Data search
Results for MligTC455_43235
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_43235 | 557 | 11.61 | Mlig455_006186, Mlig455_065226 | Neo: - Age: Down-Up-Up |
Mlig455_006186 {REF} {Length: 813} {TRANSSPLICED} {RNA1509_28487, RNA1509_36490} {RNA1310_42840, RNA1509_28487, RNA1509_36490} {RNA1509_28487, RNA1509_36490, RNA815_21578} Mlig455_065226 {REF} {Length: 813} {TRANSSPLICED} {RNA1509_28487} {RNA1310_42840} {RNA815_21578} |
Cumulative graph for MligTC455_43235
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.382 | 3.973 | 0.34123 | 0.98595 | |
| RegionR2 | 0.538 | 3.973 | 0.39431 | 0.78873 | |
| RegionR3 | 0.2 | 3.973 | 0.70293 | 1.00000 | |
| RegionR4 | 1.281 | 3.973 | 0.03143 | 0.14048 | |
| RegionR5 | -0.709 | 3.973 | 0.20149 | 0.49249 | |
| RegionR6 | 0.381 | 3.973 | 0.47254 | 1.00000 | |
| RegionR7 | -0.683 | 3.973 | 0.31155 | 0.94548 | |
| RegionR8 | 0.373 | 3.973 | 0.58732 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.907 | 3.973 | 0.25695 | 0.96756 | |
| RegenerationR2 | -1.374 | 3.973 | 0.02268 | 0.24778 | |
| RegenerationR3 | -0.712 | 3.973 | 0.26251 | 0.69736 | |
| RegenerationR4 | -0.646 | 3.973 | 0.30297 | 0.74456 | |
| RegenerationR5 | 0.224 | 3.973 | 0.71349 | 0.95703 | |
| RegenerationR6 | -0.9 | 3.973 | 0.16130 | 0.49019 | |
| RegenerationBL | -1.307 | 3.973 | 0.08397 | 0.33955 | |
| RegenerationTP | -0.564 | 3.973 | 0.44940 | 0.86667 |
Genes with expression patterns similar to MligTC455_43235
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_43235 | 557 | 11.61 | Mlig455_006186, Mlig455_065226 | Neo: - Age: Down-Up-Up |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_006186 {REF} {Length: 813} {TRANSSPLICED} {RNA1509_28487, RNA1509_36490} {RNA1310_42840, RNA1509_28487, RNA1509_36490} {RNA1509_28487, RNA1509_36490, RNA815_21578} Mlig455_065226 {REF} {Length: 813} {TRANSSPLICED} {RNA1509_28487} {RNA1310_42840} {RNA815_21578} |
|
| 2. | MligTC455_18695 | 490 | 10.22 | Mlig455_008630, Mlig455_030294 | Neo: - Age: logFC(26M/2M)=0.299 |
C2orf16, ZRSR2 | 1.677 | - | - | 0.715 | - | - | 0.962 | Mlig455_008630 {REF} {Length: 2079} {TRANSSPLICED} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=31.8]} {Human: ENSG00000169249, ZRSR2, zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2, [Score=108, Expect=2e-24]} {Mouse: ENSMUSG00000044068, Zrsr1, zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1, [RH, Score=112, Expect=4e-26]} {Dmel: FBgn0031628, CG3294, [Score=95.9, Expect=9e-21]} {Celegans: WBGene00006698, uaf-2, U2AF splicing factor, [Score=78.2, Expect=9e-16]} {Smed: dd_Smed_v6_9455_0_3, dd_Smed_v6_9455_0_3, [RH, Score=138, Expect=9e-36]} {RNA1509_44063} {RNA1310_9280} {RNA815_19791.1} Mlig455_030294 {REF} {Length: 2541} {TRANSSPLICED} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=31.5]} {Human: ENSG00000221843, C2orf16, chromosome 2 open reading frame 16, [Score=121, Expect=3e-27]} {Mouse: ENSMUSG00000044068, Zrsr1, zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1, [RH, Score=111, Expect=1e-25]} {Dmel: FBgn0031628, CG3294, [Score=96.3, Expect=1e-20]} {Celegans: WBGene00006698, uaf-2, U2AF splicing factor, [Score=78.6, Expect=1e-15]} {Smed: dd_Smed_v6_9455_0_3, dd_Smed_v6_9455_0_3, [RH, Score=135, Expect=2e-34]} {RNA1509_44063} {RNA1310_9280, RNA1509_44063} {RNA1509_44063, RNA815_19791.1} |
| 3. | MligTC455_49738 | 135 | 2.81 | Mlig455_038770 | Neo: - Age: - |
0.973 | - | - | - | - | - | 0.973 | Mlig455_038770 {REF} {Length: 641} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_27803} {RNA1310_53700, RNA1509_27803} {RNA1509_27803, RNA815_27923} | |
| 4. | MligTC455_47873 | 73 | 1.51 | Mlig455_061974 | Neo: - Age: - |
FAM102B | 0.969 | - | - | - | - | - | 0.969 | Mlig455_061974 {REF} {Length: 3488} {TRANSSPLICED} {Pfam: N-terminal C2 in EEIG1 and EHBP1 proteins [PF10358.11, score=59.0]} {Human: ENSG00000162636, FAM102B, family with sequence similarity 102 member B, [RH, Score=125, Expect=3e-32]} {Mouse: ENSMUSG00000040339, Fam102b, family with sequence similarity 102, member B, [RH, Score=124, Expect=4e-32]} {Dmel: FBgn0032938, CG8671, [RH, Score=149, Expect=2e-39]} {Celegans: WBGene00006368, sym-3, SYM-3B, [RH, Score=105, Expect=1e-25]} {Smed: dd_Smed_v6_5362_0_1, dd_Smed_v6_5362_0_1, [RH, Score=119, Expect=3e-30]} {RNA1509_25898} {RNA1310_24346, RNA1509_25898} {RNA1509_25898, RNA815_12822} |
| 5. | MligTC455_31159 | 230 | 4.8 | Mlig455_019494, Mlig455_066901 | Neo: - Age: - |
DHX36, TTK | 0.968 | - | - | - | - | - | 0.968 | Mlig455_019494 {REF} {Length: 1811} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=134.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=53.4]} {Human: ENSG00000112742, TTK, TTK protein kinase, [RH, Score=129, Expect=1e-30]} {Mouse: ENSMUSG00000038379, Ttk, Ttk protein kinase, [RH, Score=139, Expect=4e-34]} {Dmel: FBgn0000063, Mps1, Monopolar spindle 1, [RH, Score=124, Expect=2e-29]} {Celegans: WBGene00013994, ZK524.4, [Score=85.9, Expect=3e-17]} {Smed: dd_Smed_v6_9041_0_1, dd_Smed_v6_9041_0_1, [Score=87.4, Expect=9e-19]} {RNA1509_28050} {RNA1310_12256} {RNA815_12520} Mlig455_066901 {REF} {Length: 7246} {Pfam: Protein kinase domain [PF00069.27, score=131.6]; Helicase associated domain (HA2) [PF04408.25, score=62.2]; Helicase conserved C-terminal domain [PF00271.33, score=57.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=51.2]; DEAD/DEAH box helicase [PF00270.31, score=43.1]} {Human: ENSG00000174953, DHX36, DEAH-box helicase 36, [RH, Score=451, Expect=9e-139]} {Mouse: ENSMUSG00000027770, Dhx36, DEAH (Asp-Glu-Ala-His) box polypeptide 36, [Score=469, Expect=2e-143]} {Dmel: FBgn0032883, Rhau, RHAU helicase, [RH, Score=461, Expect=4e-141]} {Celegans: WBGene00004355, rha-1, Probable ATP-dependent RNA helicase A, [Score=295, Expect=3e-81]} {Smed: dd_Smed_v6_4815_0_2, dd_Smed_v6_4815_0_2, [Score=334, Expect=2e-93]} {RNA1509_6035} {RNA1310_2472.1} {RNA815_1474} |
| 6. | MligTC455_49796 | 155 | 3.22 | Mlig455_008307 | Neo: - |
0.964 | - | - | - | - | - | 0.964 | Mlig455_008307 {REF} {Length: 1315} {RNA1509_54157} {RNA1310_15226.1} {RNA815_21558} | |
| 7. | MligTC455_50094 | 148 | 3.09 | Mlig455_042020 | Neo: Irradiation Age: - Region-enriched R4: 2.698/0.01391 |
RNF216 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_042020 {REF} {Length: 2245} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=27.5]; FtsX extracellular domain [PF18075.3, score=19.7]} {Human: ENSG00000011275, RNF216, ring finger protein 216, [Score=174, Expect=5e-45]} {Mouse: ENSMUSG00000045078, Rnf216, ring finger protein 216, [Score=171, Expect=2e-44]} {Dmel: FBgn0025186, ari-2, ariadne 2, [Score=60.1, Expect=4e-09]} {Celegans: WBGene00016157, C27A12.7, [Score=67.0, Expect=2e-11]} {Smed: dd_Smed_v6_4224_0_1, dd_Smed_v6_4224_0_1, [Score=60.8, Expect=1e-09]} {RNA1509_15865} {RNA1310_11127} {RNA815_4010.1} |
| 8. | MligTC455_36323 | 204 | 4.24 | Mlig455_013277 | Neo: - Age: logFC(26M/2M)=0.456 |
TMC5 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_013277 {REF} {Length: 3130} {TRANSSPLICED} {Pfam: TMC domain [PF07810.15, score=52.5]} {Human: ENSG00000103534, TMC5, transmembrane channel like 5, [Score=112, Expect=4e-25]} {Mouse: ENSMUSG00000042246, Tmc7, transmembrane channel-like gene family 7, [Score=96.7, Expect=3e-20]; ENSMUSG00000030650, Tmc5, transmembrane channel-like gene family 5, [Score=95.5, Expect=7e-20]} {RNA1509_58030} {RNA1310_8396} {RNA815_832.1} |
| 9. | MligTC455_13744 | 124 | 2.59 | Mlig455_039419 | Neo: - Age: Down-Down-Up |
0.961 | - | - | - | - | - | 0.961 | Mlig455_039419 {REF} {Length: 1298} {RNA1509_53208} {RNA1310_28550} {RNA815_56261} | |
| 10. | MligTC455_28245 | 283 | 5.89 | Mlig455_000124 | Neo: - Age: Up-Down-Down |
0.961 | - | - | - | - | - | 0.961 | Mlig455_000124 {REF} {Length: 711} {NoTransDecoderORF} {RNA1509_50502} {RNA1310_51511} {RNA815_58548} | |
| 11. | MligTC455_13959 | 747 | 15.56 | Mlig455_003610, Mlig455_041582 | Neo: - Age: logFC(26M/2M)=0.281 Region-enriched R3: 1.201/0.04227 |
GK3P | 0.96 | - | - | - | - | - | 0.960 | Mlig455_003610 {REF} {Length: 2428} {TRANSSPLICED} {Pfam: FGGY family of carbohydrate kinases, N-terminal domain [PF00370.23, score=226.2]; FGGY family of carbohydrate kinases, C-terminal domain [PF02782.18, score=185.3]} {Human: ENSG00000229894, GK3P, glycerol kinase 3 pseudogene, [RH, Score=506, Expect=9e-175]; ENSG00000198814, GK, glycerol kinase, [RH, Score=504, Expect=3e-174]; ENSG00000196475, GK2, glycerol kinase 2, [RH, Score=489, Expect=4e-168]} {Mouse: ENSMUSG00000025059, Gk, glycerol kinase, [RH, Score=512, Expect=3e-177]; ENSMUSG00000053624, Gykl1, glycerol kinase-like 1, [RH, Score=493, Expect=7e-170]; ENSMUSG00000050553, Gk2, glycerol kinase 2, [RH, Score=490, Expect=8e-169]} {Dmel: FBgn0025592, Gk1, Glycerol kinase 1, [RH, Score=521, Expect=0.0]} {Celegans: WBGene00020007, R11F4.1, Probable glycerol kinase, [RH, Score=501, Expect=5e-174]} {Smed: dd_Smed_v6_3739_0_2, dd_Smed_v6_3739_0_2, [RH, Score=463, Expect=2e-159]} {RNA1509_6526} {RNA1310_9218, RNA1509_6526} {RNA1509_6526, RNA815_5702} Mlig455_041582 {REF} {Length: 3595} {TRANSSPLICED} {Pfam: FGGY family of carbohydrate kinases, N-terminal domain [PF00370.23, score=226.0]; FGGY family of carbohydrate kinases, C-terminal domain [PF02782.18, score=186.1]} {Human: ENSG00000229894, GK3P, glycerol kinase 3 pseudogene, [RH, Score=504, Expect=6e-174]; ENSG00000198814, GK, glycerol kinase, [RH, Score=502, Expect=4e-173]; ENSG00000196475, GK2, glycerol kinase 2, [RH, Score=487, Expect=2e-167]} {Mouse: ENSMUSG00000025059, Gk, glycerol kinase, [RH, Score=510, Expect=2e-176]; ENSMUSG00000053624, Gykl1, glycerol kinase-like 1, [RH, Score=490, Expect=5e-169]; ENSMUSG00000050553, Gk2, glycerol kinase 2, [RH, Score=488, Expect=5e-168]} {Dmel: FBgn0025592, Gk1, Glycerol kinase 1, [RH, Score=519, Expect=2e-180]} {Celegans: WBGene00020007, R11F4.1, Probable glycerol kinase, [RH, Score=503, Expect=9e-175]} {Smed: dd_Smed_v6_3739_0_2, dd_Smed_v6_3739_0_2, [RH, Score=462, Expect=1e-158]} {RNA1509_6526} {RNA1310_9218} {RNA815_5702} |
| 12. | MligTC455_23089 | 52 | 1.08 | Mlig455_010354 | Neo: - Age: - |
MAP2K6 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_010354 {REF} {Length: 3223} {Pfam: Protein kinase domain [PF00069.27, score=150.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=100.3]} {Human: ENSG00000108984, MAP2K6, mitogen-activated protein kinase kinase 6, [Score=226, Expect=2e-68]; ENSG00000034152, MAP2K3, mitogen-activated protein kinase kinase 3, [Score=219, Expect=9e-66]} {Mouse: ENSMUSG00000020623, Map2k6, mitogen-activated protein kinase kinase 6, [Score=225, Expect=2e-68]; ENSMUSG00000018932, Map2k3, mitogen-activated protein kinase kinase 3, [Score=220, Expect=4e-66]} {Dmel: FBgn0261524, lic, licorne, [Score=219, Expect=4e-66]} {Celegans: WBGene00004758, sek-1, Dual specificity mitogen-activated protein kinase kinase sek-1, [Score=221, Expect=6e-67]} {Smed: dd_Smed_v6_2106_0_1, dd_Smed_v6_2106_0_1, [Score=223, Expect=1e-67]} {RNA1509_26913} {RNA1310_12216.1} {RNA815_21995} |
| 13. | MligTC455_41422 | 158 | 3.3 | Mlig455_008530 | Neo: - Age: Up-Down-Up |
BBS4 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_008530 {REF} {Length: 2865} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=131.8]; Tetratricopeptide repeat [PF00515.30, score=117.7]; Tetratricopeptide repeat [PF13181.8, score=99.9]; TPR repeat [PF13414.8, score=73.7]; Tetratricopeptide repeat [PF14559.8, score=66.5]; Tetratricopeptide repeat [PF13371.8, score=62.3]; Tetratricopeptide repeat [PF13432.8, score=60.0]; Tetratricopeptide repeat [PF13428.8, score=59.6]; Tetratricopeptide repeat [PF13424.8, score=57.6]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=49.8]; Tetratricopeptide repeat [PF13176.8, score=46.5]; Tetratricopeptide repeat [PF13431.8, score=40.4]; Tetratricopeptide repeat [PF13174.8, score=39.9]; Tetratricopeptide repeat [PF14561.8, score=25.0]; Coatomer epsilon subunit [PF04733.16, score=22.6]; Tetratricopeptide repeat [PF13429.8, score=22.0]; Protein kinase G tetratricopeptide repeat [PF16918.7, score=21.4]; Bacterial type III secretion protein (HrpB1_HrpK) [PF09613.12, score=18.5]} {Human: ENSG00000140463, BBS4, Bardet-Biedl syndrome 4, [RH, Score=498, Expect=6e-172]} {Mouse: ENSMUSG00000025235, Bbs4, Bardet-Biedl syndrome 4 (human), [RH, Score=491, Expect=3e-169]} {Dmel: FBgn0033578, BBS4, Bardet-Biedl syndrome 4, [RH, Score=253, Expect=4e-77]} {Celegans: WBGene00043992, bbs-4, Bardet-Biedl syndrome 4 protein homolog, [RH, Score=206, Expect=5e-60]} {Smed: dd_Smed_v6_11370_0_1, dd_Smed_v6_11370_0_1, [RH, Score=445, Expect=6e-152]} {RNA1509_10669} {RNA1310_19623.1} {RNA815_1541.1} |
| 14. | MligTC455_53889 | 725 | 15.11 | Mlig455_035991 | Neo: - |
MOCS2 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_035991 {REF} {Length: 777} {TRANSSPLICED} {Pfam: ThiS family [PF02597.22, score=43.2]} {Human: ENSG00000164172, MOCS2, molybdenum cofactor synthesis 2, [RH, Score=59.7, Expect=7e-13]} {Mouse: ENSMUSG00000015536, Mocs2, molybdenum cofactor synthesis 2, [RH, Score=58.2, Expect=2e-12]} {Dmel: FBgn0260229, CG42503, [RH, Score=52.8, Expect=2e-10]} {Celegans: WBGene00019633, K10D2.7, Molybdopterin synthase sulfur carrier subunit, [RH, Score=50.8, Expect=7e-10]} {RNA1509_50624} {RNA1310_41655.1} {RNA815_20141} |
| 15. | MligTC455_22124 | 355 | 7.39 | Mlig455_001823 | Neo: - Age: Down-Up-Down Region-enriched R4: 1.871/0.04227 |
SNX8 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_001823 {REF} {Length: 3028} {TRANSSPLICED} {Pfam: PX domain [PF00787.26, score=54.7]} {Human: ENSG00000106266, SNX8, sorting nexin 8, [RH, Score=193, Expect=1e-54]} {Mouse: ENSMUSG00000029560, Snx8, sorting nexin 8, [RH, Score=196, Expect=7e-56]} {Smed: dd_Smed_v6_7087_0_1, dd_Smed_v6_7087_0_1, [Score=58.5, Expect=5e-09]} {RNA1509_13978} {RNA1310_8229} {RNA815_15810} |
| 16. | MligTC455_45646 | 1265 | 26.36 | Mlig455_057121, Mlig455_069297 | Neo: - Age: - Region-enriched R4: 1.525/0.00499 |
PLEKHF2 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_057121 {REF} {Length: 2756} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=71.7]; PH domain [PF00169.31, score=34.2]; PH domain [PF14593.8, score=21.3]} {Human: ENSG00000175895, PLEKHF2, pleckstrin homology and FYVE domain containing 2, [RH, Score=221, Expect=8e-72]} {Mouse: ENSMUSG00000049969, Plekhf2, pleckstrin homology domain containing, family F (with FYVE domain) member 2, [RH, Score=220, Expect=1e-71]} {Dmel: FBgn0025381, rush, rush hour, [RH, Score=209, Expect=1e-66]} {Celegans: WBGene00014019, ZK632.12, [RH, Score=206, Expect=4e-66]} {Smed: dd_Smed_v6_6176_1_1, dd_Smed_v6_6176_1_1, [RH, Score=189, Expect=2e-59]} {RNA1509_20229} {RNA1310_12913.1} {RNA815_8773} Mlig455_069297 {REF} {Length: 2751} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=71.7]; PH domain [PF00169.31, score=34.2]; PH domain [PF14593.8, score=21.3]} {Human: ENSG00000175895, PLEKHF2, pleckstrin homology and FYVE domain containing 2, [RH, Score=221, Expect=8e-72]} {Mouse: ENSMUSG00000049969, Plekhf2, pleckstrin homology domain containing, family F (with FYVE domain) member 2, [RH, Score=220, Expect=1e-71]} {Dmel: FBgn0025381, rush, rush hour, [RH, Score=209, Expect=1e-66]} {Celegans: WBGene00014019, ZK632.12, [RH, Score=206, Expect=4e-66]} {Smed: dd_Smed_v6_6176_1_1, dd_Smed_v6_6176_1_1, [RH, Score=189, Expect=2e-59]} {RNA1509_20229, RNA1509_35179, RNA1509_35502, RNA1509_54131, RNA1509_56862} {RNA1310_12913.1, RNA1509_20229, RNA1509_35179, RNA1509_35502, RNA1509_54131, RNA1509_56862} {RNA1509_20229, RNA1509_35179, RNA1509_35502, RNA1509_54131, RNA1509_56862, RNA815_8773} |
| 17. | MligTC455_42897 | 162 | 3.37 | Mlig455_048920 | Neo: - Age: - |
RANGAP1 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_048920 {REF} {Length: 3370} {TRANSSPLICED} {Pfam: Leucine Rich repeat [PF13516.8, score=60.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=34.1]; Leucine rich repeat [PF13855.8, score=28.7]; Leucine Rich Repeat [PF00560.35, score=19.6]} {Human: ENSG00000100401, RANGAP1, Ran GTPase activating protein 1, [RH, Score=229, Expect=4e-66]} {Mouse: ENSMUSG00000022391, Rangap1, RAN GTPase activating protein 1, [RH, Score=232, Expect=3e-67]} {Dmel: FBgn0003346, RanGAP, Ran GTPase activating protein, [RH, Score=231, Expect=8e-67]} {Celegans: WBGene00004303, ran-2, Ran GTPase-activating protein 2, [RH, Score=202, Expect=1e-54]} {Smed: dd_Smed_v6_7553_0_1, dd_Smed_v6_7553_0_1, [RH, Score=248, Expect=2e-72]} {RNA1509_13509, RNA1509_25800, RNA1509_56275} {RNA1310_6885, RNA1509_13509, RNA1509_25800, RNA1509_56275} {RNA1509_13509, RNA1509_25800, RNA1509_56275, RNA815_9884} |