Data search
Results for MligTC455_42048
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42048 | 333 | 6.94 | Mlig455_027137 | Neo: - Age: - |
Mlig455_027137 {REF} {Length: 1224} {Pfam: CUE domain [PF02845.18, score=19.0]} {RNA1509_54789} {RNA1310_19777} {RNA815_7846} |
Cumulative graph for MligTC455_42048
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.552 | 3.363 | 0.64973 | 1.00000 | |
| RegionR2 | 1.124 | 3.363 | 0.08438 | 0.35681 | |
| RegionR3 | 0.291 | 3.363 | 0.56523 | 1.00000 | |
| RegionR4 | -0.172 | 3.363 | 0.75758 | 1.00000 | |
| RegionR5 | 0.187 | 3.363 | 0.67222 | 1.00000 | |
| RegionR6 | -0.056 | 3.363 | 0.91497 | 1.00000 | |
| RegionR7 | 0.1 | 3.363 | 0.87821 | 1.00000 | |
| RegionR8 | -0.921 | 3.363 | 0.36678 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.213 | 3.363 | 0.32249 | 1.00000 | |
| RegenerationR2 | -0.38 | 3.363 | 0.49109 | 0.86808 | |
| RegenerationR3 | -0.004 | 3.363 | 0.99525 | 1.00000 | |
| RegenerationR4 | -0.733 | 3.363 | 0.23088 | 0.67967 | |
| RegenerationR5 | -0.044 | 3.363 | 0.93847 | 1.00000 | |
| RegenerationR6 | 0.323 | 3.363 | 0.61047 | 0.87451 | |
| RegenerationBL | -0.706 | 3.363 | 0.48503 | 0.85039 | |
| RegenerationTP | 0.899 | 3.363 | 0.30196 | 0.74765 |
Genes with expression patterns similar to MligTC455_42048
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42048 | 333 | 6.94 | Mlig455_027137 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_027137 {REF} {Length: 1224} {Pfam: CUE domain [PF02845.18, score=19.0]} {RNA1509_54789} {RNA1310_19777} {RNA815_7846} | |
| 2. | MligTC455_42049 | 1887 | 39.32 | Mlig455_027189, Mlig455_030708 | Neo: - Age: - Region-enriched R4: 1.193/0.00320 |
3.521 | 0.995 | 0.969 | - | - | 0.737 | 0.820 | Mlig455_027189 {REF} {Length: 1388} {TRANSSPLICED} {Pfam: CUE domain [PF02845.18, score=18.4]} {RNA1509_40462} {RNA1310_19777} {RNA815_7846} Mlig455_030708 {REF} {Length: 1383} {TRANSSPLICED} {Pfam: CUE domain [PF02845.18, score=18.6]} {RNA1509_40462, RNA1509_54491, RNA1509_54789} {RNA1310_19777, RNA1509_40462, RNA1509_54491, RNA1509_54789} {RNA1509_40462, RNA1509_54491, RNA1509_54789, RNA815_7846} |
|
| 3. | MligTC455_40662 | 520 | 10.84 | Mlig455_050390 | Neo: - Age: - Region-enriched R4: 1.266/0.02674 |
1.694 | - | - | 0.739 | - | - | 0.955 | Mlig455_050390 {REF} {Length: 1035} {TRANSSPLICED} {RNA1509_28209} {RNA1310_36562} {RNA815_14595} | |
| 4. | MligTC455_44893 | 215 | 4.47 | Mlig455_020672 | Neo: Irradiation Age: - |
SMARCC2 | 1.681 | - | - | - | 0.714 | 0.967 | - | Mlig455_020672 {REF} {Length: 2246} {TRANSSPLICED} {Pfam: SWIRM domain [PF04433.19, score=107.7]; SWIRM-associated region 1 [PF16495.7, score=79.7]; SWIRM-associated domain at the C-terminal [PF16498.7, score=49.2]; Myb-like DNA-binding domain [PF00249.33, score=42.7]; Myb-like DNA-binding domain [PF13921.8, score=28.7]} {Human: ENSG00000139613, SMARCC2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, [RH, Score=450, Expect=3e-144]} {Mouse: ENSMUSG00000025369, Smarcc2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2, [RH, Score=451, Expect=8e-146]} {Dmel: FBgn0002783, mor, moira, [RH, Score=339, Expect=3e-103]} {Celegans: WBGene00004203, swsn-1, SWI/SNF nucleosome remodeling complex component; SWI3-like protein, [RH, Score=331, Expect=1e-103]} {Smed: dd_Smed_v6_1804_0_1, dd_Smed_v6_1804_0_1, [RH, Score=405, Expect=2e-127]} {RNA1509_39768, RNA1509_54926} {RNA1310_5494.1, RNA1509_39768, RNA1509_54926} {RNA1509_39768, RNA1509_54926, RNA815_8217} |
| 5. | MligTC455_53207 | 912 | 18.99 | Mlig455_008631, Mlig455_030293 | Neo: - Age: - |
PRKAA2 | 0.969 | - | - | - | - | - | 0.969 | Mlig455_008631 {REF} {Length: 3741} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=254.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=147.7]; Adenylate sensor of SNF1-like protein kinase [PF16579.7, score=39.0]; ABC1 atypical kinase-like domain [PF03109.18, score=28.8]; Kinase-like [PF14531.8, score=27.5]; RIO1 family [PF01163.24, score=22.0]} {Human: ENSG00000162409, PRKAA2, protein kinase AMP-activated catalytic subunit alpha 2, [RH, Score=569, Expect=0.0]} {Mouse: ENSMUSG00000028518, Prkaa2, protein kinase, AMP-activated, alpha 2 catalytic subunit, [Score=569, Expect=0.0]; ENSMUSG00000050697, Prkaa1, protein kinase, AMP-activated, alpha 1 catalytic subunit, [Score=543, Expect=0.0]} {Dmel: FBgn0023169, AMPKalpha, AMP-activated protein kinase alpha subunit, [RH, Score=583, Expect=0.0]} {Celegans: WBGene00020142, aak-2, 5'-AMP-activated protein kinase catalytic subunit alpha-2, [RH, Score=544, Expect=0.0]} {Smed: dd_Smed_v6_2538_0_1, dd_Smed_v6_2538_0_1, [RH, Score=607, Expect=0.0]} {RNA1509_26070} {RNA1310_12782.1} {RNA815_11226} Mlig455_030293 {REF} {Length: 3953} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=254.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=147.7]; Adenylate sensor of SNF1-like protein kinase [PF16579.7, score=39.0]; ABC1 atypical kinase-like domain [PF03109.18, score=28.8]; Kinase-like [PF14531.8, score=27.6]; RIO1 family [PF01163.24, score=22.0]} {Human: ENSG00000162409, PRKAA2, protein kinase AMP-activated catalytic subunit alpha 2, [RH, Score=571, Expect=0.0]} {Mouse: ENSMUSG00000028518, Prkaa2, protein kinase, AMP-activated, alpha 2 catalytic subunit, [RH, Score=568, Expect=0.0]} {Dmel: FBgn0023169, AMPKalpha, AMP-activated protein kinase alpha subunit, [RH, Score=583, Expect=0.0]} {Celegans: WBGene00020142, aak-2, 5'-AMP-activated protein kinase catalytic subunit alpha-2, [RH, Score=544, Expect=0.0]} {Smed: dd_Smed_v6_2538_0_1, dd_Smed_v6_2538_0_1, [RH, Score=606, Expect=0.0]} {RNA1509_26070} {RNA1310_12782.1} {RNA815_11226} |
| 6. | MligTC455_43164 | 605 | 12.61 | Mlig455_049154, Mlig455_049205 | Neo: - Age: - Region-enriched R4: 2.209/0.03202 |
MFSD2A | 0.963 | - | - | - | - | - | 0.963 | Mlig455_049154 {REF} {Length: 3876} {Pfam: MFS/sugar transport protein [PF13347.8, score=257.2]; Major Facilitator Superfamily [PF07690.18, score=33.5]} {Human: ENSG00000168389, MFSD2A, major facilitator superfamily domain containing 2A, [Score=218, Expect=3e-63]; ENSG00000205639, MFSD2B, major facilitator superfamily domain containing 2B, [Score=209, Expect=5e-60]} {Mouse: ENSMUSG00000028655, Mfsd2a, major facilitator superfamily domain containing 2A, [Score=216, Expect=1e-62]; ENSMUSG00000037336, Mfsd2b, major facilitator superfamily domain containing 2B, [Score=207, Expect=1e-59]} {Smed: dd_Smed_v6_11210_0_1, dd_Smed_v6_11210_0_1, [Score=275, Expect=1e-84]} {RNA1509_40466} {RNA1310_2075.2} {RNA815_16022} Mlig455_049205 {REF} {Length: 3844} {Pfam: MFS/sugar transport protein [PF13347.8, score=257.2]; Major Facilitator Superfamily [PF07690.18, score=33.5]} {Human: ENSG00000168389, MFSD2A, major facilitator superfamily domain containing 2A, [Score=218, Expect=3e-63]; ENSG00000205639, MFSD2B, major facilitator superfamily domain containing 2B, [Score=209, Expect=5e-60]} {Mouse: ENSMUSG00000028655, Mfsd2a, major facilitator superfamily domain containing 2A, [Score=216, Expect=1e-62]; ENSMUSG00000037336, Mfsd2b, major facilitator superfamily domain containing 2B, [Score=207, Expect=1e-59]} {Smed: dd_Smed_v6_11210_0_1, dd_Smed_v6_11210_0_1, [Score=275, Expect=7e-85]} {RNA1509_40466, RNA1509_50442, RNA1509_52714, RNA1509_57830} {RNA1310_2075.2, RNA1509_40466, RNA1509_50442, RNA1509_52714, RNA1509_57830} {RNA1509_40466, RNA1509_50442, RNA1509_52714, RNA1509_57830, RNA815_16022} |
| 7. | MligTC455_39871 | 1444 | 30.09 | Mlig455_029714, Mlig455_034857 | Neo: - Age: - |
STAU2 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_029714 {REF} {Length: 2011} {Pfam: Staufen C-terminal domain [PF16482.7, score=27.1]; Double-stranded RNA binding motif [PF00035.28, score=19.5]} {RNA1509_53015} {RNA1310_4047.1} {RNA815_17208.1} Mlig455_034857 {REF} {Length: 3387} {TRANSSPLICED} {Pfam: Double-stranded RNA binding motif [PF00035.28, score=122.6]; Staufen C-terminal domain [PF16482.7, score=44.8]; double strand RNA binding domain from DEAD END PROTEIN 1 [PF14709.9, score=27.2]} {Human: ENSG00000040341, STAU2, staufen double-stranded RNA binding protein 2, [RH, Score=199, Expect=2e-54]} {Mouse: ENSMUSG00000025920, Stau2, staufen double-stranded RNA binding protein 2, [RH, Score=194, Expect=3e-53]} {Dmel: FBgn0003520, stau, staufen, [RH, Score=102, Expect=7e-22]} {Celegans: WBGene00018857, stau-1, STAUfen (DsRNA binding protein) homolog, [RH, Score=148, Expect=9e-37]} {RNA1509_18826, RNA1509_38637, RNA1509_42637, RNA1509_53015, RNA1509_55172, RNA1509_58024} {RNA1310_4047.1, RNA1509_18826, RNA1509_38637, RNA1509_42637, RNA1509_53015, RNA1509_55172, RNA1509_58024} {RNA1509_18826, RNA1509_38637, RNA1509_42637, RNA1509_53015, RNA1509_55172, RNA1509_58024, RNA815_4500} |
| 8. | MligTC455_41456 | 343 | 7.14 | Mlig455_024247 | Neo: - Age: logFC(26M/2M)=0.411 |
0.952 | - | - | - | - | - | 0.952 | Mlig455_024247 {REF} {Length: 2044} {NoTransDecoderORF} {RNA1509_31967} {RNA1310_45510} {RNA815_32579.1} |