Data search
Results for MligTC455_42196
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42196 | 168 | 3.49 | Mlig455_011715 | Neo: Irradiation Age: Down-Up-Down Region-enriched R5: 3.320/0.00173 |
Mlig455_011715 {REF} {Length: 2400} {TRANSSPLICED} {RNA1509_24615, RNA1509_33212} {RNA1310_9077.2, RNA1509_24615, RNA1509_33212} {RNA1509_24615, RNA1509_33212, RNA815_11156} |
Cumulative graph for MligTC455_42196
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.184 | 2.608 | 0.99967 | 1.00000 | |
| RegionR2 | 1.373 | 2.608 | 0.31109 | 0.70194 | |
| RegionR3 | 1.561 | 2.608 | 0.19101 | 0.72813 | |
| RegionR4 | 0.939 | 2.608 | 0.41821 | 0.74608 | |
| RegionR5 | 3.32 | 2.608 | 0.00010 | 0.00173 | |
| RegionR6 | 2.271 | 2.608 | 0.03863 | 0.36886 | |
| RegionR7 | 0.113 | 2.608 | 0.75612 | 1.00000 | |
| RegionR8 | -4.393 | 2.608 | 0.99955 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.006 | 2.608 | 0.99998 | 1.00000 | |
| RegenerationR2 | 0.133 | 2.608 | 0.85829 | 1.00000 | |
| RegenerationR3 | 1.007 | 2.608 | 0.21526 | 0.65216 | |
| RegenerationR4 | 1.227 | 2.608 | 0.15009 | 0.57803 | |
| RegenerationR5 | 0.208 | 2.608 | 0.75204 | 0.97242 | |
| RegenerationR6 | 0.407 | 2.608 | 0.61143 | 0.87495 | |
| RegenerationBL | 2.572 | 2.608 | 0.07667 | 0.32326 | |
| RegenerationTP | 3.657 | 2.608 | 0.05100 | 0.37011 |
Genes with expression patterns similar to MligTC455_42196
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42196 | 168 | 3.49 | Mlig455_011715 | Neo: Irradiation Age: Down-Up-Down Region-enriched R5: 3.320/0.00173 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_011715 {REF} {Length: 2400} {TRANSSPLICED} {RNA1509_24615, RNA1509_33212} {RNA1310_9077.2, RNA1509_24615, RNA1509_33212} {RNA1509_24615, RNA1509_33212, RNA815_11156} | |
| 2. | MligTC455_48565 | 369 | 7.69 | Mlig455_050968 | Neo: - Age: - Region-specific R5: 2.171 Region-enriched R5: 1.645/0.00001 |
3.291 | 0.861 | - | 0.738 | - | 0.711 | 0.981 | Mlig455_050968 {REF} {Length: 472} {NoTransDecoderORF} {RNA1509_25992} {RNA1310_89415.2, RNA1509_25992} {RNA1509_25992, RNA815_55479} | |
| 3. | MligTC455_23354 | 985 | 20.51 | Mlig455_043725, Mlig455_043812 | Neo: - Age: - |
GEMIN5 | 2.655 | 0.816 | - | - | 0.886 | - | 0.953 | Mlig455_043725 {REF} {Length: 4629} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=53.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=34.1]} {Human: ENSG00000082516, GEMIN5, gem nuclear organelle associated protein 5, [RH, Score=263, Expect=6e-71]} {Mouse: ENSMUSG00000037275, Gemin5, gem nuclear organelle associated protein 5, [Score=271, Expect=9e-74]} {Dmel: FBgn0033526, Caf1-105, Chromatin assembly factor 1, p105 subunit, [Score=62.0, Expect=4e-09]} {Celegans: WBGene00021074, W07E6.2, [Score=58.5, Expect=6e-10]} {Smed: dd_Smed_v6_3438_0_1, dd_Smed_v6_3438_0_1, [Score=56.6, Expect=6e-08]} {RNA1509_10687} {RNA1310_1434.2} {RNA815_13032} Mlig455_043812 {REF} {Length: 4661} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=56.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=34.0]} {Human: ENSG00000082516, GEMIN5, gem nuclear organelle associated protein 5, [RH, Score=281, Expect=1e-76]} {Mouse: ENSMUSG00000037275, Gemin5, gem nuclear organelle associated protein 5, [Score=289, Expect=3e-79]} {Dmel: FBgn0033526, Caf1-105, Chromatin assembly factor 1, p105 subunit, [Score=60.8, Expect=7e-09]} {Celegans: WBGene00021074, W07E6.2, [Score=58.2, Expect=9e-10]} {Smed: dd_Smed_v6_3438_0_1, dd_Smed_v6_3438_0_1, [Score=58.5, Expect=2e-08]} {RNA1509_10687, RNA1509_30279} {RNA1310_1434.2, RNA1509_30279} {RNA1509_30279, RNA815_13032} |
| 4. | MligTC455_24403 | 293 | 6.11 | Mlig455_002756 | Neo: Irradiation Age: - |
ATAD2B | 2.619 | 0.805 | - | 0.848 | - | - | 0.966 | Mlig455_002756 {REF} {Length: 5381} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=147.5]; Bromodomain [PF00439.27, score=48.1]; AAA+ lid domain [PF17862.3, score=36.2]; AAA domain (Cdc48 subfamily) [PF07724.16, score=22.9]; AAA ATPase domain [PF13191.8, score=22.0]} {Human: ENSG00000119778, ATAD2B, ATPase family, AAA domain containing 2B, [RH, Score=694, Expect=0.0]} {Mouse: ENSMUSG00000052812, Atad2b, ATPase family, AAA domain containing 2B, [RH, Score=668, Expect=0.0]; ENSMUSG00000116053, Atad2, ATPase family, AAA domain containing 2, [RH, Score=652, Expect=0.0]; ENSMUSG00000022360, Atad2, ATPase family, AAA domain containing 2, [RH, Score=652, Expect=0.0]} {Dmel: FBgn0261014, TER94, [Score=230, Expect=2e-62]} {Celegans: WBGene00008682, lex-1, Tat-binding homolog 7, [RH, Score=513, Expect=5e-160]} {Smed: dd_Smed_v6_8534_0_1, dd_Smed_v6_8534_0_1, [RH, Score=522, Expect=1e-164]} {RNA1509_47976} {RNA1310_2482.1} {RNA815_17171} |
| 5. | MligTC455_29472 | 289 | 6.03 | Mlig455_028565 | Neo: Int S/G2/M Age: - |
2.504 | 0.954 | - | 0.712 | - | - | 0.838 | Mlig455_028565 {REF} {Length: 3475} {RNA1509_15781} {RNA1310_3922} {RNA815_5825} | |
| 6. | MligTC455_44587 | 243 | 5.07 | Mlig455_013336 | Neo: - Age: - Regeneration-upregulated R3: 2.427 Regeneration-enriched R3: 2.427 |
ILF2 | 0.982 | - | - | - | - | - | 0.982 | Mlig455_013336 {REF} {Length: 1894} {Pfam: DZF domain [PF07528.16, score=282.6]} {Human: ENSG00000143621, ILF2, interleukin enhancer binding factor 2, [RH, Score=400, Expect=8e-138]} {Mouse: ENSMUSG00000001016, Ilf2, interleukin enhancer binding factor 2, [RH, Score=400, Expect=5e-138]} {Dmel: FBgn0038046, CG5641, [RH, Score=387, Expect=1e-132]} {Celegans: WBGene00011253, R11H6.5, [RH, Score=156, Expect=2e-43]} {Smed: dd_Smed_v6_3548_0_1, dd_Smed_v6_3548_0_1, [RH, Score=401, Expect=2e-138]} {RNA1509_14247} {RNA1310_13620.1} {RNA815_6092} |
| 7. | MligTC455_44615 | 349 | 7.28 | Mlig455_013647 | Neo: - Age: - Region-enriched R5: 1.203/0.00879 |
ERG28 | 0.968 | - | - | - | - | - | 0.968 | Mlig455_013647 {REF} {Length: 2311} {TRANSSPLICED} {Pfam: Erg28 like protein [PF03694.15, score=81.5]} {Human: ENSG00000133935, ERG28, ergosterol biosynthesis 28 homolog, [RH, Score=78.6, Expect=1e-18]} {Mouse: ENSMUSG00000021252, Erg28, ergosterol biosynthesis 28, [RH, Score=77.8, Expect=2e-18]} {RNA1509_32376} {RNA1310_30496, RNA1509_32376} {RNA1509_32376, RNA815_19683} |
| 8. | MligTC455_48930 | 897 | 18.69 | Mlig455_062351, Mlig455_062364, Mlig455_062383 | Neo: - Age: logFC(26M/2M)=-0.487 Regeneration-enriched BL: 1.778 |
SNRPB2 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_062351 {REF} {Length: 3624} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=74.4]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=37.4]} {Human: ENSG00000125870, SNRPB2, small nuclear ribonucleoprotein polypeptide B2, [Score=200, Expect=4e-64]; ENSG00000077312, SNRPA, small nuclear ribonucleoprotein polypeptide A, [Score=191, Expect=9e-60]} {Mouse: ENSMUSG00000008333, Snrpb2, U2 small nuclear ribonucleoprotein B, [Score=203, Expect=1e-65]} {Dmel: FBgn0003449, snf, sans fille, [Score=174, Expect=2e-54]} {Celegans: WBGene00004386, rnp-3, RNP (RRM RNA binding domain) containing, [Score=164, Expect=1e-50]} {Smed: dd_Smed_v6_2444_0_1, dd_Smed_v6_2444_0_1, [Score=196, Expect=6e-63]} {RNA1509_22935, RNA1509_25711} {RNA1310_2913, RNA1509_25711} {RNA1509_25711, RNA815_7310} Mlig455_062364 {REF} {Length: 2011} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=74.4]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=37.4]} {Human: ENSG00000125870, SNRPB2, small nuclear ribonucleoprotein polypeptide B2, [Score=200, Expect=4e-64]; ENSG00000077312, SNRPA, small nuclear ribonucleoprotein polypeptide A, [Score=191, Expect=9e-60]} {Mouse: ENSMUSG00000008333, Snrpb2, U2 small nuclear ribonucleoprotein B, [Score=203, Expect=1e-65]} {Dmel: FBgn0003449, snf, sans fille, [Score=174, Expect=2e-54]} {Celegans: WBGene00004386, rnp-3, RNP (RRM RNA binding domain) containing, [Score=164, Expect=1e-50]} {Smed: dd_Smed_v6_2444_0_1, dd_Smed_v6_2444_0_1, [Score=196, Expect=6e-63]} {RNA1509_22935} {RNA1310_2913} {RNA815_7310} Mlig455_062383 {REF} {Length: 2026} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=74.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=37.5]} {Human: ENSG00000125870, SNRPB2, small nuclear ribonucleoprotein polypeptide B2, [Score=202, Expect=5e-65]; ENSG00000077312, SNRPA, small nuclear ribonucleoprotein polypeptide A, [Score=192, Expect=5e-60]} {Mouse: ENSMUSG00000008333, Snrpb2, U2 small nuclear ribonucleoprotein B, [Score=206, Expect=1e-66]} {Dmel: FBgn0003449, snf, sans fille, [Score=175, Expect=9e-55]} {Celegans: WBGene00004386, rnp-3, RNP (RRM RNA binding domain) containing, [Score=164, Expect=1e-50]} {Smed: dd_Smed_v6_2444_0_1, dd_Smed_v6_2444_0_1, [Score=199, Expect=6e-64]} {RNA1509_22935, RNA1509_35461} {RNA1310_2913, RNA1509_35461} {RNA1509_35461, RNA815_7310} |
| 9. | MligTC455_33938 | 921 | 19.18 | Mlig455_043743, Mlig455_047482 | Neo: - Age: - |
HNRNPH2, TBC1D24 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_043743 {REF} {Length: 3480} {Pfam: TLD [PF07534.18, score=56.4]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=35.8]} {Human: ENSG00000162065, TBC1D24, TBC1 domain family member 24, [Score=102, Expect=8e-22]} {Mouse: ENSMUSG00000036473, Tbc1d24, TBC1 domain family, member 24, [Score=99.4, Expect=4e-21]} {Dmel: FBgn0032901, sky, skywalker, [Score=111, Expect=4e-25]} {Celegans: WBGene00016292, tbc-7, TBC (Tre-2/Bub2/Cdc16) domain family, [RH, Score=92.0, Expect=6e-19]} {Smed: dd_Smed_v6_5542_0_1, dd_Smed_v6_5542_0_1, [Score=109, Expect=5e-25]} {RNA1509_8289} {RNA1310_8633.1} {RNA815_10795} Mlig455_047482 {REF} {Length: 4001} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=84.0]; TLD [PF07534.18, score=56.1]} {Human: ENSG00000126945, HNRNPH2, heterogeneous nuclear ribonucleoprotein H2, [Score=133, Expect=2e-32]; ENSG00000169045, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [Score=130, Expect=7e-34]; ENSG00000284254, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [Score=130, Expect=1e-31]; ENSG00000169813, HNRNPF, heterogeneous nuclear ribonucleoprotein F, [Score=129, Expect=3e-31]} {Mouse: ENSMUSG00000045427, Hnrnph2, heterogeneous nuclear ribonucleoprotein H2, [Score=133, Expect=2e-32]; ENSMUSG00000042079, Hnrnpf, heterogeneous nuclear ribonucleoprotein F, [Score=131, Expect=3e-32]; ENSMUSG00000007850, Hnrnph1, heterogeneous nuclear ribonucleoprotein H1, [Score=130, Expect=1e-31]} {Dmel: FBgn0259139, glo, glorund, [Score=122, Expect=2e-28]} {Celegans: WBGene00006367, sym-2, RNA-binding protein sym-2, [Score=114, Expect=3e-27]} {Smed: dd_Smed_v6_2383_0_7, dd_Smed_v6_2383_0_7, [Score=116, Expect=4e-29]} {RNA1509_5104} {RNA1310_8633.1} {RNA815_10795} |
| 10. | MligTC455_52418 | 120 | 2.49 | Mlig455_050438 | Neo: - Age: Up-Down-Down |
0.957 | - | - | - | - | - | 0.957 | Mlig455_050438 {REF} {Length: 2535} {RNA1310_42173} {RNA815_14655} | |
| 11. | MligTC455_45454 | 299 | 6.24 | Mlig455_028626 | Neo: Int S/G2/M Age: Down-Up-Up |
BOP1 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_028626 {REF} {Length: 3544} {TRANSSPLICED} {Pfam: BOP1NT (NUC169) domain [PF08145.14, score=319.1]; WD domain, G-beta repeat [PF00400.34, score=49.4]} {Human: ENSG00000285301, BOP1, block of proliferation 1, [RH, Score=476, Expect=4e-158]; ENSG00000261236, BOP1, block of proliferation 1, [RH, Score=476, Expect=4e-158]} {Mouse: ENSMUSG00000022557, Bop1, block of proliferation 1, [RH, Score=465, Expect=2e-154]} {Dmel: FBgn0028744, CG5033, [RH, Score=468, Expect=3e-155]} {Celegans: WBGene00012978, Y48B6A.1, Ribosome biogenesis protein BOP1 homolog, [RH, Score=441, Expect=3e-146]} {Smed: dd_Smed_v6_11041_0_1, dd_Smed_v6_11041_0_1, [RH, Score=309, Expect=4e-95]} {RNA1509_7833} {RNA1310_11209.2} {RNA815_3705} |
| 12. | MligTC455_19865 | 413 | 8.61 | Mlig455_055866 | Neo: Irradiation Age: Down-Up-Down |
0.954 | - | - | - | - | - | 0.954 | Mlig455_055866 {REF} {Length: 1701} {TRANSSPLICED} {Pfam: M-phase-specific PLK1-interacting protein [PF15502.8, score=30.4]} {RNA1509_10545, RNA1509_25963} {RNA1310_33995, RNA1509_10545, RNA1509_25963} {RNA1509_10545, RNA1509_25963, RNA815_824} | |
| 13. | MligTC455_40925 | 203 | 4.22 | Mlig455_015022, Mlig455_038428, Mlig455_038634 | Neo: - Age: - |
LHFPL6 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_015022 {REF} {Length: 3308} {Pfam: Lipoma HMGIC fusion partner-like protein [PF10242.11, score=86.9]} {Human: ENSG00000183722, LHFPL6, LHFPL tetraspan subfamily member 6, [Score=63.5, Expect=3e-11]} {Smed: dd_Smed_v6_6182_0_1, dd_Smed_v6_6182_0_1, [RH, Score=190, Expect=2e-58]} {RNA1310_26278} {RNA815_35631} Mlig455_038428 {REF} {Length: 2384} {Pfam: Lipoma HMGIC fusion partner-like protein [PF10242.11, score=86.9]} {Human: ENSG00000183722, LHFPL6, LHFPL tetraspan subfamily member 6, [Score=63.5, Expect=3e-11]} {Smed: dd_Smed_v6_6182_0_1, dd_Smed_v6_6182_0_1, [RH, Score=190, Expect=2e-58]} {RNA1310_26278} {RNA815_35631} Mlig455_038634 {REF} {Length: 2810} {Pfam: Lipoma HMGIC fusion partner-like protein [PF10242.11, score=86.9]} {Human: ENSG00000183722, LHFPL6, LHFPL tetraspan subfamily member 6, [Score=63.5, Expect=3e-11]} {Smed: dd_Smed_v6_6182_0_1, dd_Smed_v6_6182_0_1, [RH, Score=191, Expect=1e-58]} {RNA1310_26278} {RNA815_35631} |