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Results for MligTC455_39017

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_39017 222 4.63 Mlig455_033445

Neo: Int S/G2/M

Age: -

 TCEA2 Mlig455_033445 {REF} {Length: 1713} {Pfam: Transcription factor S-II (TFIIS), central domain [PF07500.16, score=114.2]; Transcription factor S-II (TFIIS) [PF01096.20, score=70.2]; TFIIS helical bundle-like domain [PF08711.13, score=33.7]} {Human: ENSG00000171703, TCEA2, transcription elongation factor A2, [RH, Score=257, Expect=3e-84]; ENSG00000187735, TCEA1, transcription elongation factor A1, [RH, Score=252, Expect=2e-82]} {Mouse: ENSMUSG00000033813, Tcea1, transcription elongation factor A (SII) 1, [RH, Score=247, Expect=2e-80]; ENSMUSG00000059540, Tcea2, transcription elongation factor A (SII), 2, [RH, Score=244, Expect=2e-79]; ENSMUSG00000001604, Tcea3, transcription elongation factor A (SII), 3, [RH, Score=237, Expect=4e-76]} {Dmel: FBgn0010422, TfIIS, RNA polymerase II elongation factor, [RH, Score=245, Expect=1e-79]} {Celegans: WBGene00012000, T24H10.1, Putative transcription elongation factor S-II, [RH, Score=213, Expect=2e-67]} {Smed: dd_Smed_v6_3176_0_1, dd_Smed_v6_3176_0_1, [RH, Score=251, Expect=5e-82]} {RNA1509_7459} {RNA1310_7696} {RNA815_8604}

Cumulative graph for MligTC455_39017

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.879 2.845 0.70412 1.00000
RegionR2 -0.034 2.845 0.96653 1.00000
RegionR3 -0.485 2.845 0.49496 0.99145
RegionR4 0.386 2.845 0.54769 0.86906
RegionR5 0.292 2.845 0.59180 0.94959
RegionR6 0.643 2.845 0.28934 0.88118
RegionR7 0.601 2.845 0.48744 1.00000
RegionR8 -0.525 2.845 0.70547 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.621 2.845 0.47969 1.00000
RegenerationR2 0.076 2.845 0.88063 1.00000
RegenerationR3 1.245 2.845 0.03410 0.32774
RegenerationR4 0.851 2.845 0.10102 0.49231
RegenerationR5 1.316 2.845 0.00299 0.09633
RegenerationR6 0.734 2.845 0.15845 0.48618
RegenerationBL -0.496 2.845 0.60569 0.95217
RegenerationTP 0.129 2.845 0.89634 1.00000


Genes with expression patterns similar to MligTC455_39017

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_39017 222 4.63 Mlig455_033445

Neo: Int S/G2/M

Age: -

 TCEA2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_033445 {REF} {Length: 1713} {Pfam: Transcription factor S-II (TFIIS), central domain [PF07500.16, score=114.2]; Transcription factor S-II (TFIIS) [PF01096.20, score=70.2]; TFIIS helical bundle-like domain [PF08711.13, score=33.7]} {Human: ENSG00000171703, TCEA2, transcription elongation factor A2, [RH, Score=257, Expect=3e-84]; ENSG00000187735, TCEA1, transcription elongation factor A1, [RH, Score=252, Expect=2e-82]} {Mouse: ENSMUSG00000033813, Tcea1, transcription elongation factor A (SII) 1, [RH, Score=247, Expect=2e-80]; ENSMUSG00000059540, Tcea2, transcription elongation factor A (SII), 2, [RH, Score=244, Expect=2e-79]; ENSMUSG00000001604, Tcea3, transcription elongation factor A (SII), 3, [RH, Score=237, Expect=4e-76]} {Dmel: FBgn0010422, TfIIS, RNA polymerase II elongation factor, [RH, Score=245, Expect=1e-79]} {Celegans: WBGene00012000, T24H10.1, Putative transcription elongation factor S-II, [RH, Score=213, Expect=2e-67]} {Smed: dd_Smed_v6_3176_0_1, dd_Smed_v6_3176_0_1, [RH, Score=251, Expect=5e-82]} {RNA1509_7459} {RNA1310_7696} {RNA815_8604}
2. MligTC455_22531 642 13.38 Mlig455_003820, Mlig455_019969, Mlig455_033265, Mlig455_048427, Mlig455_048495, Mlig455_048570, Mlig455_049044

Neo: -

Age: -

 RAD54L 1.833 - - - - 0.869 0.964

Mlig455_003820 {REF} {Length: 560} {Pfam: DDE superfamily endonuclease [PF13358.8, score=40.0]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=79.7, Expect=7e-20]} {RNA1509_20978} {RNA1310_8640} {RNA815_3193.1}

Mlig455_019969 {REF} {Length: 1046} {Pfam: Homeodomain-like domain [PF13384.8, score=50.0]; DDE superfamily endonuclease [PF13358.8, score=39.2]; Helix-turn-helix domain [PF13518.8, score=38.4]; Winged helix-turn helix [PF13551.8, score=34.3]; Homeodomain-like domain [PF13565.8, score=30.0]; Transposase [PF01498.20, score=28.3]; Winged helix-turn-helix DNA-binding [PF13412.8, score=24.9]; Helix-turn-helix [PF01381.24, score=20.4]; Helix-turn-helix domain of resolvase [PF02796.17, score=20.0]; CENP-B N-terminal DNA-binding domain [PF04218.15, score=18.1]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.4, Expect=9e-20]} {RNA1509_20978} {RNA1310_12978} {RNA815_3193.1}

Mlig455_033265 {REF} {Length: 560} {Pfam: DDE superfamily endonuclease [PF13358.8, score=39.9]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.4, Expect=5e-21]} {RNA1509_20978} {RNA1310_8640} {RNA815_3193.1}

Mlig455_048427 {REF} {Length: 872} {Pfam: DDE superfamily endonuclease [PF13358.8, score=39.6]; Homeodomain-like domain [PF13384.8, score=21.9]; Transposase [PF01498.20, score=21.2]; Helix-turn-helix [PF01381.24, score=20.9]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.4, Expect=5e-20]} {RNA1509_20978} {RNA1310_12978} {RNA815_3193.1}

Mlig455_048495 {REF} {Length: 3787} {Pfam: SNF2-related domain [PF00176.25, score=206.4]; Helicase conserved C-terminal domain [PF00271.33, score=52.6]; Homeodomain-like domain [PF13384.8, score=44.4]; Helix-turn-helix domain [PF13518.8, score=38.4]; DDE superfamily endonuclease [PF13358.8, score=36.4]; Winged helix-turn helix [PF13551.8, score=31.5]; Type III restriction enzyme, res subunit [PF04851.17, score=29.5]; Rad54 N terminal [PF08658.12, score=27.1]; Homeodomain-like domain [PF13565.8, score=25.8]; Helix-turn-helix [PF01381.24, score=23.9]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=22.0]; Transposase [PF01498.20, score=20.2]} {Human: ENSG00000085999, RAD54L, RAD54 like, [RH, Score=930, Expect=0.0]} {Mouse: ENSMUSG00000028702, Rad54l, RAD54 like (S. cerevisiae), [RH, Score=931, Expect=0.0]} {Dmel: FBgn0002989, okr, okra, [RH, Score=795, Expect=0.0]} {Celegans: WBGene00004298, rad-54, [RH, Score=804, Expect=0.0]} {Smed: dd_Smed_v6_15532_0_1, dd_Smed_v6_15532_0_1, [RH, Score=947, Expect=0.0]} {RNA1509_38919} {RNA1310_7218} {RNA815_1852.1}

Mlig455_048570 {REF} {Length: 872} {Pfam: DDE superfamily endonuclease [PF13358.8, score=39.6]; Homeodomain-like domain [PF13384.8, score=21.9]; Transposase [PF01498.20, score=21.2]; Helix-turn-helix [PF01381.24, score=20.9]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.4, Expect=5e-20]} {RNA1509_20978} {RNA1310_12978} {RNA815_3193.1}

Mlig455_049044 {REF} {Length: 965} {Pfam: DDE superfamily endonuclease [PF13358.8, score=37.0]; Homeodomain-like domain [PF13384.8, score=21.1]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.8, Expect=6e-20]} {RNA1509_20978} {RNA1310_12978} {RNA815_3193.1}
3. MligTC455_43628 537 11.19 Mlig455_001214

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 1.841/0.00696

Regeneration-upregulated BL: 2.235

Regeneration-enriched BL: 2.235

 G2E3 1.716 - - 0.759 - - 0.957 Mlig455_001214 {REF} {Length: 2124} {Pfam: PHD-like zinc-binding domain [PF13771.8, score=44.7]} {Human: ENSG00000092140, G2E3, G2/M-phase specific E3 ubiquitin protein ligase, [RH, Score=154, Expect=3e-40]} {Mouse: ENSMUSG00000035293, G2e3, G2/M-phase specific E3 ubiquitin ligase, [RH, Score=142, Expect=2e-36]; ENSMUSG00000021902, Phf7, PHD finger protein 7, [RH, Score=137, Expect=9e-37]} {Dmel: FBgn0005683, pie, pineapple eye, [RH, Score=110, Expect=6e-26]} {Smed: dd_Smed_v6_6301_0_1, dd_Smed_v6_6301_0_1, [RH, Score=116, Expect=3e-28]} {RNA1509_27373} {RNA1310_12923.1, RNA1509_27373} {RNA1509_27373, RNA815_4856}
4. MligTC455_46874 710 14.79 Mlig455_027558

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 1.389/0.00017
Region-enriched R4: 1.115/0.03867

 IQGAP2 1.696 - - - 0.744 - 0.952 Mlig455_027558 {REF} {Length: 6504} {TRANSSPLICED} {Pfam: GTPase-activator protein for Ras-like GTPase [PF00616.21, score=75.4]; RasGAP C-terminus [PF03836.17, score=60.5]; Calponin homology (CH) domain [PF00307.33, score=56.6]; IQ calmodulin-binding motif [PF00612.29, score=29.7]} {Human: ENSG00000145703, IQGAP2, IQ motif containing GTPase activating protein 2, [RH, Score=665, Expect=0.0]} {Mouse: ENSMUSG00000030536, Iqgap1, IQ motif containing GTPase activating protein 1, [RH, Score=489, Expect=3e-145]; ENSMUSG00000021676, Iqgap2, IQ motif containing GTPase activating protein 2, [RH, Score=469, Expect=2e-138]} {Dmel: FBgn0002789, Mp20, Muscle protein 20, [Score=63.9, Expect=6e-11]} {Celegans: WBGene00003980, pes-7, Patterned Expression Site, [RH, Score=160, Expect=4e-39]} {Smed: dd_Smed_v6_103369_0_1, dd_Smed_v6_103369_0_1, [RH, Score=56.6, Expect=7e-10]} {RNA1509_11024, RNA1509_7643} {RNA1310_1089.1, RNA1509_11024, RNA1509_7643} {RNA1509_11024, RNA1509_7643, RNA815_3828}
5. MligTC455_32444 279 5.81 Mlig455_063483

Neo: -

Age: -

 MANBA 1.674 - - 0.723 - 0.951 - Mlig455_063483 {REF} {Length: 3695} {Pfam: Glycosyl hydrolases family 2 [PF00703.23, score=22.7]; Glycosyl hydrolases family 2, sugar binding domain [PF02837.20, score=20.4]} {Human: ENSG00000109323, MANBA, mannosidase beta, [RH, Score=462, Expect=2e-147]} {Mouse: ENSMUSG00000028164, Manba, mannosidase, beta A, lysosomal, [RH, Score=466, Expect=2e-149]} {Dmel: FBgn0037215, beta-Man, beta-Mannosidase, [RH, Score=377, Expect=1e-115]} {Celegans: WBGene00007904, C33G3.4, Probable beta-mannosidase, [RH, Score=396, Expect=5e-123]} {Smed: dd_Smed_v6_3209_0_1, dd_Smed_v6_3209_0_1, [RH, Score=368, Expect=2e-112]} {RNA1509_27646, RNA1509_41233} {RNA1310_1571.1, RNA1509_27646, RNA1509_41233} {RNA1509_27646, RNA1509_41233, RNA815_798.1}
6. MligTC455_52150 1796 37.43 Mlig455_017153, Mlig455_019691

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 1.317/0.00005

Regeneration-enriched R6: 1.860
Regeneration-enriched BL: 1.487

 NFYB 0.963 - - - - - 0.963

Mlig455_017153 {REF} {Length: 1341} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=92.1]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=24.4]} {Human: ENSG00000120837, NFYB, nuclear transcription factor Y subunit beta, [RH, Score=157, Expect=2e-48]} {Mouse: ENSMUSG00000020248, Nfyb, nuclear transcription factor-Y beta, [RH, Score=159, Expect=2e-49]} {Dmel: FBgn0032816, Nf-YB, Nuclear factor Y-box B, [RH, Score=137, Expect=2e-41]} {Celegans: WBGene00021132, nfyb-1, Nuclear transcription Factor Y, B (Beta) subunit, [RH, Score=126, Expect=8e-35]} {Smed: dd_Smed_v6_2532_0_1, dd_Smed_v6_2532_0_1, [RH, Score=159, Expect=2e-49]} {RNA1509_23597} {RNA1310_12347} {RNA815_3697}

Mlig455_019691 {REF} {Length: 1271} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=92.1]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=24.5]} {Human: ENSG00000120837, NFYB, nuclear transcription factor Y subunit beta, [RH, Score=158, Expect=1e-48]} {Mouse: ENSMUSG00000020248, Nfyb, nuclear transcription factor-Y beta, [RH, Score=159, Expect=2e-49]} {Dmel: FBgn0032816, Nf-YB, Nuclear factor Y-box B, [RH, Score=137, Expect=2e-41]} {Celegans: WBGene00021132, nfyb-1, Nuclear transcription Factor Y, B (Beta) subunit, [RH, Score=126, Expect=6e-35]} {Smed: dd_Smed_v6_2532_0_1, dd_Smed_v6_2532_0_1, [RH, Score=160, Expect=6e-50]} {RNA1509_21762, RNA1509_23597, RNA1509_4385} {RNA1310_12347, RNA1509_21762, RNA1509_23597, RNA1509_4385} {RNA1509_21762, RNA1509_23597, RNA1509_4385, RNA815_3697}
7. MligTC455_31252 894 18.62 Mlig455_016030, Mlig455_054951, Mlig455_054965

Neo: Int S/G2/M

Age: Up-Down-Down

Region-enriched R5: 1.348/0.03896

 0.952 - - - - - 0.952

Mlig455_016030 {REF} {Length: 7387} {TRANSSPLICED} {Pfam: Rough deal protein C-terminal region [PF10493.11, score=42.1]} {RNA1509_4327} {RNA1310_538} {RNA815_243.1}

Mlig455_054951 {REF} {Length: 7408} {TRANSSPLICED} {Pfam: Rough deal protein C-terminal region [PF10493.11, score=42.1]} {RNA1509_4327} {RNA1310_538, RNA1509_4327} {RNA1509_4327, RNA815_243.1}

Mlig455_054965 {REF} {Length: 8214} {TRANSSPLICED} {Pfam: Rough deal protein C-terminal region [PF10493.11, score=41.8]} {RNA1509_4327} {RNA1310_538} {RNA815_243.1}
8. MligTC455_41163 770 16.05 Mlig455_025270, Mlig455_025298

Neo: Int S/G2/M

Age: Up-Down-Down

 NFYA 0.951 - - 0.951 - - -

Mlig455_025270 {REF} {Length: 1903} {TRANSSPLICED} {Pfam: CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B [PF02045.17, score=98.9]} {Human: ENSG00000001167, NFYA, nuclear transcription factor Y subunit alpha, [RH, Score=123, Expect=5e-33]} {Mouse: ENSMUSG00000023994, Nfya, nuclear transcription factor-Y alpha, [RH, Score=123, Expect=3e-33]; ENSMUSG00000115906, Nfya, nuclear transcription factor-Y alpha, [RH, Score=123, Expect=3e-33]} {Dmel: FBgn0035993, Nf-YA, Nuclear factor Y-box A, [RH, Score=104, Expect=5e-26]} {Celegans: WBGene00011614, nfya-1, Nuclear transcription Factor Y, A (Alpha) subunit, [RH, Score=81.3, Expect=1e-17]} {Smed: dd_Smed_v6_8585_0_1, dd_Smed_v6_8585_0_1, [RH, Score=124, Expect=6e-36]} {RNA1509_29833} {RNA1310_34280} {RNA815_9129}

Mlig455_025298 {REF} {Length: 1916} {TRANSSPLICED} {Pfam: CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B [PF02045.17, score=98.9]} {Human: ENSG00000001167, NFYA, nuclear transcription factor Y subunit alpha, [RH, Score=123, Expect=5e-33]} {Mouse: ENSMUSG00000023994, Nfya, nuclear transcription factor-Y alpha, [RH, Score=123, Expect=3e-33]; ENSMUSG00000115906, Nfya, nuclear transcription factor-Y alpha, [RH, Score=123, Expect=3e-33]} {Dmel: FBgn0035993, Nf-YA, Nuclear factor Y-box A, [RH, Score=104, Expect=5e-26]} {Celegans: WBGene00011614, nfya-1, Nuclear transcription Factor Y, A (Alpha) subunit, [RH, Score=81.3, Expect=1e-17]} {Smed: dd_Smed_v6_8585_0_1, dd_Smed_v6_8585_0_1, [RH, Score=124, Expect=6e-36]} {RNA1509_29833} {RNA1310_34280} {RNA815_9129}
9. MligTC455_53704 197 4.11 Mlig455_025862

Neo: -

Age: Up-Down-Up

Region-enriched R5: 1.567/0.04208

 GTF2F2 0.951 - - - - - 0.951 Mlig455_025862 {REF} {Length: 2441} {TRANSSPLICED} {Pfam: TFIIF, beta subunit HTH domain [PF02270.17, score=79.3]; TFIIF, beta subunit N-terminus [PF17683.3, score=40.4]} {Human: ENSG00000188342, GTF2F2, general transcription factor IIF subunit 2, [RH, Score=176, Expect=3e-53]} {Mouse: ENSMUSG00000067995, Gtf2f2, general transcription factor IIF, polypeptide 2, [RH, Score=175, Expect=7e-53]} {Dmel: FBgn0010421, TfIIFbeta, Transcription factor TFIIFbeta, [RH, Score=164, Expect=3e-48]} {Celegans: WBGene00012694, Y39B6A.36, General transcription factor IIF subunit 2, [RH, Score=129, Expect=2e-35]} {Smed: dd_Smed_v6_2142_0_1, dd_Smed_v6_2142_0_1, [RH, Score=95.1, Expect=1e-22]} {RNA1509_11554} {RNA1310_14522} {RNA815_1242.1}

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