TomoSeq data search

Data search

Results for MligTC455_43049

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43049

1806

37.62

Mlig455_062571

Neo: -

Age: -

ACAN

Mlig455_062571 {REF} {Length: 5543} {TRANSSPLICED} {Human: ENSG00000157766, ACAN, aggrecan, [RH, Score=120, Expect=2e-26]} {Mouse: ENSMUSG00000030607, Acan, aggrecan, [Score=58.2, Expect=9e-08]} {Celegans: WBGene00013762, Y113G7B.12, [Score=57.0, Expect=1e-07]} {RNA1509_5653} {RNA1310_12100} {RNA815_6156.1}

Cumulative graph for MligTC455_43049

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.904	5.412	0.18564	0.81660
RegionR2	0.302	5.412	0.40305	0.79688
RegionR3	0.282	5.412	0.33786	0.87403
RegionR4	0.475	5.412	0.16943	0.43249
RegionR5	0.228	5.412	0.42461	0.78475
RegionR6	0.194	5.412	0.52584	1.00000
RegionR7	-0.381	5.412	0.28688	0.92096
RegionR8	-0.194	5.412	0.62794	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-2.253	5.412	0.09884	0.81498
RegenerationR2	-0.061	5.412	0.85597	1.00000
RegenerationR3	-0.224	5.412	0.54047	0.87778
RegenerationR4	-0.382	5.412	0.30920	0.74964
RegenerationR5	-0.093	5.412	0.79448	0.98722
RegenerationR6	-0.177	5.412	0.63117	0.88735
RegenerationBL	-0.313	5.412	0.42298	0.79114
RegenerationTP	0.244	5.412	0.54852	0.93204

Genes with expression patterns similar to MligTC455_43049

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43049	1806	37.62	Mlig455_062571	Neo: - Age: -	ACAN	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_062571 {REF} {Length: 5543} {TRANSSPLICED} {Human: ENSG00000157766, ACAN, aggrecan, [RH, Score=120, Expect=2e-26]} {Mouse: ENSMUSG00000030607, Acan, aggrecan, [Score=58.2, Expect=9e-08]} {Celegans: WBGene00013762, Y113G7B.12, [Score=57.0, Expect=1e-07]} {RNA1509_5653} {RNA1310_12100} {RNA815_6156.1}
2.	MligTC455_28299	2270	47.29	Mlig455_059761	Neo: - Age: logFC(26M/2M)=0.708		1.865	-	-	-	0.988	0.877	-	Mlig455_059761 {REF} {Length: 1040} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9050} {RNA1310_21372.2, RNA1509_9050} {RNA1509_9050, RNA815_15381}
3.	MligTC455_28292	1893	39.43	Mlig455_018004	Neo: - Age: Down-Up-Down		1.803	-	-	-	0.985	0.818	-	Mlig455_018004 {REF} {Length: 1040} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9050} {RNA1310_21372.2} {RNA815_15381}
4.	MligTC455_41133	957	19.93	Mlig455_044677	Neo: - Age: logFC(26M/2M)=-0.323	CALM2	1.767	-	0.816	-	-	0.951	-	Mlig455_044677 {REF} {Length: 4522} {Pfam: EF hand [PF00036.34, score=104.0]; EF-hand domain pair [PF13499.8, score=96.3]; EF-hand domain [PF13405.8, score=83.9]; EF-hand domain pair [PF13833.8, score=82.5]; EF hand [PF13202.8, score=72.1]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=33.0]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=28.1]; EF-hand domain [PF14658.8, score=25.0]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=108, Expect=6e-30]; ENSG00000160014, CALM3, calmodulin 3, [Score=108, Expect=6e-30]; ENSG00000198668, CALM1, calmodulin 1, [Score=108, Expect=5e-30]; ENSG00000178363, CALML3, calmodulin like 3, [Score=107, Expect=1e-29]; ENSG00000178372, CALML5, calmodulin like 5, [Score=106, Expect=2e-29]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=108, Expect=4e-30]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=108, Expect=4e-30]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=108, Expect=4e-30]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=103, Expect=2e-28]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=105, Expect=3e-29]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=105, Expect=2e-29]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=105, Expect=1e-29]} {RNA1509_28759, RNA1509_37134, RNA1509_8150} {RNA1310_41912, RNA1509_37134, RNA1509_8150} {RNA1509_37134, RNA1509_8150, RNA815_21903.1}
5.	MligTC455_26314	5157	107.45	Mlig455_030231	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.467	SQSTM1	1.725	-	-	-	0.951	0.774	-	Mlig455_030231 {REF} {Length: 2335} {Pfam: UBA domain [PF16577.7, score=51.0]; Zinc finger, ZZ type [PF00569.19, score=38.4]; PB1 domain [PF00564.26, score=22.7]} {Human: ENSG00000161011, SQSTM1, sequestosome 1, [Score=65.5, Expect=6e-11]; ENSG00000284099, AC008393.2, sequestosome 1, [Score=64.7, Expect=9e-11]} {Mouse: ENSMUSG00000015837, Sqstm1, sequestosome 1, [Score=103, Expect=1e-23]} {Dmel: FBgn0037655, Kcmf1, Potassium channel modulatory factor 1, [Score=49.3, Expect=5e-06]} {Celegans: WBGene00011737, sqst-1, SeQueSTosome related, [Score=55.5, Expect=5e-08]} {RNA1509_10635, RNA1509_4756, RNA1509_5318, RNA1509_911} {RNA1310_32633, RNA1509_10635, RNA1509_4756, RNA1509_5318, RNA1509_911} {RNA1509_10635, RNA1509_4756, RNA1509_5318, RNA1509_911, RNA815_1033}
6.	MligTC455_28298	2452	51.09	Mlig455_027052, Mlig455_033234	Neo: - Age: -		0.988	-	-	-	0.988	-	-	Mlig455_027052 {REF} {Length: 1606} {NoTransDecoderORF} {RNA1509_13847} {RNA1310_10847.1} {RNA815_5428.1} Mlig455_033234 {REF} {Length: 3912} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13847, RNA1509_36354} {RNA1310_14467, RNA1509_36354} {RNA1509_36354, RNA815_5428.1}
7.	MligTC455_26281	697	14.53	Mlig455_022872	Neo: - Age: -	CYP2U1	0.963	-	-	-	-	0.963	-	Mlig455_022872 {REF} {Length: 2676} {Pfam: Cytochrome P450 [PF00067.24, score=219.8]} {Human: ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=167, Expect=2e-49]; ENSG00000197838, CYP2A13, cytochrome P450 family 2 subfamily A member 13, [Score=163, Expect=1e-46]; ENSG00000186104, CYP2R1, cytochrome P450 family 2 subfamily R member 1, [Score=160, Expect=2e-47]; ENSG00000255974, CYP2A6, cytochrome P450 family 2 subfamily A member 6, [Score=159, Expect=3e-45]} {Mouse: ENSMUSG00000066704, Cyp2b19, cytochrome P450, family 2, subfamily b, polypeptide 19, [Score=164, Expect=5e-47]; ENSMUSG00000030483, Cyp2b10, cytochrome P450, family 2, subfamily b, polypeptide 10, [Score=163, Expect=1e-46]; ENSMUSG00000052520, Cyp2j5, cytochrome P450, family 2, subfamily j, polypeptide 5, [Score=163, Expect=1e-46]; ENSMUSG00000040660, Cyp2b9, cytochrome P450, family 2, subfamily b, polypeptide 9, [Score=162, Expect=2e-46]; ENSMUSG00000060407, Cyp2a12, cytochrome P450, family 2, subfamily a, polypeptide 12, [Score=162, Expect=3e-46]; ENSMUSG00000049685, Cyp2g1, cytochrome P450, family 2, subfamily g, polypeptide 1, [Score=162, Expect=3e-46]; ENSMUSG00000040583, Cyp2b13, cytochrome P450, family 2, subfamily b, polypeptide 13, [Score=162, Expect=2e-46]; ENSMUSG00000030670, Cyp2r1, cytochrome P450, family 2, subfamily r, polypeptide 1, [Score=157, Expect=3e-46]; ENSMUSG00000040650, Cyp2b23, cytochrome P450, family 2, subfamily b, polypeptide 23, [Score=156, Expect=3e-44]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=134, Expect=5e-36]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=160, Expect=1e-45]} {Smed: dd_Smed_v6_2351_0_3, dd_Smed_v6_2351_0_3, [Score=201, Expect=2e-61]} {RNA1509_32151} {RNA1310_10092} {RNA815_723}
8.	MligTC455_26282	437	9.11	Mlig455_022891	Neo: - Age: -	CYP2E1	0.962	-	-	-	-	0.962	-	Mlig455_022891 {REF} {Length: 2781} {Pfam: Cytochrome P450 [PF00067.24, score=319.0]} {Human: ENSG00000130649, CYP2E1, cytochrome P450 family 2 subfamily E member 1, [Score=237, Expect=1e-71]; ENSG00000138115, CYP2C8, cytochrome P450 family 2 subfamily C member 8, [Score=234, Expect=1e-70]; ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=226, Expect=2e-67]} {Mouse: ENSMUSG00000066704, Cyp2b19, cytochrome P450, family 2, subfamily b, polypeptide 19, [Score=243, Expect=8e-74]; ENSMUSG00000049685, Cyp2g1, cytochrome P450, family 2, subfamily g, polypeptide 1, [Score=243, Expect=8e-74]; ENSMUSG00000052520, Cyp2j5, cytochrome P450, family 2, subfamily j, polypeptide 5, [Score=243, Expect=9e-74]; ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=241, Expect=5e-73]; ENSMUSG00000040650, Cyp2b23, cytochrome P450, family 2, subfamily b, polypeptide 23, [Score=233, Expect=3e-70]; ENSMUSG00000028571, Cyp2j13, cytochrome P450, family 2, subfamily j, polypeptide 13, [Score=233, Expect=7e-70]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=213, Expect=2e-62]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=217, Expect=2e-64]} {Smed: dd_Smed_v6_3919_0_1, dd_Smed_v6_3919_0_1, [RH, Score=282, Expect=5e-89]} {RNA1509_11252, RNA1509_24961, RNA1509_32151, RNA1509_53462} {RNA1310_13284, RNA1509_11252, RNA1509_24961, RNA1509_32151, RNA1509_53462} {RNA1509_11252, RNA1509_24961, RNA1509_32151, RNA1509_53462, RNA815_723}
9.	MligTC455_51551	726	15.13	Mlig455_016695	Neo: - Age: logFC(26M/2M)=-0.349 Region-enriched R4: 1.106/0.02364		0.961	-	0.961	-	-	-	-	Mlig455_016695 {REF} {Length: 1801} {RNA1509_36530} {RNA1310_20851.1, RNA1509_36530} {RNA1509_36530, RNA815_21142}
10.	MligTC455_08365	2725	56.78	Mlig455_049105	Neo: - Age: -	DYNLRB1	0.954	-	-	-	-	0.954	-	Mlig455_049105 {REF} {Length: 862} {Pfam: Roadblock/LC7 domain [PF03259.19, score=79.3]; Ragulator complex protein LAMTOR5 [PF16672.7, score=22.4]} {Human: ENSG00000125971, DYNLRB1, dynein light chain roadblock-type 1, [RH, Score=137, Expect=2e-43]; ENSG00000168589, DYNLRB2, dynein light chain roadblock-type 2, [RH, Score=132, Expect=3e-41]} {Mouse: ENSMUSG00000047459, Dynlrb1, dynein light chain roadblock-type 1, [RH, Score=134, Expect=3e-42]; ENSMUSG00000034467, Dynlrb2, dynein light chain roadblock-type 2, [RH, Score=134, Expect=4e-42]} {Dmel: FBgn0024196, robl, roadblock, [Score=132, Expect=1e-41]} {Celegans: WBGene00012004, dyrb-1, Dynein light chain roadblock, [RH, Score=98.6, Expect=2e-28]} {Smed: dd_Smed_v6_5440_0_1, dd_Smed_v6_5440_0_1, [RH, Score=133, Expect=4e-42]} {RNA1509_6206} {RNA1310_34984} {RNA815_17288.1}
11.	MligTC455_45578	1731	36.06	Mlig455_036467	Neo: - Age: -	DSP	0.954	-	-	-	-	0.954	-	Mlig455_036467 {REF} {Length: 14862} {Pfam: Putative beta-lactamase-inhibitor-like, PepSY-like [PF11396.10, score=73.5]; SH3 domain [PF17902.3, score=47.0]} {Human: ENSG00000096696, DSP, desmoplakin, [Score=54.7, Expect=5e-06]} {Mouse: ENSMUSG00000054889, Dsp, desmoplakin, [Score=53.1, Expect=1e-05]} {Dmel: FBgn0013733, shot, short stop, [Score=78.6, Expect=2e-13]} {Celegans: WBGene00006876, vab-10, VAB-10B protein, [Score=68.2, Expect=2e-10]} {Smed: dd_Smed_v6_8220_0_6, dd_Smed_v6_8220_0_6, [Score=162, Expect=4e-39]} {RNA1509_44366, RNA1509_8849, RNA1509_993} {RNA1310_2457.1, RNA1509_44366, RNA1509_993} {RNA1509_44366, RNA1509_993, RNA815_701}
12.	MligTC455_26315	6236	129.91	Mlig455_068010	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.365	SQSTM1	0.953	-	-	-	0.953	-	-	Mlig455_068010 {REF} {Length: 5406} {Pfam: UBA domain [PF16577.7, score=51.0]; Zinc finger, ZZ type [PF00569.19, score=38.4]; PB1 domain [PF00564.26, score=22.7]} {Human: ENSG00000161011, SQSTM1, sequestosome 1, [Score=65.5, Expect=6e-11]; ENSG00000284099, AC008393.2, sequestosome 1, [Score=64.7, Expect=9e-11]} {Mouse: ENSMUSG00000015837, Sqstm1, sequestosome 1, [RH, Score=102, Expect=1e-23]} {Dmel: FBgn0037655, Kcmf1, Potassium channel modulatory factor 1, [Score=49.3, Expect=5e-06]} {Celegans: WBGene00011737, sqst-1, SeQueSTosome related, [Score=55.5, Expect=5e-08]} {RNA1509_911} {RNA1310_32633} {RNA815_1033}
13.	MligTC455_50107	2042	42.54	Mlig455_003436	Neo: - Age: logFC(26M/2M)=-0.352	TRPM3	0.95	-	-	-	-	0.950	-	Mlig455_003436 {REF} {Length: 3991} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=70.1]; Ankyrin repeats (many copies) [PF13637.8, score=67.3]; Ion transport protein [PF00520.33, score=59.6]; Ankyrin repeat [PF13606.8, score=58.4]; Ankyrin repeat [PF00023.32, score=44.8]; Ankyrin repeats (many copies) [PF13857.8, score=42.3]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=147, Expect=3e-35]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=150, Expect=3e-36]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=78.6, Expect=3e-14]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=82.0, Expect=2e-15]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [RH, Score=172, Expect=6e-44]} {RNA1509_2096, RNA1509_45967, RNA1509_47720} {RNA1310_2778.1, RNA1509_2096, RNA1509_45967, RNA1509_47720} {RNA1509_2096, RNA1509_45967, RNA1509_47720, RNA815_765}

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