Data search
Results for MligTC455_40677
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40677 | 1364 | 28.42 | Mlig455_065228 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.383 Region-specific R5: 1.783 Region-enriched R2: 1.313/0.02638 Regeneration-enriched R6: 2.663 |
RBPMS | Mlig455_065228 {REF} {Length: 1378} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=52.0]} {Human: ENSG00000157110, RBPMS, RNA binding protein, mRNA processing factor, [RH, Score=133, Expect=2e-37]} {Mouse: ENSMUSG00000031586, Rbpms, RNA binding protein gene with multiple splicing, [RH, Score=131, Expect=1e-36]; ENSMUSG00000032387, Rbpms2, RNA binding protein with multiple splicing 2, [RH, Score=126, Expect=4e-35]} {Dmel: FBgn0263995, cpo, couch potato, [RH, Score=187, Expect=3e-53]} {Celegans: WBGene00003172, mec-8, Mec-8 protein, [RH, Score=148, Expect=3e-42]} {Smed: dd_Smed_v6_4296_0_3, dd_Smed_v6_4296_0_3, [RH, Score=162, Expect=1e-47]} {RNA1509_3464} {RNA1310_16276} {RNA815_4041.1} |
Cumulative graph for MligTC455_40677
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.306 | 5.093 | 0.20863 | 0.84751 | |
| RegionR2 | 1.313 | 5.093 | 0.00131 | 0.02638 | |
| RegionR3 | -0.302 | 5.093 | 0.37109 | 0.90578 | |
| RegionR4 | -1.655 | 5.093 | 0.00014 | 0.00212 | |
| RegionR5 | 1.109 | 5.093 | 0.00002 | 0.00048 | Specific for R5: 1.783 |
| RegionR6 | -0.177 | 5.093 | 0.60513 | 1.00000 | |
| RegionR7 | 0.473 | 5.093 | 0.26215 | 0.88948 | |
| RegionR8 | 0.546 | 5.093 | 0.29181 | 0.91985 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.614 | 5.093 | 0.77801 | 1.00000 | |
| RegenerationR2 | 1.114 | 5.093 | 0.00019 | 0.01730 | |
| RegenerationR3 | 1.406 | 5.093 | 0.00024 | 0.02031 | |
| RegenerationR4 | 1.914 | 5.093 | 0.00000 | 0.00027 | |
| RegenerationR5 | 0.503 | 5.093 | 0.11592 | 0.51233 | |
| RegenerationR6 | 2.663 | 5.093 | 0.00000 | 0.00000 | |
| RegenerationBL | 1.697 | 5.093 | 0.00001 | 0.00104 | |
| RegenerationTP | 0.449 | 5.093 | 0.33381 | 0.77807 |
Genes with expression patterns similar to MligTC455_40677
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40677 | 1364 | 28.42 | Mlig455_065228 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.383 Region-specific R5: 1.783 Region-enriched R2: 1.313/0.02638 Regeneration-enriched R6: 2.663 |
RBPMS | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_065228 {REF} {Length: 1378} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=52.0]} {Human: ENSG00000157110, RBPMS, RNA binding protein, mRNA processing factor, [RH, Score=133, Expect=2e-37]} {Mouse: ENSMUSG00000031586, Rbpms, RNA binding protein gene with multiple splicing, [RH, Score=131, Expect=1e-36]; ENSMUSG00000032387, Rbpms2, RNA binding protein with multiple splicing 2, [RH, Score=126, Expect=4e-35]} {Dmel: FBgn0263995, cpo, couch potato, [RH, Score=187, Expect=3e-53]} {Celegans: WBGene00003172, mec-8, Mec-8 protein, [RH, Score=148, Expect=3e-42]} {Smed: dd_Smed_v6_4296_0_3, dd_Smed_v6_4296_0_3, [RH, Score=162, Expect=1e-47]} {RNA1509_3464} {RNA1310_16276} {RNA815_4041.1} |
| 2. | MligTC455_40676 | 1450 | 30.21 | Mlig455_006182 | Neo: - Age: logFC(26M/2M)=0.222 Region-specific R5: 1.802 Region-enriched R2: 1.353/0.01437 Regeneration-enriched R6: 2.643 |
RBPMS | 5.857 | 0.982 | 0.971 | 0.990 | 0.978 | 0.960 | 0.976 | Mlig455_006182 {REF} {Length: 2372} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=50.9]} {Human: ENSG00000157110, RBPMS, RNA binding protein, mRNA processing factor, [RH, Score=134, Expect=2e-37]} {Mouse: ENSMUSG00000031586, Rbpms, RNA binding protein gene with multiple splicing, [RH, Score=131, Expect=1e-36]; ENSMUSG00000032387, Rbpms2, RNA binding protein with multiple splicing 2, [RH, Score=129, Expect=1e-35]} {Dmel: FBgn0263995, cpo, couch potato, [Score=186, Expect=6e-54]} {Celegans: WBGene00003172, mec-8, Mec-8 protein, [RH, Score=149, Expect=2e-42]} {Smed: dd_Smed_v6_4296_0_3, dd_Smed_v6_4296_0_3, [RH, Score=165, Expect=1e-48]} {RNA1509_55380} {RNA1310_9719} {RNA815_4041.1} |
| 3. | MligTC455_53166 | 216 | 4.5 | Mlig455_040159 | Neo: - Age: - |
PCDH9 | 1.747 | - | - | - | 0.958 | 0.789 | - | Mlig455_040159 {REF} {Length: 4572} {Pfam: Cadherin domain [PF00028.19, score=274.8]; Cadherin-like [PF08266.14, score=39.0]; Cadherin-like [PF16184.7, score=26.4]} {Human: ENSG00000184226, PCDH9, protocadherin 9, [RH, Score=332, Expect=1e-95]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [RH, Score=321, Expect=2e-91]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [RH, Score=319, Expect=9e-91]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [RH, Score=332, Expect=1e-95]} {Dmel: FBgn0261574, kug, kugelei, [Score=216, Expect=1e-56]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=216, Expect=6e-57]} {Smed: dd_Smed_v6_17019_0_1, dd_Smed_v6_17019_0_1, [Score=285, Expect=2e-81]} {RNA1509_52268} {RNA1310_13234.1} {RNA815_20861} |
| 4. | MligTC455_42981 | 670 | 13.97 | Mlig455_060869 | Neo: - Age: Up-Down-Down |
TRIO | 1.69 | - | - | - | - | 0.952 | 0.738 | Mlig455_060869 {REF} {Length: 8598} {TRANSSPLICED} {Pfam: RhoGEF domain [PF00621.22, score=187.1]; Spectrin repeat [PF00435.23, score=60.5]; Pleckstrin homology domain [PF15411.8, score=24.0]} {Human: ENSG00000038382, TRIO, trio Rho guanine nucleotide exchange factor, [RH, Score=897, Expect=0.0]; ENSG00000160145, KALRN, kalirin RhoGEF kinase, [RH, Score=880, Expect=0.0]} {Mouse: ENSMUSG00000022263, Trio, triple functional domain (PTPRF interacting), [RH, Score=898, Expect=0.0]; ENSMUSG00000061751, Kalrn, kalirin, RhoGEF kinase, [RH, Score=877, Expect=0.0]} {Dmel: FBgn0024277, trio, [RH, Score=805, Expect=0.0]} {Celegans: WBGene00006805, unc-73, Guanine nucleotide exchange factor UNC-73B, [RH, Score=456, Expect=3e-129]} {Smed: dd_Smed_v6_5483_0_1, dd_Smed_v6_5483_0_1, [RH, Score=1088, Expect=0.0]} {RNA1509_3899, RNA1509_56004} {RNA1310_197.1, RNA1509_3899, RNA1509_56004} {RNA1509_3899, RNA1509_56004, RNA815_566.1} |
| 5. | MligTC455_31612 | 226 | 4.71 | Mlig455_035311 | Neo: - Age: Up-Down-Down |
PRR9 | 0.967 | - | - | - | 0.967 | - | - | Mlig455_035311 {REF} {Length: 5108} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=42.7, Expect=1e-05]} {RNA1509_11174} {RNA1310_55188} {RNA815_14259} |
| 6. | MligTC455_48984 | 903 | 18.82 | Mlig455_006597 | Neo: - Age: - Region-enriched R5: 1.603/0.04044 |
HEXB | 0.959 | - | - | - | - | 0.959 | - | Mlig455_006597 {REF} {Length: 4049} {TRANSSPLICED} {Pfam: Glycosyl hydrolase family 20, catalytic domain [PF00728.24, score=280.8]; beta-acetyl hexosaminidase like [PF14845.8, score=64.9]; Glycosyl hydrolase family 20, domain 2 [PF02838.17, score=25.4]} {Human: ENSG00000049860, HEXB, hexosaminidase subunit beta, [Score=405, Expect=3e-131]; ENSG00000213614, HEXA, hexosaminidase subunit alpha, [Score=393, Expect=4e-127]} {Mouse: ENSMUSG00000021665, Hexb, hexosaminidase B, [Score=397, Expect=7e-129]; ENSMUSG00000025232, Hexa, hexosaminidase A, [Score=395, Expect=3e-128]} {Dmel: FBgn0045063, fdl, fused lobes, [RH, Score=214, Expect=4e-59]} {Celegans: WBGene00020509, hex-1, Beta-hexosaminidase A, [Score=313, Expect=9e-97]} {Smed: dd_Smed_v6_3964_0_1, dd_Smed_v6_3964_0_1, [RH, Score=477, Expect=9e-157]} {RNA1509_11107} {RNA1310_1997.1} {RNA815_5636} |
| 7. | MligTC455_19286 | 687 | 14.3 | Mlig455_067672 | Neo: - Age: - Region-enriched R4: 1.364/0.04890 |
STX12 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_067672 {REF} {Length: 2719} {TRANSSPLICED} {Pfam: Syntaxin-like protein [PF14523.8, score=58.2]; SNARE domain [PF05739.21, score=51.4]; Syntaxin [PF00804.27, score=26.9]} {Human: ENSG00000117758, STX12, syntaxin 12, [RH, Score=129, Expect=2e-35]} {Mouse: ENSMUSG00000019998, Stx7, syntaxin 7, [RH, Score=130, Expect=3e-36]; ENSMUSG00000028879, Stx12, syntaxin 12, [RH, Score=126, Expect=1e-34]} {Dmel: FBgn0267849, Syx7, Syntaxin 7, [RH, Score=114, Expect=7e-30]} {Celegans: WBGene00009478, syx-7, SYntaXin, [RH, Score=104, Expect=9e-27]} {Smed: dd_Smed_v6_4152_0_1, dd_Smed_v6_4152_0_1, [RH, Score=91.3, Expect=6e-22]} {RNA1509_10756, RNA1509_33541, RNA1509_54323} {RNA1310_6233, RNA1509_10756, RNA1509_33541, RNA1509_54323} {RNA1509_10756, RNA1509_33541, RNA1509_54323, RNA815_11207} |
| 8. | MligTC455_18190 | 116 | 2.41 | Mlig455_011827 | Neo: - Age: Down-Up-Down |
0.953 | - | - | - | 0.953 | - | - | Mlig455_011827 {REF} {Length: 1692} {TRANSSPLICED} {Pfam: THAP domain [PF05485.14, score=49.7]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=23.1]; Anti-sigma-K factor rskA [PF10099.11, score=22.6]} {RNA1509_21728} {RNA1310_31334.2} {RNA815_26124} | |
| 9. | MligTC455_25913 | 1053 | 21.93 | Mlig455_030143 | Neo: - Age: Up-Down-Down Region-enriched R6: 1.237/0.00075 |
NR1I2 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_030143 {REF} {Length: 4514} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=77.6]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=127, Expect=9e-31]} {Mouse: ENSMUSG00000022479, Vdr, vitamin D (1,25-dihydroxyvitamin D3) receptor, [Score=103, Expect=5e-23]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [RH, Score=124, Expect=2e-29]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [RH, Score=131, Expect=2e-31]} {Smed: dd_Smed_v6_11714_0_1, dd_Smed_v6_11714_0_1, [Score=113, Expect=1e-26]} {RNA1509_12812} {RNA1310_8656.2, RNA1509_12812} {RNA1509_12812, RNA815_12412} |
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