RNA1509_8150} {RNA1310_41912, RNA1509_37134, RNA1509_8150} {RNA1509_37134, RNA1509_8150, RNA815_21903.1}

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