Data search
Results for MligTC455_42981
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42981 | 670 | 13.97 | Mlig455_060869 | Neo: - Age: Up-Down-Down |
TRIO | Mlig455_060869 {REF} {Length: 8598} {TRANSSPLICED} {Pfam: RhoGEF domain [PF00621.22, score=187.1]; Spectrin repeat [PF00435.23, score=60.5]; Pleckstrin homology domain [PF15411.8, score=24.0]} {Human: ENSG00000038382, TRIO, trio Rho guanine nucleotide exchange factor, [RH, Score=897, Expect=0.0]; ENSG00000160145, KALRN, kalirin RhoGEF kinase, [RH, Score=880, Expect=0.0]} {Mouse: ENSMUSG00000022263, Trio, triple functional domain (PTPRF interacting), [RH, Score=898, Expect=0.0]; ENSMUSG00000061751, Kalrn, kalirin, RhoGEF kinase, [RH, Score=877, Expect=0.0]} {Dmel: FBgn0024277, trio, [RH, Score=805, Expect=0.0]} {Celegans: WBGene00006805, unc-73, Guanine nucleotide exchange factor UNC-73B, [RH, Score=456, Expect=3e-129]} {Smed: dd_Smed_v6_5483_0_1, dd_Smed_v6_5483_0_1, [RH, Score=1088, Expect=0.0]} {RNA1509_3899, RNA1509_56004} {RNA1310_197.1, RNA1509_3899, RNA1509_56004} {RNA1509_3899, RNA1509_56004, RNA815_566.1} |
Cumulative graph for MligTC455_42981
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.021 | 4.081 | 0.98551 | 1.00000 | |
| RegionR2 | -0.148 | 4.081 | 0.74119 | 1.00000 | |
| RegionR3 | -0.623 | 4.081 | 0.10985 | 0.57690 | |
| RegionR4 | -0.797 | 4.081 | 0.06182 | 0.22263 | |
| RegionR5 | -0.052 | 4.081 | 0.87605 | 1.00000 | |
| RegionR6 | 0.314 | 4.081 | 0.38074 | 0.96026 | |
| RegionR7 | 0.784 | 4.081 | 0.09662 | 0.59492 | |
| RegionR8 | 0.543 | 4.081 | 0.41812 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.372 | 4.081 | 0.43329 | 1.00000 | |
| RegenerationR2 | 0.775 | 4.081 | 0.02029 | 0.23404 | |
| RegenerationR3 | 0.786 | 4.081 | 0.04963 | 0.38632 | |
| RegenerationR4 | 0.514 | 4.081 | 0.19269 | 0.63726 | |
| RegenerationR5 | 0.576 | 4.081 | 0.08753 | 0.45640 | |
| RegenerationR6 | 0.585 | 4.081 | 0.10809 | 0.40693 | |
| RegenerationBL | -0.053 | 4.081 | 0.90656 | 1.00000 | |
| RegenerationTP | -0.382 | 4.081 | 0.47451 | 0.88383 |
Genes with expression patterns similar to MligTC455_42981
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42981 | 670 | 13.97 | Mlig455_060869 | Neo: - Age: Up-Down-Down |
TRIO | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_060869 {REF} {Length: 8598} {TRANSSPLICED} {Pfam: RhoGEF domain [PF00621.22, score=187.1]; Spectrin repeat [PF00435.23, score=60.5]; Pleckstrin homology domain [PF15411.8, score=24.0]} {Human: ENSG00000038382, TRIO, trio Rho guanine nucleotide exchange factor, [RH, Score=897, Expect=0.0]; ENSG00000160145, KALRN, kalirin RhoGEF kinase, [RH, Score=880, Expect=0.0]} {Mouse: ENSMUSG00000022263, Trio, triple functional domain (PTPRF interacting), [RH, Score=898, Expect=0.0]; ENSMUSG00000061751, Kalrn, kalirin, RhoGEF kinase, [RH, Score=877, Expect=0.0]} {Dmel: FBgn0024277, trio, [RH, Score=805, Expect=0.0]} {Celegans: WBGene00006805, unc-73, Guanine nucleotide exchange factor UNC-73B, [RH, Score=456, Expect=3e-129]} {Smed: dd_Smed_v6_5483_0_1, dd_Smed_v6_5483_0_1, [RH, Score=1088, Expect=0.0]} {RNA1509_3899, RNA1509_56004} {RNA1310_197.1, RNA1509_3899, RNA1509_56004} {RNA1509_3899, RNA1509_56004, RNA815_566.1} |
| 2. | MligTC455_40677 | 1364 | 28.42 | Mlig455_065228 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.383 Region-specific R5: 1.783 Region-enriched R2: 1.313/0.02638 Regeneration-enriched R6: 2.663 |
RBPMS | 1.69 | - | - | - | - | 0.952 | 0.738 | Mlig455_065228 {REF} {Length: 1378} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=52.0]} {Human: ENSG00000157110, RBPMS, RNA binding protein, mRNA processing factor, [RH, Score=133, Expect=2e-37]} {Mouse: ENSMUSG00000031586, Rbpms, RNA binding protein gene with multiple splicing, [RH, Score=131, Expect=1e-36]; ENSMUSG00000032387, Rbpms2, RNA binding protein with multiple splicing 2, [RH, Score=126, Expect=4e-35]} {Dmel: FBgn0263995, cpo, couch potato, [RH, Score=187, Expect=3e-53]} {Celegans: WBGene00003172, mec-8, Mec-8 protein, [RH, Score=148, Expect=3e-42]} {Smed: dd_Smed_v6_4296_0_3, dd_Smed_v6_4296_0_3, [RH, Score=162, Expect=1e-47]} {RNA1509_3464} {RNA1310_16276} {RNA815_4041.1} |
| 3. | MligTC455_19286 | 687 | 14.3 | Mlig455_067672 | Neo: - Age: - Region-enriched R4: 1.364/0.04890 |
STX12 | 0.966 | - | - | - | - | 0.966 | - | Mlig455_067672 {REF} {Length: 2719} {TRANSSPLICED} {Pfam: Syntaxin-like protein [PF14523.8, score=58.2]; SNARE domain [PF05739.21, score=51.4]; Syntaxin [PF00804.27, score=26.9]} {Human: ENSG00000117758, STX12, syntaxin 12, [RH, Score=129, Expect=2e-35]} {Mouse: ENSMUSG00000019998, Stx7, syntaxin 7, [RH, Score=130, Expect=3e-36]; ENSMUSG00000028879, Stx12, syntaxin 12, [RH, Score=126, Expect=1e-34]} {Dmel: FBgn0267849, Syx7, Syntaxin 7, [RH, Score=114, Expect=7e-30]} {Celegans: WBGene00009478, syx-7, SYntaXin, [RH, Score=104, Expect=9e-27]} {Smed: dd_Smed_v6_4152_0_1, dd_Smed_v6_4152_0_1, [RH, Score=91.3, Expect=6e-22]} {RNA1509_10756, RNA1509_33541, RNA1509_54323} {RNA1310_6233, RNA1509_10756, RNA1509_33541, RNA1509_54323} {RNA1509_10756, RNA1509_33541, RNA1509_54323, RNA815_11207} |
| 4. | MligTC455_13282 | 95 | 1.99 | Mlig455_021294 | Neo: - Age: Down-Up-Down |
0.954 | - | - | - | - | - | 0.954 | Mlig455_021294 {REF} {Length: 840} {NoTransDecoderORF} {RNA1310_63724} {RNA815_38056} | |
| 5. | MligTC455_40326 | 408 | 8.51 | Mlig455_019081, Mlig455_064287 | Neo: - Age: logFC(26M/2M)=0.315 |
0.954 | - | - | - | - | - | 0.954 | Mlig455_019081 {REF} {Length: 2849} {Pfam: Caspase domain [PF00656.24, score=53.3]} {RNA1509_14218} {RNA1310_7645} {RNA815_3621} Mlig455_064287 {REF} {Length: 3515} {Pfam: Caspase domain [PF00656.24, score=50.6]} {RNA1509_14218} {RNA1310_7645, RNA1509_14218} {RNA1509_14218, RNA815_3621} |
|
| 6. | MligTC455_21060 | 340 | 7.09 | Mlig455_070218 | Neo: - Age: - Region-enriched R5: 1.197/0.04030 |
PPAT | 0.95 | - | - | - | - | 0.950 | - | Mlig455_070218 {REF} {Length: 2514} {TRANSSPLICED} {Pfam: Glutamine amidotransferase domain [PF13522.8, score=54.9]; Glutamine amidotransferase domain [PF13537.8, score=51.4]; Phosphoribosyl transferase domain [PF00156.29, score=28.9]; Glutamine amidotransferases class-II [PF13230.8, score=21.9]} {Human: ENSG00000128059, PPAT, phosphoribosyl pyrophosphate amidotransferase, [RH, Score=533, Expect=0.0]} {Mouse: ENSMUSG00000029246, Ppat, phosphoribosyl pyrophosphate amidotransferase, [RH, Score=533, Expect=0.0]} {Dmel: FBgn0041194, Prat2, Phosphoribosylamidotransferase 2, [RH, Score=513, Expect=2e-178]} {Celegans: WBGene00011407, ppat-1, Amidophosphoribosyltransferase, [RH, Score=406, Expect=2e-137]} {Smed: dd_Smed_v6_10667_0_1, dd_Smed_v6_10667_0_1, [RH, Score=518, Expect=0.0]} {RNA1509_21632} {RNA1310_8749, RNA1509_21632} {RNA1509_21632, RNA815_5739} |
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