Data search


search
Exact
Search

Results for MligTC455_42857

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_42857 1247 25.98 Mlig455_035150

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.348

EIF1AD Mlig455_035150 {REF} {Length: 1056} {TRANSSPLICED} {Pfam: Translation initiation factor 1A / IF-1 [PF01176.21, score=67.2]} {Human: ENSG00000175376, EIF1AD, eukaryotic translation initiation factor 1A domain containing, [RH, Score=129, Expect=7e-39]} {Mouse: ENSMUSG00000024841, Eif1ad, eukaryotic translation initiation factor 1A domain containing, [RH, Score=131, Expect=5e-39]} {Dmel: FBgn0051957, CG31957, [RH, Score=114, Expect=2e-32]} {Celegans: WBGene00014112, ZK856.11, Probable RNA-binding protein EIF1AD, [RH, Score=93.6, Expect=1e-24]} {Smed: dd_Smed_v6_8143_0_1, dd_Smed_v6_8143_0_1, [RH, Score=71.6, Expect=2e-16]} {RNA1509_13682, RNA1509_51171, RNA1509_55967} {RNA1310_36398.1, RNA1509_51171, RNA1509_55967} {RNA1509_51171, RNA1509_55967, RNA815_37405}

Cumulative graph for MligTC455_42857

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.227 4.868 0.04388 0.50538
RegionR2 -0.303 4.868 0.35762 0.75207
RegionR3 -0.437 4.868 0.12196 0.60326
RegionR4 0.175 4.868 0.57696 0.89399
RegionR5 0.816 4.868 0.00045 0.00546
RegionR6 0.179 4.868 0.50726 1.00000
RegionR7 -0.5 4.868 0.18435 0.78405
RegionR8 -1.158 4.868 0.02272 0.29360

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.806 4.868 0.32414 1.00000
RegenerationR2 -0.297 4.868 0.32980 0.76737
RegenerationR3 0.099 4.868 0.76507 0.96947
RegenerationR4 0.03 4.868 0.92528 1.00000
RegenerationR5 -0.428 4.868 0.13476 0.54330
RegenerationR6 -0.037 4.868 0.90802 1.00000
RegenerationBL 0.453 4.868 0.25659 0.61365
RegenerationTP 0.424 4.868 0.36524 0.80405


Genes with expression patterns similar to MligTC455_42857

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_42857 1247 25.98 Mlig455_035150

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.348

EIF1AD 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_035150 {REF} {Length: 1056} {TRANSSPLICED} {Pfam: Translation initiation factor 1A / IF-1 [PF01176.21, score=67.2]} {Human: ENSG00000175376, EIF1AD, eukaryotic translation initiation factor 1A domain containing, [RH, Score=129, Expect=7e-39]} {Mouse: ENSMUSG00000024841, Eif1ad, eukaryotic translation initiation factor 1A domain containing, [RH, Score=131, Expect=5e-39]} {Dmel: FBgn0051957, CG31957, [RH, Score=114, Expect=2e-32]} {Celegans: WBGene00014112, ZK856.11, Probable RNA-binding protein EIF1AD, [RH, Score=93.6, Expect=1e-24]} {Smed: dd_Smed_v6_8143_0_1, dd_Smed_v6_8143_0_1, [RH, Score=71.6, Expect=2e-16]} {RNA1509_13682, RNA1509_51171, RNA1509_55967} {RNA1310_36398.1, RNA1509_51171, RNA1509_55967} {RNA1509_51171, RNA1509_55967, RNA815_37405}
2. MligTC455_47208 1083 22.56 Mlig455_034771

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 1.670

Regeneration-enriched BL: 1.670

E2F4 0.968 - - 0.968 - - - Mlig455_034771 {REF} {Length: 2224} {TRANSSPLICED} {Pfam: E2F/DP family winged-helix DNA-binding domain [PF02319.22, score=89.0]; E2F transcription factor CC-MB domain [PF16421.7, score=79.6]} {Human: ENSG00000205250, E2F4, E2F transcription factor 4, [RH, Score=207, Expect=2e-62]} {Mouse: ENSMUSG00000014859, E2f4, E2F transcription factor 4, [RH, Score=206, Expect=4e-62]} {Dmel: FBgn0011766, E2f1, E2F transcription factor 1, [RH, Score=107, Expect=5e-25]} {Celegans: WBGene00001161, efl-1, E2F-like (Mammalian transcription factor); EFL-1, [RH, Score=124, Expect=2e-32]} {Smed: dd_Smed_v6_3130_0_1, dd_Smed_v6_3130_0_1, [RH, Score=110, Expect=3e-28]} {RNA1509_11778, RNA1509_30431, RNA1509_39358} {RNA1310_22021, RNA1509_11778, RNA1509_30431, RNA1509_39358} {RNA1509_11778, RNA1509_30431, RNA1509_39358, RNA815_22661}
3. MligTC455_46303 619 12.9 Mlig455_061082

Neo: -

Age: -

SINHCAF 0.959 - - 0.959 - - - Mlig455_061082 {REF} {Length: 3761} {TRANSSPLICED} {Pfam: Protein Family FAM60A [PF15396.8, score=66.2]} {Human: ENSG00000276371, SINHCAF, SIN3-HDAC complex associated factor, [RH, Score=63.9, Expect=4e-12]; ENSG00000139146, SINHCAF, SIN3-HDAC complex associated factor, [RH, Score=63.9, Expect=4e-12]} {Mouse: ENSMUSG00000039985, Sinhcaf, SIN3-HDAC complex associated factor, [RH, Score=64.7, Expect=3e-12]} {Dmel: FBgn0266000, CG44774, [Score=62.8, Expect=2e-10]} {Smed: dd_Smed_v6_8876_0_1, dd_Smed_v6_8876_0_1, [RH, Score=79.7, Expect=9e-17]} {RNA1509_37144} {RNA1310_15324} {RNA815_17673}
4. MligTC455_46302 615 12.82 Mlig455_035429

Neo: -

Age: -

SINHCAF 0.958 - - 0.958 - - - Mlig455_035429 {REF} {Length: 3769} {TRANSSPLICED} {Pfam: Protein Family FAM60A [PF15396.8, score=66.2]} {Human: ENSG00000276371, SINHCAF, SIN3-HDAC complex associated factor, [RH, Score=63.9, Expect=4e-12]; ENSG00000139146, SINHCAF, SIN3-HDAC complex associated factor, [RH, Score=63.9, Expect=4e-12]} {Mouse: ENSMUSG00000039985, Sinhcaf, SIN3-HDAC complex associated factor, [RH, Score=64.3, Expect=3e-12]} {Dmel: FBgn0266000, CG44774, [Score=62.8, Expect=1e-10]} {Smed: dd_Smed_v6_8876_0_1, dd_Smed_v6_8876_0_1, [RH, Score=79.7, Expect=8e-17]} {RNA1509_37144} {RNA1310_15324} {RNA815_17673}
5. MligTC455_14475 4578 95.38 Mlig455_040090

Neo: -

Age: -

0.955 - - 0.955 - - - Mlig455_040090 {REF} {Length: 1993} {TRANSSPLICED} {Pfam: Tetraspanin family [PF00335.22, score=88.6]} {Mouse: ENSMUSG00000025511, Tspan4, tetraspanin 4, [Score=46.6, Expect=1e-05]} {Dmel: FBgn0036769, Tsp74F, Tetraspanin 74F, [RH, Score=92.4, Expect=9e-22]} {Smed: dd_Smed_v6_1808_0_1, dd_Smed_v6_1808_0_1, [RH, Score=187, Expect=3e-57]} {RNA1509_12533, RNA1509_1365} {RNA1310_13559.1, RNA1509_12533, RNA1509_1365} {RNA1509_12533, RNA1509_1365, RNA815_5097.1}
6. MligTC455_20311 1434 29.87 Mlig455_063521

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.267

FAAH2 0.954 - - 0.954 - - - Mlig455_063521 {REF} {Length: 3855} {Pfam: Amidase [PF01425.23, score=199.3]} {Human: ENSG00000165591, FAAH2, fatty acid amide hydrolase 2, [Score=84.7, Expect=1e-16]} {Mouse: ENSMUSG00000019863, Qrsl1, glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1, [Score=67.8, Expect=1e-11]} {Dmel: FBgn0037547, CG7910, [Score=87.0, Expect=7e-18]} {Celegans: WBGene00013226, faah-5, Fatty Acid Amide Hydrolase homolog, [Score=77.8, Expect=7e-15]} {Smed: dd_Smed_v6_12029_0_1, dd_Smed_v6_12029_0_1, [Score=100, Expect=2e-22]} {RNA1509_1621, RNA1509_9590} {RNA1310_11846.1, RNA1509_1621, RNA1509_9590} {RNA1509_1621, RNA1509_9590, RNA815_4419}
7. MligTC455_51044 1211 25.23 Mlig455_008767, Mlig455_008799

Neo: -

Age: -

OSBPL11 0.95 - - 0.950 - - -

Mlig455_008767 {REF} {Length: 4082} {Pfam: Oxysterol-binding protein [PF01237.20, score=264.7]; PH domain [PF00169.31, score=36.2]; Pleckstrin homology domain [PF15409.8, score=31.3]} {Human: ENSG00000144909, OSBPL11, oxysterol binding protein like 11, [RH, Score=435, Expect=1e-138]; ENSG00000144645, OSBPL10, oxysterol binding protein like 10, [RH, Score=425, Expect=2e-135]} {Mouse: ENSMUSG00000022807, Osbpl11, oxysterol binding protein-like 11, [RH, Score=434, Expect=3e-138]; ENSMUSG00000040875, Osbpl10, oxysterol binding protein-like 10, [RH, Score=425, Expect=8e-137]} {Dmel: FBgn0033463, CG1513, [Score=358, Expect=3e-113]} {Celegans: WBGene00016331, obr-4, Oxysterol-binding protein, [Score=316, Expect=2e-98]} {Smed: dd_Smed_v6_7299_0_1, dd_Smed_v6_7299_0_1, [RH, Score=382, Expect=9e-119]} {RNA1509_10614, RNA1509_25738} {RNA1310_3960.1, RNA1509_25738} {RNA1509_25738, RNA815_2691}

Mlig455_008799 {REF} {Length: 220} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_38576} {RNA1310_3960.1} {RNA815_27097}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA