TomoSeq data search

Data search

Results for MligTC455_14475

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_14475

4578

95.38

Mlig455_040090

Neo: -

Age: -

Mlig455_040090 {REF} {Length: 1993} {TRANSSPLICED} {Pfam: Tetraspanin family [PF00335.22, score=88.6]} {Mouse: ENSMUSG00000025511, Tspan4, tetraspanin 4, [Score=46.6, Expect=1e-05]} {Dmel: FBgn0036769, Tsp74F, Tetraspanin 74F, [RH, Score=92.4, Expect=9e-22]} {Smed: dd_Smed_v6_1808_0_1, dd_Smed_v6_1808_0_1, [RH, Score=187, Expect=3e-57]} {RNA1509_12533, RNA1509_1365} {RNA1310_13559.1, RNA1509_12533, RNA1509_1365} {RNA1509_12533, RNA1509_1365, RNA815_5097.1}

Cumulative graph for MligTC455_14475

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.614	6.658	0.16933	0.79407
RegionR2	-0.514	6.658	0.04154	0.23819
RegionR3	0.462	6.658	0.01926	0.23136
RegionR4	0.192	6.658	0.43486	0.76377
RegionR5	-0.206	6.658	0.29485	0.62816
RegionR6	0.019	6.658	0.92803	1.00000
RegionR7	-0.527	6.658	0.03233	0.34242
RegionR8	-0.039	6.658	0.88321	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.033	6.658	0.95590	1.00000
RegenerationR2	0.236	6.658	0.33825	0.77386
RegenerationR3	-0.51	6.658	0.04714	0.37822
RegenerationR4	0.051	6.658	0.84759	1.00000
RegenerationR5	0.282	6.658	0.26276	0.69431
RegenerationR6	0.071	6.658	0.78432	0.96972
RegenerationBL	0.367	6.658	0.16340	0.48453
RegenerationTP	-0.014	6.658	0.96302	1.00000

Genes with expression patterns similar to MligTC455_14475

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_14475	4578	95.38	Mlig455_040090	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_040090 {REF} {Length: 1993} {TRANSSPLICED} {Pfam: Tetraspanin family [PF00335.22, score=88.6]} {Mouse: ENSMUSG00000025511, Tspan4, tetraspanin 4, [Score=46.6, Expect=1e-05]} {Dmel: FBgn0036769, Tsp74F, Tetraspanin 74F, [RH, Score=92.4, Expect=9e-22]} {Smed: dd_Smed_v6_1808_0_1, dd_Smed_v6_1808_0_1, [RH, Score=187, Expect=3e-57]} {RNA1509_12533, RNA1509_1365} {RNA1310_13559.1, RNA1509_12533, RNA1509_1365} {RNA1509_12533, RNA1509_1365, RNA815_5097.1}
2.	MligTC455_14474	4337	90.35	Mlig455_040064	Neo: - Age: -		5.589	0.995	0.999	0.974	0.747	0.964	0.910	Mlig455_040064 {REF} {Length: 567} {NoTransDecoderORF} {RNA1509_12533} {RNA1310_13559.1} {RNA815_5097.1}
3.	MligTC455_20311	1434	29.87	Mlig455_063521	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.267	FAAH2	0.966	-	-	0.966	-	-	-	Mlig455_063521 {REF} {Length: 3855} {Pfam: Amidase [PF01425.23, score=199.3]} {Human: ENSG00000165591, FAAH2, fatty acid amide hydrolase 2, [Score=84.7, Expect=1e-16]} {Mouse: ENSMUSG00000019863, Qrsl1, glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1, [Score=67.8, Expect=1e-11]} {Dmel: FBgn0037547, CG7910, [Score=87.0, Expect=7e-18]} {Celegans: WBGene00013226, faah-5, Fatty Acid Amide Hydrolase homolog, [Score=77.8, Expect=7e-15]} {Smed: dd_Smed_v6_12029_0_1, dd_Smed_v6_12029_0_1, [Score=100, Expect=2e-22]} {RNA1509_1621, RNA1509_9590} {RNA1310_11846.1, RNA1509_1621, RNA1509_9590} {RNA1509_1621, RNA1509_9590, RNA815_4419}
4.	MligTC455_54056	1132	23.59	Mlig455_007482	Neo: - Age: -	EPB41L3	0.957	-	-	-	-	0.957	-	Mlig455_007482 {REF} {Length: 5099} {TRANSSPLICED} {Pfam: FERM C-terminal PH-like domain [PF09380.12, score=68.2]; FERM central domain [PF00373.20, score=57.6]; FERM N-terminal domain [PF09379.12, score=57.3]; FERM adjacent (FA) [PF08736.13, score=24.3]} {Human: ENSG00000082397, EPB41L3, erythrocyte membrane protein band 4.1 like 3, [RH, Score=345, Expect=3e-104]; ENSG00000079819, EPB41L2, erythrocyte membrane protein band 4.1 like 2, [RH, Score=342, Expect=2e-102]; ENSG00000088367, EPB41L1, erythrocyte membrane protein band 4.1 like 1, [RH, Score=332, Expect=3e-99]} {Mouse: ENSMUSG00000024044, Epb41l3, erythrocyte membrane protein band 4.1 like 3, [RH, Score=348, Expect=2e-105]; ENSMUSG00000019978, Epb41l2, erythrocyte membrane protein band 4.1 like 2, [RH, Score=336, Expect=1e-100]; ENSMUSG00000027624, Epb41l1, erythrocyte membrane protein band 4.1 like 1, [RH, Score=335, Expect=2e-100]} {Dmel: FBgn0010434, cora, coracle, [RH, Score=329, Expect=5e-95]} {Celegans: WBGene00001490, frm-3, FERM domain (Protein4.1-ezrin-radixin-moesin) family, [Score=219, Expect=5e-59]} {Smed: dd_Smed_v6_2825_0_1, dd_Smed_v6_2825_0_1, [RH, Score=468, Expect=2e-151]} {RNA1509_20464, RNA1509_20990, RNA1509_22281, RNA1509_24778, RNA1509_2586} {RNA1310_8874.2, RNA1509_20464, RNA1509_20990, RNA1509_22281, RNA1509_24778} {RNA1509_20464, RNA1509_20990, RNA1509_22281, RNA1509_24778, RNA815_4056}
5.	MligTC455_21932	697	14.52	Mlig455_026222	Neo: Neoblast, stringent Age: logFC(26M/2M)=-0.409 Region-enriched R5: 1.392/0.00315 Regeneration-upregulated BL: 2.638 Regeneration-enriched BL: 2.638	RRM2	0.955	-	-	-	-	0.955	-	Mlig455_026222 {REF} {Length: 4595} {TRANSSPLICED} {Pfam: Ribonucleotide reductase, small chain [PF00268.23, score=381.7]} {Human: ENSG00000171848, RRM2, ribonucleotide reductase regulatory subunit M2, [RH, Score=528, Expect=0.0]; ENSG00000048392, RRM2B, ribonucleotide reductase regulatory TP53 inducible subunit M2B, [RH, Score=510, Expect=0.0]} {Mouse: ENSMUSG00000020649, Rrm2, ribonucleotide reductase M2, [RH, Score=529, Expect=0.0]; ENSMUSG00000022292, Rrm2b, ribonucleotide reductase M2 B (TP53 inducible), [RH, Score=508, Expect=0.0]} {Dmel: FBgn0011704, RnrS, Ribonucleoside diphosphate reductase small subunit, [RH, Score=530, Expect=0.0]} {Celegans: WBGene00004392, rnr-2, Ribonucleoside-diphosphate reductase small chain, [RH, Score=479, Expect=9e-170]} {Smed: dd_Smed_v6_2286_0_1, dd_Smed_v6_2286_0_1, [RH, Score=458, Expect=1e-162]} {RNA1509_24984, RNA1509_34251, RNA1509_50144, RNA1509_8818} {RNA1310_21187.1, RNA1509_24984, RNA1509_34251, RNA1509_50144} {RNA1509_24984, RNA1509_34251, RNA1509_50144, RNA815_4852.1}
6.	MligTC455_31990	61	1.28	Mlig455_070961	Neo: - Age: Down-Up-Down		0.955	-	-	-	-	0.955	-	Mlig455_070961 {REF} {Length: 873} {NoTransDecoderORF} {RNA1509_25657} {RNA1310_41739} {RNA815_26110}
7.	MligTC455_42857	1247	25.98	Mlig455_035150	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.348	EIF1AD	0.955	-	-	0.955	-	-	-	Mlig455_035150 {REF} {Length: 1056} {TRANSSPLICED} {Pfam: Translation initiation factor 1A / IF-1 [PF01176.21, score=67.2]} {Human: ENSG00000175376, EIF1AD, eukaryotic translation initiation factor 1A domain containing, [RH, Score=129, Expect=7e-39]} {Mouse: ENSMUSG00000024841, Eif1ad, eukaryotic translation initiation factor 1A domain containing, [RH, Score=131, Expect=5e-39]} {Dmel: FBgn0051957, CG31957, [RH, Score=114, Expect=2e-32]} {Celegans: WBGene00014112, ZK856.11, Probable RNA-binding protein EIF1AD, [RH, Score=93.6, Expect=1e-24]} {Smed: dd_Smed_v6_8143_0_1, dd_Smed_v6_8143_0_1, [RH, Score=71.6, Expect=2e-16]} {RNA1509_13682, RNA1509_51171, RNA1509_55967} {RNA1310_36398.1, RNA1509_51171, RNA1509_55967} {RNA1509_51171, RNA1509_55967, RNA815_37405}
8.	MligTC455_49615	1273	26.51	Mlig455_029719, Mlig455_034865	Neo: - Age: logFC(26M/2M)=0.276 Regeneration-upregulated BL: 3.129 Regeneration-enriched BL: 3.129	SHOC2	0.952	-	-	-	-	0.952	-	Mlig455_029719 {REF} {Length: 3635} {Pfam: Leucine rich repeat [PF13855.8, score=213.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=106.0]; Leucine Rich Repeat [PF00560.35, score=35.5]; Leucine-rich repeat [PF14580.8, score=32.1]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=22.9]} {Human: ENSG00000108061, SHOC2, SHOC2, leucine rich repeat scaffold protein, [Score=380, Expect=6e-124]} {Mouse: ENSMUSG00000024976, Shoc2, Shoc2, leucine rich repeat scaffold protein, [Score=379, Expect=2e-123]} {Dmel: FBgn0038504, Sur-8, [Score=403, Expect=3e-132]} {Celegans: WBGene00004929, soc-2, Leucine-rich repeat protein soc-2, [Score=359, Expect=3e-116]} {Smed: dd_Smed_v6_1909_0_1, dd_Smed_v6_1909_0_1, [Score=351, Expect=5e-113]} {RNA1509_12617, RNA1509_35671} {RNA1310_9871.1, RNA1509_12617, RNA1509_35671} {RNA1509_12617, RNA1509_35671, RNA815_10195} Mlig455_034865 {REF} {Length: 3049} {Pfam: Leucine rich repeat [PF13855.8, score=181.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=93.1]; Leucine-rich repeat [PF14580.8, score=36.5]; Leucine Rich Repeat [PF00560.35, score=32.7]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=25.7]} {Human: ENSG00000108061, SHOC2, SHOC2, leucine rich repeat scaffold protein, [Score=270, Expect=4e-85]} {Mouse: ENSMUSG00000024976, Shoc2, Shoc2, leucine rich repeat scaffold protein, [Score=270, Expect=3e-85]} {Dmel: FBgn0038504, Sur-8, [Score=286, Expect=7e-91]} {Celegans: WBGene00004929, soc-2, Leucine-rich repeat protein soc-2, [Score=249, Expect=1e-77]} {Smed: dd_Smed_v6_6416_0_1, dd_Smed_v6_6416_0_1, [Score=260, Expect=1e-81]} {RNA1509_12617} {RNA1310_9871.2} {RNA815_10195}
9.	MligTC455_35588	261	5.44	Mlig455_025149	Neo: Int S/G2/M Age: -	HNRNPC	0.95	-	-	-	-	0.950	-	Mlig455_025149 {REF} {Length: 2415} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=44.7]} {Human: ENSG00000092199, HNRNPC, heterogeneous nuclear ribonucleoprotein C (C1/C2), [Score=97.4, Expect=1e-23]; ENSG00000283231, HNRNPCL4, heterogeneous nuclear ribonucleoprotein C-like 4, [Score=92.8, Expect=2e-20]; ENSG00000283292, HNRNPCL3, heterogeneous nuclear ribonucleoprotein C-like 3, [Score=92.8, Expect=2e-20]; ENSG00000277058, HNRNPCL3, heterogeneous nuclear ribonucleoprotein C-like 3, [Score=92.8, Expect=2e-20]; ENSG00000179412, HNRNPCL4, heterogeneous nuclear ribonucleoprotein C-like 4, [Score=92.8, Expect=2e-20]; ENSG00000282095, HNRNPCL4, heterogeneous nuclear ribonucleoprotein C-like 4, [Score=92.8, Expect=2e-20]; ENSG00000179172, HNRNPCL1, heterogeneous nuclear ribonucleoprotein C-like 1, [Score=92.8, Expect=1e-20]; ENSG00000273865, HNRNPCL4, heterogeneous nuclear ribonucleoprotein C-like 4, [Score=92.8, Expect=2e-20]; ENSG00000282175, HNRNPCL1, heterogeneous nuclear ribonucleoprotein C-like 1, [Score=92.8, Expect=1e-20]; ENSG00000282559, HNRNPCL3, heterogeneous nuclear ribonucleoprotein C-like 3, [Score=92.8, Expect=2e-20]} {Mouse: ENSMUSG00000060373, Hnrnpc, heterogeneous nuclear ribonucleoprotein C, [Score=97.4, Expect=2e-22]; ENSMUSG00000027593, Raly, hnRNP-associated with lethal yellow, [Score=92.8, Expect=1e-20]} {Dmel: FBgn0259935, CG42458, [Score=87.4, Expect=5e-18]} {Celegans: WBGene00020399, ztf-4, Zinc finger putative Transcription Factor family, [Score=79.7, Expect=3e-16]} {RNA1509_10281, RNA1509_17287} {RNA1310_12537.1, RNA1509_10281, RNA1509_17287} {RNA1509_10281, RNA1509_17287, RNA815_13057.1}
10.	MligTC455_49104	341	7.1	Mlig455_001510	Neo: - Age: -		0.95	-	-	0.950	-	-	-	Mlig455_001510 {REF} {Length: 1131} {TRANSSPLICED} {Pfam: M-phase phosphoprotein 6 [PF10175.11, score=49.4]} {Mouse: ENSMUSG00000031843, Mphosph6, M phase phosphoprotein 6, [RH, Score=58.5, Expect=3e-10]} {RNA1509_9931} {RNA1310_29022} {RNA815_25246}
11.	MligTC455_52950	85	1.77	Mlig455_017198, Mlig455_048169, Mlig455_048191	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_017198 {REF} {Length: 548} {NoTransDecoderORF} {RNA1310_101984} Mlig455_048169 {REF} {Length: 454} {NoTransDecoderORF} {RNA1310_101984} Mlig455_048191 {REF} {Length: 454} {NoTransDecoderORF} {RNA1310_101984}

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