TomoSeq data search

Data search

Results for MligTC455_41744

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41744

975

20.32

Mlig455_043745, Mlig455_047480

Neo: -

Age: -

CERS5

Mlig455_043745 {REF} {Length: 2514} {TRANSSPLICED} {Pfam: TLC domain [PF03798.18, score=143.0]; Homeodomain [PF00046.31, score=27.4]} {Human: ENSG00000139624, CERS5, ceramide synthase 5, [RH, Score=249, Expect=2e-79]; ENSG00000143418, CERS2, ceramide synthase 2, [RH, Score=239, Expect=1e-75]; ENSG00000172292, CERS6, ceramide synthase 6, [RH, Score=238, Expect=7e-75]} {Mouse: ENSMUSG00000023021, Cers5, ceramide synthase 5, [RH, Score=269, Expect=6e-87]} {Dmel: FBgn0040918, schlank, [RH, Score=226, Expect=1e-70]} {Celegans: WBGene00002043, hyl-1, Ceramide synthase hyl-1, [RH, Score=159, Expect=4e-46]} {Smed: dd_Smed_v6_4223_0_1, dd_Smed_v6_4223_0_1, [RH, Score=236, Expect=5e-75]} {RNA1509_46469, RNA1509_47741} {RNA1310_13424.2, RNA1509_47741} {RNA1509_47741, RNA815_10078.1}

Mlig455_047480 {REF} {Length: 2921} {Pfam: TLC domain [PF03798.18, score=143.0]; Homeodomain [PF00046.31, score=27.4]} {Human: ENSG00000139624, CERS5, ceramide synthase 5, [RH, Score=249, Expect=3e-79]; ENSG00000143418, CERS2, ceramide synthase 2, [RH, Score=239, Expect=1e-75]; ENSG00000172292, CERS6, ceramide synthase 6, [RH, Score=237, Expect=8e-75]} {Mouse: ENSMUSG00000023021, Cers5, ceramide synthase 5, [RH, Score=270, Expect=2e-87]} {Dmel: FBgn0040918, schlank, [RH, Score=227, Expect=4e-71]} {Celegans: WBGene00002043, hyl-1, Ceramide synthase hyl-1, [RH, Score=159, Expect=4e-46]} {Smed: dd_Smed_v6_4223_0_1, dd_Smed_v6_4223_0_1, [RH, Score=234, Expect=1e-74]} {RNA1509_46469} {RNA1310_13424.2} {RNA815_10078.1}

Cumulative graph for MligTC455_41744

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.316	4.596	0.77199	1.00000
RegionR2	-0.211	4.596	0.63106	0.97188
RegionR3	-0.365	4.596	0.33349	0.87160
RegionR4	0.368	4.596	0.43541	0.76434
RegionR5	0.344	4.596	0.31235	0.65123
RegionR6	0.06	4.596	0.87027	1.00000
RegionR7	0.152	4.596	0.72813	1.00000
RegionR8	-0.031	4.596	0.95357	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.355	4.596	0.79687	1.00000
RegenerationR2	-0.071	4.596	0.85408	1.00000
RegenerationR3	-0.432	4.596	0.32200	0.75022
RegenerationR4	-0.175	4.596	0.70271	0.95483
RegenerationR5	-0.641	4.596	0.11487	0.51036
RegenerationR6	-0.517	4.596	0.23137	0.57810
RegenerationBL	0.788	4.596	0.06168	0.28858
RegenerationTP	-1.806	4.596	0.00236	0.07907

Genes with expression patterns similar to MligTC455_41744

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41744	975	20.32	Mlig455_043745, Mlig455_047480	Neo: - Age: -	CERS5	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_043745 {REF} {Length: 2514} {TRANSSPLICED} {Pfam: TLC domain [PF03798.18, score=143.0]; Homeodomain [PF00046.31, score=27.4]} {Human: ENSG00000139624, CERS5, ceramide synthase 5, [RH, Score=249, Expect=2e-79]; ENSG00000143418, CERS2, ceramide synthase 2, [RH, Score=239, Expect=1e-75]; ENSG00000172292, CERS6, ceramide synthase 6, [RH, Score=238, Expect=7e-75]} {Mouse: ENSMUSG00000023021, Cers5, ceramide synthase 5, [RH, Score=269, Expect=6e-87]} {Dmel: FBgn0040918, schlank, [RH, Score=226, Expect=1e-70]} {Celegans: WBGene00002043, hyl-1, Ceramide synthase hyl-1, [RH, Score=159, Expect=4e-46]} {Smed: dd_Smed_v6_4223_0_1, dd_Smed_v6_4223_0_1, [RH, Score=236, Expect=5e-75]} {RNA1509_46469, RNA1509_47741} {RNA1310_13424.2, RNA1509_47741} {RNA1509_47741, RNA815_10078.1} Mlig455_047480 {REF} {Length: 2921} {Pfam: TLC domain [PF03798.18, score=143.0]; Homeodomain [PF00046.31, score=27.4]} {Human: ENSG00000139624, CERS5, ceramide synthase 5, [RH, Score=249, Expect=3e-79]; ENSG00000143418, CERS2, ceramide synthase 2, [RH, Score=239, Expect=1e-75]; ENSG00000172292, CERS6, ceramide synthase 6, [RH, Score=237, Expect=8e-75]} {Mouse: ENSMUSG00000023021, Cers5, ceramide synthase 5, [RH, Score=270, Expect=2e-87]} {Dmel: FBgn0040918, schlank, [RH, Score=227, Expect=4e-71]} {Celegans: WBGene00002043, hyl-1, Ceramide synthase hyl-1, [RH, Score=159, Expect=4e-46]} {Smed: dd_Smed_v6_4223_0_1, dd_Smed_v6_4223_0_1, [RH, Score=234, Expect=1e-74]} {RNA1509_46469} {RNA1310_13424.2} {RNA815_10078.1}
2.	MligTC455_46817	736	15.34	Mlig455_064460	Neo: - Age: Up-Down-Down		2.541	-	-	0.846	0.950	0.745	-	Mlig455_064460 {REF} {Length: 6879} {TRANSSPLICED} {Pfam: Orn/Lys/Arg decarboxylase, major domain [PF01276.22, score=337.9]; Aminotransferase class I and II [PF00155.23, score=31.1]; Orn/Lys/Arg decarboxylase, C-terminal domain [PF03711.17, score=26.6]; Beta-eliminating lyase [PF01212.23, score=24.2]; Cys/Met metabolism PLP-dependent enzyme [PF01053.22, score=17.6]} {RNA1509_14578, RNA1509_238, RNA1509_39655, RNA1509_55287, RNA1509_7793} {RNA1310_10264.1, RNA1509_14578, RNA1509_238, RNA1509_39655, RNA1509_55287, RNA1509_7793} {RNA1509_14578, RNA1509_238, RNA1509_39655, RNA1509_55287, RNA1509_7793, RNA815_2364.1}
3.	MligTC455_03539	348	7.26	Mlig455_008698	Neo: - Age: -		1.825	-	-	0.873	0.952	-	-	Mlig455_008698 {REF} {Length: 854} {NoTransDecoderORF} {RNA1509_55686} {RNA1310_45961, RNA1509_55686} {RNA1509_55686, RNA815_23040}
4.	MligTC455_37017	345	7.2	Mlig455_035238	Neo: - Age: -		1.724	-	-	-	0.744	-	0.980	Mlig455_035238 {REF} {Length: 1969} {TRANSSPLICED} {Pfam: Profilin [PF00235.21, score=70.1]} {Celegans: WBGene00003991, pfn-3, Profilin-3, [Score=50.4, Expect=9e-09]} {RNA1509_18199, RNA1509_28431} {RNA1310_37032.1, RNA1509_28431} {RNA1509_28431, RNA815_15418}
5.	MligTC455_49097	139	2.9	Mlig455_015582	Neo: - Age: -	ANK1	1.676	-	-	0.720	0.956	-	-	Mlig455_015582 {REF} {Length: 802} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=229.5]; Ankyrin repeats (many copies) [PF13857.8, score=180.9]; Ankyrin repeat [PF00023.32, score=180.0]; Ankyrin repeats (many copies) [PF13637.8, score=175.2]; Ankyrin repeat [PF13606.8, score=146.6]; Mab-21 protein [PF03281.16, score=31.8]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=228, Expect=2e-60]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=221, Expect=3e-58]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=223, Expect=6e-59]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=204, Expect=3e-53]} {Smed: dd_Smed_v6_10835_0_2, dd_Smed_v6_10835_0_2, [Score=209, Expect=7e-55]} {RNA1509_11045} {RNA1310_2508.1} {RNA815_791}
6.	MligTC455_28801	55	1.14	Mlig455_041745	Neo: - Age: -	RTL1	1.661	-	-	-	0.703	-	0.958	Mlig455_041745 {REF} {Length: 7682} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=98.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=98.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=91.2]; Aspartyl protease [PF09668.12, score=25.8]; gag-polyprotein putative aspartyl protease [PF13975.8, score=25.4]; Aspartyl protease [PF13650.8, score=22.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=107, Expect=6e-23]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=90.9, Expect=7e-18]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=90.9, Expect=7e-18]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=323, Expect=5e-98]} {RNA1509_53012} {RNA1310_832} {RNA815_19380}
7.	MligTC455_44214	826	17.2	Mlig455_051977	Neo: - Age: logFC(26M/2M)=-0.586	TRPM3	0.964	-	-	-	0.964	-	-	Mlig455_051977 {REF} {Length: 7693} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=181.9]; Ankyrin repeats (many copies) [PF13637.8, score=159.2]; Ankyrin repeat [PF13606.8, score=83.5]; Ankyrin repeats (many copies) [PF13857.8, score=69.7]; Ankyrin repeat [PF00023.32, score=40.0]; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF13669.8, score=19.8]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=88.6, Expect=1e-16]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=88.6, Expect=7e-17]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=84.3, Expect=1e-15]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=77.8, Expect=1e-13]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=89.7, Expect=2e-17]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=115, Expect=1e-25]} {RNA1509_3976, RNA1509_45452, RNA1509_49658} {RNA1310_537, RNA1509_3976, RNA1509_45452, RNA1509_49658} {RNA1509_3976, RNA1509_45452, RNA1509_49658, RNA815_57.1}
8.	MligTC455_31727	319	6.64	Mlig455_052802	Neo: - Age: - Region-enriched R2: 1.942/0.03690	BBS7	0.962	-	-	-	-	-	0.962	Mlig455_052802 {REF} {Length: 3681} {TRANSSPLICED} {Pfam: Ciliary BBSome complex subunit 2, middle region [PF14783.8, score=24.7]; FG-GAP-like repeat [PF13517.8, score=19.2]} {Human: ENSG00000138686, BBS7, Bardet-Biedl syndrome 7, [RH, Score=736, Expect=0.0]} {Mouse: ENSMUSG00000037325, Bbs7, Bardet-Biedl syndrome 7 (human), [RH, Score=730, Expect=0.0]} {Celegans: WBGene00003892, osm-12, Bardet-Biedl syndrome 7 protein homolog, [RH, Score=395, Expect=1e-127]} {Smed: dd_Smed_v6_15015_0_1, dd_Smed_v6_15015_0_1, [RH, Score=645, Expect=0.0]} {RNA1509_7138} {RNA1310_7894, RNA1509_7138} {RNA1509_7138, RNA815_2924}
9.	MligTC455_53610	244	5.08	Mlig455_039699	Neo: - Age: Down-Up-Up	IAH1	0.962	-	-	-	-	-	0.962	Mlig455_039699 {REF} {Length: 1930} {Pfam: EF hand [PF00036.34, score=102.3]; EF-hand domain pair [PF13499.8, score=82.1]; EF hand [PF13202.8, score=78.8]; EF-hand domain [PF13405.8, score=78.6]; GDSL-like Lipase/Acylhydrolase family [PF13472.8, score=75.7]; EF-hand domain pair [PF13833.8, score=63.7]; GDSL-like Lipase/Acylhydrolase [PF00657.24, score=36.2]; EF-hand domain [PF14658.8, score=27.6]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=25.3]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=25.2]} {Human: ENSG00000134330, IAH1, isoamyl acetate hydrolyzing esterase 1 (putative), [RH, Score=144, Expect=3e-40]} {Mouse: ENSMUSG00000062054, Iah1, isoamyl acetate-hydrolyzing esterase 1 homolog, [RH, Score=140, Expect=1e-38]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=132, Expect=6e-37]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=132, Expect=4e-37]} {Smed: dd_Smed_v6_6241_0_1, dd_Smed_v6_6241_0_1, [RH, Score=154, Expect=1e-44]} {RNA1509_23387} {RNA1310_28931.1} {RNA815_15469}
10.	MligTC455_35517	1775	36.99	Mlig455_058832	Neo: - Age: -	SPEN	0.955	-	-	-	0.955	-	-	Mlig455_058832 {REF} {Length: 6056} {Pfam: SPOC domain [PF07744.15, score=114.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=81.8]; Occluded RNA-recognition motif [PF16842.7, score=34.0]} {Human: ENSG00000065526, SPEN, spen family transcriptional repressor, [RH, Score=208, Expect=2e-53]} {Mouse: ENSMUSG00000040761, Spen, spen family transcription repressor, [RH, Score=209, Expect=1e-53]} {Dmel: FBgn0016977, spen, split ends, [RH, Score=204, Expect=3e-52]} {Celegans: WBGene00008549, din-1, Daf-12-interacting protein 1, [RH, Score=97.8, Expect=6e-20]} {Smed: dd_Smed_v6_6458_0_1, dd_Smed_v6_6458_0_1, [Score=187, Expect=2e-47]} {RNA1509_1106, RNA1509_18970, RNA1509_57047} {RNA1310_665, RNA1509_1106, RNA1509_18970, RNA1509_57047} {RNA1509_1106, RNA1509_18970, RNA1509_57047, RNA815_665}
11.	MligTC455_15494	299	6.23	Mlig455_003802	Neo: - Age: -		0.953	-	-	-	0.953	-	-	Mlig455_003802 {REF} {Length: 2576} {RNA1509_23541} {RNA1310_23341.1} {RNA815_11967.1}
12.	MligTC455_40915	873	18.19	Mlig455_042099	Neo: - Age: -	SLC22A24	0.953	-	-	-	0.953	-	-	Mlig455_042099 {REF} {Length: 4000} {Pfam: Sugar (and other) transporter [PF00083.26, score=102.5]; Major Facilitator Superfamily [PF07690.18, score=76.5]} {Human: ENSG00000197658, SLC22A24, solute carrier family 22 member 24, [Score=119, Expect=2e-27]; ENSG00000197901, SLC22A6, solute carrier family 22 member 6, [Score=115, Expect=1e-26]} {Mouse: ENSMUSG00000023828, Slc22a3, solute carrier family 22 (organic cation transporter), member 3, [Score=121, Expect=1e-28]} {Dmel: FBgn0039178, CG6356, [Score=127, Expect=1e-30]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=125, Expect=5e-30]} {Smed: dd_Smed_v6_10826_0_2, dd_Smed_v6_10826_0_2, [Score=85.9, Expect=2e-17]} {RNA1509_14287, RNA1509_8510} {RNA1310_10700.1, RNA1509_14287, RNA1509_8510} {RNA1509_14287, RNA1509_8510, RNA815_2513}
13.	MligTC455_26503	114	2.37	Mlig455_055217	Neo: Int S/G2/M Age: - Region-enriched R4: 7.372/0.00058	CPSF6	0.952	-	-	-	-	-	0.952	Mlig455_055217 {REF} {Length: 5089} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=26.5]} {Human: ENSG00000111605, CPSF6, cleavage and polyadenylation specific factor 6, [RH, Score=139, Expect=1e-34]} {Mouse: ENSMUSG00000055531, Cpsf6, cleavage and polyadenylation specific factor 6, [RH, Score=139, Expect=2e-34]} {Dmel: FBgn0035872, CG7185, [RH, Score=133, Expect=3e-32]} {Celegans: WBGene00008362, cfim-2, Cleavage Factor IM (CFIm) homolog, [RH, Score=96.7, Expect=7e-21]} {Smed: dd_Smed_v6_4839_0_1, dd_Smed_v6_4839_0_1, [RH, Score=152, Expect=2e-39]} {RNA1509_8357} {RNA1310_5998} {RNA815_15488}
14.	MligTC455_52941	123	2.57	Mlig455_047636	Neo: - Age: - Regeneration-upregulated BL: 5.109 Regeneration-enriched BL: 5.109		0.95	-	-	-	-	-	0.950	Mlig455_047636 {REF} {Length: 729} {NoTransDecoderORF} {RNA1509_35506} {RNA1310_3152.3} {RNA815_54245}

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