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Results for MligTC455_42752

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_42752 212 4.42 Mlig455_016044

Neo: -

Age: -

 DUS4L Mlig455_016044 {REF} {Length: 3549} {Pfam: Dihydrouridine synthase (Dus) [PF01207.19, score=207.7]} {Human: ENSG00000105865, DUS4L, dihydrouridine synthase 4 like, [RH, Score=277, Expect=9e-92]; ENSG00000284103, DUS4L, dihydrouridine synthase 4 like, [RH, Score=277, Expect=9e-92]} {Mouse: ENSMUSG00000020648, Dus4l, dihydrouridine synthase 4-like (S. cerevisiae), [RH, Score=275, Expect=1e-90]} {Dmel: FBgn0032750, CG10495, [RH, Score=238, Expect=9e-76]} {Celegans: WBGene00016674, C45G9.2, Uncharacterized tRNA-dihydrouridine synthase-like protein C45G9.2, [RH, Score=213, Expect=2e-67]} {Smed: dd_Smed_v6_9471_0_1, dd_Smed_v6_9471_0_1, [RH, Score=281, Expect=9e-94]} {RNA1509_37119} {RNA1310_18470.1, RNA1509_37119} {RNA1509_37119, RNA815_611.1}

Cumulative graph for MligTC455_42752

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.712 2.606 0.35574 0.99880
RegionR2 1.456 2.606 0.08709 0.36275
RegionR3 0.666 2.606 0.28202 0.82544
RegionR4 -0.564 2.606 0.45573 0.78401
RegionR5 0.677 2.606 0.22594 0.53043
RegionR6 0.208 2.606 0.76286 1.00000
RegionR7 -0.35 2.606 0.69933 1.00000
RegionR8 -0.381 2.606 0.73785 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -3.122 2.606 0.62421 1.00000
RegenerationR2 0.022 2.606 0.97082 1.00000
RegenerationR3 0.128 2.606 0.86874 1.00000
RegenerationR4 0.084 2.606 0.91309 1.00000
RegenerationR5 0.729 2.606 0.25814 0.68952
RegenerationR6 0.966 2.606 0.23618 0.58364
RegenerationBL 1.47 2.606 0.13415 0.43620
RegenerationTP 0.841 2.606 0.47192 0.88215


Genes with expression patterns similar to MligTC455_42752

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_42752 212 4.42 Mlig455_016044

Neo: -

Age: -

 DUS4L 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_016044 {REF} {Length: 3549} {Pfam: Dihydrouridine synthase (Dus) [PF01207.19, score=207.7]} {Human: ENSG00000105865, DUS4L, dihydrouridine synthase 4 like, [RH, Score=277, Expect=9e-92]; ENSG00000284103, DUS4L, dihydrouridine synthase 4 like, [RH, Score=277, Expect=9e-92]} {Mouse: ENSMUSG00000020648, Dus4l, dihydrouridine synthase 4-like (S. cerevisiae), [RH, Score=275, Expect=1e-90]} {Dmel: FBgn0032750, CG10495, [RH, Score=238, Expect=9e-76]} {Celegans: WBGene00016674, C45G9.2, Uncharacterized tRNA-dihydrouridine synthase-like protein C45G9.2, [RH, Score=213, Expect=2e-67]} {Smed: dd_Smed_v6_9471_0_1, dd_Smed_v6_9471_0_1, [RH, Score=281, Expect=9e-94]} {RNA1509_37119} {RNA1310_18470.1, RNA1509_37119} {RNA1509_37119, RNA815_611.1}
2. MligTC455_29363 1618 33.7 Mlig455_025583, Mlig455_060624

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.521

Regeneration-upregulated R6: 1.633

Regeneration-enriched R6: 1.633

 HCCS 2.399 - - 0.747 - 0.952 0.700

Mlig455_025583 {REF} {Length: 1669} {TRANSSPLICED} {Pfam: Cytochrome c/c1 heme lyase [PF01265.19, score=230.3]} {Human: ENSG00000004961, HCCS, holocytochrome c synthase, [RH, Score=256, Expect=7e-85]} {Mouse: ENSMUSG00000031352, Hccs, holocytochrome c synthetase, [RH, Score=266, Expect=7e-89]} {Dmel: FBgn0038925, Cchl, Cytochrome c heme lyase, [RH, Score=297, Expect=4e-101]} {Celegans: WBGene00011527, cchl-1, Probable cytochrome c-type heme lyase, [RH, Score=233, Expect=3e-76]} {Smed: dd_Smed_v6_2573_0_1, dd_Smed_v6_2573_0_1, [RH, Score=269, Expect=2e-90]} {RNA1509_4296} {RNA1310_16872} {RNA815_7646.1}

Mlig455_060624 {REF} {Length: 1659} {TRANSSPLICED} {Pfam: Cytochrome c/c1 heme lyase [PF01265.19, score=230.3]} {Human: ENSG00000004961, HCCS, holocytochrome c synthase, [RH, Score=256, Expect=7e-85]} {Mouse: ENSMUSG00000031352, Hccs, holocytochrome c synthetase, [RH, Score=266, Expect=7e-89]} {Dmel: FBgn0038925, Cchl, Cytochrome c heme lyase, [RH, Score=297, Expect=4e-101]} {Celegans: WBGene00011527, cchl-1, Probable cytochrome c-type heme lyase, [RH, Score=233, Expect=3e-76]} {Smed: dd_Smed_v6_2573_0_1, dd_Smed_v6_2573_0_1, [RH, Score=269, Expect=2e-90]} {RNA1509_17106, RNA1509_37169, RNA1509_4296} {RNA1310_16872, RNA1509_17106, RNA1509_37169} {RNA1509_17106, RNA1509_37169, RNA815_7646.1}
3. MligTC455_40029 127 2.64 Mlig455_000944

Neo: -

Age: -

 MAP3K9 1.758 - - 0.974 - - 0.784 Mlig455_000944 {REF} {Length: 5547} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=143.4]; Protein kinase domain [PF00069.27, score=122.4]; Variant SH3 domain [PF14604.8, score=20.5]; SH3 domain [PF00018.30, score=19.2]} {Human: ENSG00000006432, MAP3K9, mitogen-activated protein kinase kinase kinase 9, [RH, Score=282, Expect=2e-78]} {Mouse: ENSMUSG00000042724, Map3k9, mitogen-activated protein kinase kinase kinase 9, [RH, Score=284, Expect=2e-79]} {Dmel: FBgn0030018, slpr, slipper, [RH, Score=242, Expect=3e-65]} {Celegans: WBGene00003374, mlk-1, Mitogen-activated protein kinase kinase kinase mlk-1, [RH, Score=140, Expect=2e-33]} {Smed: dd_Smed_v6_8838_0_1, dd_Smed_v6_8838_0_1, [Score=136, Expect=2e-32]} {RNA1509_21185} {RNA1310_3788.2} {RNA815_27222}
4. MligTC455_34359 93 1.94 Mlig455_011726

Neo: -

Age: -

 1.738 - - 0.788 0.950 - - Mlig455_011726 {REF} {Length: 2878} {TRANSSPLICED} {Pfam: CUB domain [PF00431.22, score=27.1]} {RNA1509_23090} {RNA1310_8182} {RNA815_1199.1}
5. MligTC455_21911 1207 25.15 Mlig455_003039, Mlig455_003244, Mlig455_003332, Mlig455_006723

Neo: -

Age: -

 1.688 - - - 0.952 - 0.736

Mlig455_003039 {REF} {Length: 5928} {TRANSSPLICED} {RNA1509_2395} {RNA1310_756} {RNA815_226}

Mlig455_003244 {REF} {Length: 6672} {TRANSSPLICED} {RNA1509_16128, RNA1509_2395} {RNA1310_756, RNA1509_16128, RNA1509_2395} {RNA1509_16128, RNA1509_2395, RNA815_226}

Mlig455_003332 {REF} {Length: 6599} {TRANSSPLICED} {RNA1509_2395} {RNA1310_756} {RNA815_226}

Mlig455_006723 {REF} {Length: 463} {NoTransDecoderORF}
6. MligTC455_51170 1331 27.74 Mlig455_029305, Mlig455_029328

Neo: Int S/G2/M

Age: -

 FAM98A 1.685 - - - - 0.729 0.956

Mlig455_029305 {REF} {Length: 2999} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF2465) [PF10239.11, score=263.2]} {Human: ENSG00000119812, FAM98A, family with sequence similarity 98 member A, [RH, Score=174, Expect=3e-48]} {Mouse: ENSMUSG00000002017, Fam98a, family with sequence similarity 98, member A, [RH, Score=171, Expect=2e-47]} {Smed: dd_Smed_v6_5345_0_1, dd_Smed_v6_5345_0_1, [RH, Score=184, Expect=7e-53]} {RNA1509_14032, RNA1509_15449} {RNA1310_20527, RNA1509_15449} {RNA1509_15449, RNA815_42317}

Mlig455_029328 {REF} {Length: 2925} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF2465) [PF10239.11, score=261.9]} {Human: ENSG00000119812, FAM98A, family with sequence similarity 98 member A, [Score=174, Expect=5e-48]} {Mouse: ENSMUSG00000002017, Fam98a, family with sequence similarity 98, member A, [RH, Score=173, Expect=5e-48]} {Smed: dd_Smed_v6_5345_0_1, dd_Smed_v6_5345_0_1, [RH, Score=184, Expect=5e-53]} {RNA1509_14032, RNA1509_35497} {RNA1310_20527, RNA1509_14032, RNA1509_35497} {RNA1509_14032, RNA1509_35497, RNA815_42317}
7. MligTC455_40465 165 3.45 Mlig455_012477

Neo: Irradiation

Age: -

 INTS6 1.651 - - 0.950 - 0.701 - Mlig455_012477 {REF} {Length: 4658} {TRANSSPLICED} {Pfam: von Willebrand factor type A domain [PF13519.8, score=61.6]} {Human: ENSG00000102786, INTS6, integrator complex subunit 6, [RH, Score=599, Expect=0.0]; ENSG00000165359, INTS6L, integrator complex subunit 6 like, [RH, Score=586, Expect=0.0]} {Mouse: ENSMUSG00000035161, Ints6, integrator complex subunit 6, [RH, Score=598, Expect=0.0]} {Dmel: FBgn0261383, IntS6, Integrator 6, [RH, Score=457, Expect=7e-143]} {Celegans: WBGene00000994, dic-1, DICE1 (Deleted In Cancer) homolog, [RH, Score=215, Expect=4e-58]} {Smed: dd_Smed_v6_11019_0_1, dd_Smed_v6_11019_0_1, [RH, Score=476, Expect=3e-155]} {RNA1509_16366} {RNA1310_4525} {RNA815_19797}
8. MligTC455_07309 57 1.19 Mlig455_059977

Neo: -

Age: -

 0.965 - - - 0.965 - - Mlig455_059977 {REF} {Length: 378} {RNA1310_21321} {RNA815_8534}
9. MligTC455_25069 145 3.01 Mlig455_003062

Neo: -

Age: Up-Down-Down

 DDX11 0.963 - - - - 0.963 - Mlig455_003062 {REF} {Length: 3996} {Pfam: Helicase C-terminal domain [PF13307.8, score=176.5]; DEAD_2 [PF06733.17, score=134.1]; Type III restriction enzyme, res subunit [PF04851.17, score=20.5]} {Human: ENSG00000013573, DDX11, DEAD/H-box helicase 11, [Score=305, Expect=3e-88]} {Mouse: ENSMUSG00000035842, Ddx11, DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11, [Score=312, Expect=8e-91]} {Dmel: FBgn0026876, CG11403, [RH, Score=253, Expect=3e-70]} {Celegans: WBGene00010839, chl-1, ATP-dependent DNA helicase chl-1, [Score=241, Expect=2e-66]} {Smed: dd_Smed_v6_19858_0_1, dd_Smed_v6_19858_0_1, [RH, Score=231, Expect=2e-64]} {RNA1509_47246} {RNA1310_4495} {RNA815_4148}
10. MligTC455_40997 96 2 Mlig455_001296

Neo: -

Age: -

 0.957 - - - 0.957 - - Mlig455_001296 {REF} {Length: 2152} {Smed: dd_Smed_v6_29877_0_1, dd_Smed_v6_29877_0_1, [Score=89.0, Expect=3e-19]} {RNA1310_30591} {RNA815_40353}
11. MligTC455_40565 18 0.37 Mlig455_024121

Neo: -

Age: -

Region-enriched R5: 2.986/0.01190

 0.952 - - - 0.952 - - Mlig455_024121 {REF} {Length: 2974} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=49.1]} {Dmel: FBgn0036749, CG7460, [Score=62.0, Expect=9e-10]} {RNA1509_44166} {RNA1310_52978} {RNA815_38183}
12. MligTC455_46392 8862 184.62 Mlig455_048871

Neo: -

Age: Down-Up-Up

Regeneration-depleted BL: -1.280
Regeneration-depleted R6: -1.097

 CNN3 0.952 - - - 0.952 - - Mlig455_048871 {REF} {Length: 1248} {Pfam: Calponin homology (CH) domain [PF00307.33, score=81.5]; Calponin family repeat [PF00402.20, score=42.8]} {Human: ENSG00000117519, CNN3, calponin 3, [Score=134, Expect=6e-38]; ENSG00000144834, TAGLN3, transgelin 3, [Score=134, Expect=3e-39]; ENSG00000158710, TAGLN2, transgelin 2, [Score=132, Expect=2e-38]; ENSG00000064666, CNN2, calponin 2, [Score=130, Expect=1e-36]} {Mouse: ENSMUSG00000053931, Cnn3, calponin 3, acidic, [Score=134, Expect=5e-38]; ENSMUSG00000022658, Tagln3, transgelin 3, [Score=134, Expect=2e-39]; ENSMUSG00000004665, Cnn2, calponin 2, [Score=132, Expect=1e-37]; ENSMUSG00000026547, Tagln2, transgelin 2, [Score=131, Expect=2e-38]; ENSMUSG00000001349, Cnn1, calponin 1, [Score=128, Expect=9e-37]} {Dmel: FBgn0002789, Mp20, Muscle protein 20, [RH, Score=201, Expect=4e-66]} {Celegans: WBGene00000777, cpn-1, CPN-1; CalPoNin, [Score=127, Expect=5e-37]} {Smed: dd_Smed_v6_1512_0_1, dd_Smed_v6_1512_0_1, [RH, Score=284, Expect=5e-99]} {RNA1509_555} {RNA1310_32900.2} {RNA815_14879}
13. MligTC455_13555 95 1.97 Mlig455_019079

Neo: Int S/G2/M

Age: -

 COA7 0.951 - - - - 0.951 - Mlig455_019079 {REF} {Length: 1418} {Pfam: Sel1 repeat [PF08238.14, score=23.3]} {Human: ENSG00000162377, COA7, cytochrome c oxidase assembly factor 7 (putative), [Score=48.9, Expect=2e-06]} {Mouse: ENSMUSG00000048351, Coa7, cytochrome c oxidase assembly factor 7, [Score=46.6, Expect=1e-05]} {Dmel: FBgn0039965, CG13865, [RH, Score=66.2, Expect=2e-12]} {RNA1509_45906} {RNA1310_37650.1} {RNA815_47606}
14. MligTC455_48222 885 18.44 Mlig455_031424, Mlig455_056469

Neo: -

Age: Down-Up-Up

 GFER 0.951 - - - - 0.951 -

Mlig455_031424 {REF} {Length: 1606} {TRANSSPLICED} {Pfam: Erv1 / Alr family [PF04777.15, score=104.4]} {Human: ENSG00000127554, GFER, growth factor, augmenter of liver regeneration, [RH, Score=147, Expect=2e-44]} {Mouse: ENSMUSG00000040888, Gfer, growth factor, augmenter of liver regeneration, [RH, Score=139, Expect=2e-41]} {Dmel: FBgn0031068, Alr, Augmenter of liver regeneration, [RH, Score=134, Expect=6e-39]} {Celegans: WBGene00018955, F56C11.3, Sulfhydryl oxidase, [RH, Score=140, Expect=1e-42]} {Smed: dd_Smed_v6_9440_0_1, dd_Smed_v6_9440_0_1, [RH, Score=160, Expect=8e-51]} {RNA1509_41230} {RNA1310_32417.1} {RNA815_24929}

Mlig455_056469 {REF} {Length: 1066} {TRANSSPLICED} {Pfam: Erv1 / Alr family [PF04777.15, score=104.3]} {Human: ENSG00000127554, GFER, growth factor, augmenter of liver regeneration, [RH, Score=149, Expect=5e-45]} {Mouse: ENSMUSG00000040888, Gfer, growth factor, augmenter of liver regeneration, [RH, Score=139, Expect=2e-41]} {Dmel: FBgn0031068, Alr, Augmenter of liver regeneration, [RH, Score=132, Expect=5e-38]} {Celegans: WBGene00018955, F56C11.3, Sulfhydryl oxidase, [RH, Score=140, Expect=2e-42]} {Smed: dd_Smed_v6_9440_0_1, dd_Smed_v6_9440_0_1, [RH, Score=161, Expect=6e-51]} {RNA1509_19287, RNA1509_41230} {RNA1310_32417.1, RNA1509_19287, RNA1509_41230} {RNA1509_19287, RNA1509_41230, RNA815_24929}

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