Data search
Results for MligTC455_53909
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53909 | 765 | 15.95 | Mlig455_034369 | Neo: - Age: - Regeneration-upregulated BL: 3.468 Regeneration-enriched BL: 3.468 |
SBSN | Mlig455_034369 {REF} {Length: 2517} {Pfam: Apolipoprotein A1/A4/E domain [PF01442.20, score=20.1]} {Human: ENSG00000189001, SBSN, suprabasin, [Score=81.6, Expect=1e-15]} {Mouse: ENSMUSG00000040838, Gm11639, predicted gene 11639, [Score=71.2, Expect=2e-12]} {Celegans: WBGene00001113, dur-1, Dauer Up-Regulated, [Score=120, Expect=3e-28]} {RNA1509_53891} {RNA1310_42336} {RNA815_24531} |
Cumulative graph for MligTC455_53909
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.741 | 4.133 | 0.17536 | 0.80171 | |
| RegionR2 | 1.215 | 4.133 | 0.23075 | 0.60316 | |
| RegionR3 | 0.847 | 4.133 | 0.37354 | 0.90757 | |
| RegionR4 | 0.951 | 4.133 | 0.36680 | 0.68991 | |
| RegionR5 | 1.237 | 4.133 | 0.15425 | 0.41063 | |
| RegionR6 | 0.569 | 4.133 | 0.56957 | 1.00000 | |
| RegionR7 | -0.718 | 4.133 | 0.97457 | 1.00000 | |
| RegionR8 | 1.64 | 4.133 | 0.13936 | 0.68212 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 6.555 | 4.133 | 0.11716 | 0.84449 | |
| RegenerationR2 | 1.326 | 4.133 | 0.06099 | 0.40583 | |
| RegenerationR3 | 1.279 | 4.133 | 0.09820 | 0.50146 | |
| RegenerationR4 | 1.572 | 4.133 | 0.04157 | 0.32851 | |
| RegenerationR5 | 0.015 | 4.133 | 0.98814 | 1.00000 | |
| RegenerationR6 | 1.679 | 4.133 | 0.02870 | 0.21132 | |
| RegenerationBL | 3.468 | 4.133 | 0.00000 | 0.00002 | Specific for BL: 3.468 |
| RegenerationTP | 1.257 | 4.133 | 0.14761 | 0.57125 |
Genes with expression patterns similar to MligTC455_53909
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53909 | 765 | 15.95 | Mlig455_034369 | Neo: - Age: - Regeneration-upregulated BL: 3.468 Regeneration-enriched BL: 3.468 |
SBSN | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_034369 {REF} {Length: 2517} {Pfam: Apolipoprotein A1/A4/E domain [PF01442.20, score=20.1]} {Human: ENSG00000189001, SBSN, suprabasin, [Score=81.6, Expect=1e-15]} {Mouse: ENSMUSG00000040838, Gm11639, predicted gene 11639, [Score=71.2, Expect=2e-12]} {Celegans: WBGene00001113, dur-1, Dauer Up-Regulated, [Score=120, Expect=3e-28]} {RNA1509_53891} {RNA1310_42336} {RNA815_24531} |
| 2. | MligTC455_49265 | 4822 | 100.45 | Mlig455_062250 | Neo: - Age: - Regeneration-enriched BL: 2.528 |
2.734 | 0.825 | - | - | 0.959 | 0.950 | - | Mlig455_062250 {REF} {Length: 11199} {RNA1509_4161} {RNA1310_2565} {RNA815_853} | |
| 3. | MligTC455_41327 | 6480 | 135 | Mlig455_007904, Mlig455_008008 | Neo: - Age: Down-Up-Down Regeneration-upregulated BL: 2.831 Regeneration-enriched BL: 2.831 |
1.906 | - | - | - | 0.958 | 0.948 | - | Mlig455_007904 {REF} {Length: 2479} {Pfam: F5/8 type C domain [PF00754.27, score=52.7]} {Dmel: FBgn0001083, fw, furrowed, [Score=50.4, Expect=4e-06]} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=46.2, Expect=4e-06]} {RNA1509_53019} {RNA1310_2657.1} {RNA815_2454} Mlig455_008008 {REF} {Length: 2766} {Pfam: F5/8 type C domain [PF00754.27, score=48.7]} {Dmel: FBgn0001083, fw, furrowed, [Score=50.4, Expect=4e-06]} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=45.8, Expect=7e-06]} {RNA1509_53019} {RNA1310_2657.1} {RNA815_2454} |
|
| 4. | MligTC455_37699 | 9492 | 197.74 | Mlig455_034962 | Neo: - Age: - Regeneration-upregulated BL: 2.634 Regeneration-enriched BL: 2.634 |
HMCN2 | 1.874 | - | - | - | 0.922 | 0.952 | - | Mlig455_034962 {REF} {Length: 5538} {Pfam: von Willebrand factor type A domain [PF13519.8, score=200.3]; von Willebrand factor type A domain [PF13768.8, score=108.6]; Protein of unknown function (DUF1638) [PF07796.13, score=47.0]; VWA domain containing CoxE-like protein [PF05762.16, score=46.2]; NTPase [PF03266.17, score=26.8]; Colicin Ia [PF11504.10, score=25.5]; Family of unknown function (DUF5347) [PF17282.4, score=20.6]} {Human: ENSG00000148357, HMCN2, hemicentin 2, [Score=73.2, Expect=4e-12]; ENSG00000143341, HMCN1, hemicentin 1, [Score=71.6, Expect=1e-11]} {Mouse: ENSMUSG00000055632, Hmcn2, hemicentin 2, [Score=73.6, Expect=2e-12]; ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=72.0, Expect=7e-12]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=93.2, Expect=1e-18]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=92.8, Expect=1e-18]} {RNA1509_415, RNA1509_59657} {RNA1310_3126.1, RNA1509_59657} {RNA1509_59657, RNA815_1151.1} |
| 5. | MligTC455_47052 | 3864 | 80.49 | Mlig455_070925 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.887 Regeneration-upregulated BL: 2.164 Regeneration-enriched BL: 2.164 |
1.843 | - | - | - | 0.967 | 0.876 | - | Mlig455_070925 {REF} {Length: 2072} {Pfam: F5/8 type C domain [PF00754.27, score=55.1]} {Smed: dd_Smed_v6_15258_0_1, dd_Smed_v6_15258_0_1, [Score=52.0, Expect=1e-07]} {RNA1509_15305} {RNA1310_30437.2} {RNA815_12353} | |
| 6. | MligTC455_43158 | 3969 | 82.69 | Mlig455_013641 | Neo: - Age: Down-Up-Up |
1.797 | - | - | - | 0.969 | 0.828 | - | Mlig455_013641 {REF} {Length: 2238} {Pfam: Cupin-like domain [PF13621.8, score=36.5]} {Dmel: FBgn0038510, CG14331, [RH, Score=217, Expect=3e-68]} {Smed: dd_Smed_v6_8235_0_1, dd_Smed_v6_8235_0_1, [Score=185, Expect=2e-55]} {RNA1509_13420, RNA1509_34480, RNA1509_38034, RNA1509_8687, RNA1509_9888} {RNA1310_15437, RNA1509_13420, RNA1509_34480, RNA1509_38034, RNA1509_8687, RNA1509_9888} {RNA1509_13420, RNA1509_34480, RNA1509_38034, RNA1509_8687, RNA1509_9888, RNA815_7588} | |
| 7. | MligTC455_44536 | 178 | 3.71 | Mlig455_002956 | Neo: - Age: - |
ALX3 | 1.793 | - | - | - | 0.953 | - | 0.840 | Mlig455_002956 {REF} {Length: 2217} {Pfam: Homeodomain [PF00046.31, score=82.6]} {Human: ENSG00000156150, ALX3, ALX homeobox 3, [RH, Score=135, Expect=5e-36]; ENSG00000052850, ALX4, ALX homeobox 4, [RH, Score=134, Expect=4e-35]; ENSG00000180318, ALX1, ALX homeobox 1, [RH, Score=129, Expect=6e-34]} {Mouse: ENSMUSG00000040310, Alx4, aristaless-like homeobox 4, [RH, Score=134, Expect=4e-35]; ENSMUSG00000014603, Alx3, aristaless-like homeobox 3, [RH, Score=134, Expect=1e-35]; ENSMUSG00000036602, Alx1, ALX homeobox 1, [RH, Score=129, Expect=1e-34]} {Dmel: FBgn0020617, Rx, Retinal Homeobox, [RH, Score=119, Expect=8e-29]} {Celegans: WBGene00044330, alr-1, AristaLess (Drosophila homeodomain) Related, [RH, Score=116, Expect=4e-29]} {Smed: dd_Smed_v6_16955_0_1, dd_Smed_v6_16955_0_1, [RH, Score=132, Expect=7e-35]} {RNA1310_34642} {RNA815_45742} |
| 8. | MligTC455_47051 | 3486 | 72.62 | Mlig455_009503 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.389 Regeneration-upregulated BL: 1.613 Regeneration-enriched BL: 1.613 |
1.737 | 0.765 | - | - | 0.972 | - | - | Mlig455_009503 {REF} {Length: 2503} {Pfam: F5/8 type C domain [PF00754.27, score=79.3]; Sad1 / UNC-like C-terminal [PF07738.15, score=27.0]} {Smed: dd_Smed_v6_15258_0_1, dd_Smed_v6_15258_0_1, [Score=51.2, Expect=3e-07]} {RNA1509_20089} {RNA1310_38721} {RNA815_6421.1} | |
| 9. | MligTC455_41773 | 342 | 7.12 | Mlig455_033729 | Neo: - Age: logFC(26M/2M)=-0.405 Region-enriched R4: 2.782/0.01934 Regeneration-upregulated BL: 2.334 Regeneration-enriched BL: 2.334 |
RAB10 | 1.694 | - | - | - | 0.737 | 0.957 | - | Mlig455_033729 {REF} {Length: 1706} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=216.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=120.4]; ADP-ribosylation factor family [PF00025.23, score=63.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=29.4]; Gtr1/RagA G protein conserved region [PF04670.14, score=27.8]; RsgA GTPase [PF03193.18, score=23.0]; 50S ribosome-binding GTPase [PF01926.25, score=18.9]} {Human: ENSG00000084733, RAB10, RAB10, member RAS oncogene family, [Score=259, Expect=2e-88]} {Mouse: ENSMUSG00000020671, Rab10, RAB10, member RAS oncogene family, [Score=259, Expect=1e-88]} {Dmel: FBgn0015789, Rab10, [Score=246, Expect=2e-83]} {Celegans: WBGene00004273, rab-10, Ras-related protein Rab-10, [Score=244, Expect=1e-82]} {Smed: dd_Smed_v6_3485_0_1, dd_Smed_v6_3485_0_1, [Score=224, Expect=1e-74]} {RNA1509_59464} {RNA1310_45042} {RNA815_22097} |
| 10. | MligTC455_41510 | 194 | 4.04 | Mlig455_067738 | Neo: - Age: - |
CDK14 | 1.689 | - | 0.735 | - | 0.954 | - | - | Mlig455_067738 {REF} {Length: 5422} {Pfam: Protein kinase domain [PF00069.27, score=227.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=112.1]} {Human: ENSG00000058091, CDK14, cyclin dependent kinase 14, [RH, Score=423, Expect=4e-141]; ENSG00000138395, CDK15, cyclin dependent kinase 15, [RH, Score=412, Expect=1e-137]} {Mouse: ENSMUSG00000028926, Cdk14, cyclin-dependent kinase 14, [RH, Score=424, Expect=5e-141]; ENSMUSG00000026023, Cdk15, cyclin-dependent kinase 15, [RH, Score=405, Expect=2e-134]} {Dmel: FBgn0005640, Eip63E, Ecdysone-induced protein 63E, [RH, Score=441, Expect=6e-147]} {Celegans: WBGene00022519, ZC123.4, [RH, Score=348, Expect=5e-111]} {Smed: dd_Smed_v6_11023_0_1, dd_Smed_v6_11023_0_1, [RH, Score=461, Expect=3e-152]} {RNA1509_30378} {RNA1310_6181} {RNA815_15743} |
| 11. | MligTC455_30473 | 93 | 1.93 | Mlig455_023180 | Neo: - Age: - |
0.962 | - | - | - | 0.962 | - | - | Mlig455_023180 {REF} {Length: 3596} {RNA1509_17207} {RNA1310_664.1} {RNA815_42811} | |
| 12. | MligTC455_34259 | 334 | 6.95 | Mlig455_042786 | Neo: - Age: logFC(26M/2M)=0.426 |
UNC80 | 0.96 | 0.960 | - | - | - | - | - | Mlig455_042786 {REF} {Length: 12437} {TRANSSPLICED} {Pfam: Protein UNC80 [PF19424.1, score=849.5]} {Human: ENSG00000144406, UNC80, unc-80 homolog, NALCN channel complex subunit, [RH, Score=656, Expect=0.0]} {Mouse: ENSMUSG00000055567, Unc80, unc-80, NALCN activator, [RH, Score=836, Expect=0.0]} {Dmel: FBgn0039536, unc80, uncoordinated 80, [RH, Score=858, Expect=0.0]} {Celegans: WBGene00006812, unc-80, [RH, Score=848, Expect=0.0]} {Smed: dd_Smed_v6_5118_0_1, dd_Smed_v6_5118_0_1, [RH, Score=1083, Expect=0.0]} {RNA1509_5680} {RNA1310_1690.1} {RNA815_194.1} |
| 13. | MligTC455_46693 | 3882 | 80.87 | Mlig455_025430 | Neo: - Age: - |
QRICH2 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_025430 {REF} {Length: 1972} {Human: ENSG00000129646, QRICH2, glutamine rich 2, [Score=52.8, Expect=7e-07]} {RNA1509_26782, RNA1509_3289, RNA1509_36655} {RNA1310_19397.2, RNA1509_26782, RNA1509_3289, RNA1509_36655} {RNA1509_26782, RNA1509_3289, RNA1509_36655, RNA815_16071.1} |
| 14. | MligTC455_47233 | 135 | 2.8 | Mlig455_050486 | Neo: - Age: - |
0.958 | 0.958 | - | - | - | - | - | Mlig455_050486 {REF} {Length: 3564} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=40.8]; Prokaryotic RING finger family 4 [PF14447.8, score=20.8]; Ring finger domain [PF13639.8, score=20.7]} {RNA1509_49389, RNA1509_50445} {RNA1310_32377.1, RNA1509_49389, RNA1509_50445} {RNA1509_49389, RNA1509_50445, RNA815_33010} | |
| 15. | MligTC455_19382 | 51 | 1.07 | Mlig455_032372 | Neo: - Age: - Region-enriched R2: 7.387/0.00125 |
GABBR2 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_032372 {REF} {Length: 3616} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=166.5]; Receptor family ligand binding region [PF01094.30, score=93.5]} {Human: ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=323, Expect=4e-95]} {Mouse: ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=322, Expect=7e-95]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=352, Expect=3e-104]} {Celegans: WBGene00022675, gbb-2, GABA B receptor subunit; GABAB2 receptor subunit, [Score=317, Expect=3e-94]} {Smed: dd_Smed_v6_59890_0_1, dd_Smed_v6_59890_0_1, [Score=159, Expect=1e-44]} {RNA1509_48457} {RNA1310_28999} {RNA815_30452} |
| 16. | MligTC455_28523 | 58 | 1.21 | Mlig455_046501 | Neo: - Age: - |
0.953 | - | - | - | 0.953 | - | - | Mlig455_046501 {REF} {Length: 1657} {TRANSSPLICED} {RNA1509_7244} {RNA1310_4258.1} {RNA815_1517} | |
| 17. | MligTC455_39145 | 860 | 17.92 | Mlig455_045710 | Neo: - Age: Down-Up-Down Region-enriched R2: 1.035/0.04635 |
0.953 | 0.953 | - | - | - | - | - | Mlig455_045710 {REF} {Length: 2657} {Pfam: Family of unknown function (DUF5580) [PF17743.3, score=80.4]} {Smed: dd_Smed_v6_9326_0_1, dd_Smed_v6_9326_0_1, [RH, Score=180, Expect=1e-49]} {RNA1509_11160, RNA1509_32698} {RNA1310_8387, RNA1509_11160, RNA1509_32698} {RNA1509_11160, RNA1509_32698, RNA815_15696.1} | |
| 18. | MligTC455_15110 | 44 | 0.91 | Mlig455_047180 | Neo: Irradiation |
0.952 | - | - | - | - | - | 0.952 | Mlig455_047180 {REF} {Length: 3150} {RNA1509_12062, RNA1509_1568, RNA1509_8241} {RNA1310_6375.1, RNA1509_12062, RNA1509_1568, RNA1509_8241} {RNA1509_12062, RNA1509_1568, RNA1509_8241, RNA815_2043} | |
| 19. | MligTC455_52149 | 336 | 7.01 | Mlig455_012974 | Neo: - |
TTLL6 | 0.95 | 0.950 | - | - | - | - | - | Mlig455_012974 {REF} {Length: 3712} {TRANSSPLICED} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=270.4]; YheC/D like ATP-grasp [PF14398.8, score=23.7]; Sugar-transfer associated ATP-grasp [PF14397.8, score=18.8]} {Human: ENSG00000170703, TTLL6, tubulin tyrosine ligase like 6, [RH, Score=532, Expect=4e-174]} {Mouse: ENSMUSG00000045467, Ttll13, tubulin tyrosine ligase-like family, member 13, [Score=561, Expect=0.0]} {Dmel: FBgn0039501, CG5987, [RH, Score=454, Expect=7e-147]} {Celegans: WBGene00019230, ttll-11, Tubulin Tyrosine Ligase Like, [Score=212, Expect=1e-57]} {Smed: dd_Smed_v6_8131_0_1, dd_Smed_v6_8131_0_1, [RH, Score=706, Expect=0.0]} {RNA1509_15498} {RNA1310_4663, RNA1509_15498} {RNA1509_15498, RNA815_9052} |
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