TomoSeq data search

Data search

Results for MligTC455_43540

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43540

65

1.36

Mlig455_063604

Neo: -

Age: -

Mlig455_063604 {REF} {Length: 1048} {NoTransDecoderORF} {RNA1509_52081} {RNA1310_2648.1} {RNA815_12987}

Cumulative graph for MligTC455_43540

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.067	1.601	0.99964	1.00000
RegionR2	1.425	1.601	0.24593	0.62274
RegionR3	0.418	1.601	0.53356	1.00000
RegionR4	3.146	1.601	0.02602	0.12282
RegionR5	2.798	1.601	0.02005	0.09727
RegionR6	-2.279	1.601	0.99969	1.00000
RegionR7	-2.258	1.601	0.99973	1.00000
RegionR8	-1.183	1.601	0.99975	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.727	1.601	0.99998	1.00000
RegenerationR2	-0.256	1.601	0.71302	0.96081
RegenerationR3	1.081	1.601	0.37124	0.78452
RegenerationR4	0.042	1.601	0.96240	1.00000
RegenerationR5	0.257	1.601	0.83992	1.00000
RegenerationR6	4.395	1.601	0.00767	0.10732
RegenerationBL	3.186	1.601	0.08865	0.34890
RegenerationTP	2.879	1.601	0.27318	0.72144

Genes with expression patterns similar to MligTC455_43540

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43540	65	1.36	Mlig455_063604	Neo: - Age: -		4	-	-	1.000	1.000	1.000	1.000	Mlig455_063604 {REF} {Length: 1048} {NoTransDecoderORF} {RNA1509_52081} {RNA1310_2648.1} {RNA815_12987}
2.	MligTC455_27063	74	1.54	Mlig455_019209	Neo: - Age: -		1.76	-	-	0.980	-	-	0.780	Mlig455_019209 {REF} {Length: 481} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_99471} {RNA815_64986}
3.	MligTC455_27080	48	1	Mlig455_061810	Neo: - Age: -		1.725	-	-	0.956	-	-	0.769	Mlig455_061810 {REF} {Length: 665} {RNA1509_44223} {RNA1310_99471} {RNA815_64986}
4.	MligTC455_16724	211	4.4	Mlig455_055966	Neo: - Age: Up-Down-Up	PTEN	0.985	-	-	0.985	-	-	-	Mlig455_055966 {REF} {Length: 4096} {TRANSSPLICED} {Pfam: C2 domain of PTEN tumour-suppressor protein [PF10409.11, score=72.2]} {Human: ENSG00000284792, PTEN, phosphatase and tensin homolog, [Score=265, Expect=1e-81]; ENSG00000171862, PTEN, phosphatase and tensin homolog, [Score=262, Expect=9e-83]} {Mouse: ENSMUSG00000013663, Pten, phosphatase and tensin homolog, [Score=262, Expect=6e-83]} {Dmel: FBgn0026379, Pten, Phosphatase and tensin homolog, [Score=214, Expect=3e-64]} {Celegans: WBGene00000913, daf-18, Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase daf-18, [Score=147, Expect=1e-37]} {Smed: dd_Smed_v6_7478_0_1, dd_Smed_v6_7478_0_1, [RH, Score=225, Expect=6e-69]} {RNA1509_17397} {RNA1310_7531.2} {RNA815_4064}
5.	MligTC455_44647	489	10.19	Mlig455_006279	Neo: - Age: -	OXSR1	0.971	-	-	-	-	-	0.971	Mlig455_006279 {REF} {Length: 2340} {Pfam: Protein kinase domain [PF00069.27, score=128.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=97.0]; Phosphotransferase enzyme family [PF01636.25, score=18.9]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=18.9]; Fungal protein kinase [PF17667.3, score=18.8]} {Human: ENSG00000172939, OXSR1, oxidative stress responsive 1, [Score=89.7, Expect=2e-18]; ENSG00000091436, MAP3K20, mitogen-activated protein kinase kinase kinase 20, [Score=87.0, Expect=1e-17]; ENSG00000135341, MAP3K7, mitogen-activated protein kinase kinase kinase 7, [Score=85.5, Expect=4e-17]} {Mouse: ENSMUSG00000036737, Oxsr1, oxidative-stress responsive 1, [Score=89.7, Expect=1e-18]; ENSMUSG00000028284, Map3k7, mitogen-activated protein kinase kinase kinase 7, [Score=85.5, Expect=3e-17]} {Dmel: FBgn0046689, Takl1, Tak1-like 1, [Score=86.7, Expect=4e-18]} {Celegans: WBGene00006971, zak-1, Mammalian ZAK kinase homolog, [Score=82.0, Expect=3e-16]} {Smed: dd_Smed_v6_2589_0_2, dd_Smed_v6_2589_0_2, [Score=100, Expect=1e-22]} {RNA1509_40362, RNA1509_48119, RNA1509_54731} {RNA1310_1875.2, RNA1509_40362, RNA1509_48119, RNA1509_54731} {RNA1509_40362, RNA1509_48119, RNA1509_54731, RNA815_820}
6.	MligTC455_29856	28	0.58	Mlig455_049392	Neo: - Age: -		0.969	-	-	-	-	-	0.969	Mlig455_049392 {REF} {Length: 1144} {TRANSSPLICED} {RNA1509_20954} {RNA1310_33964.1} {RNA815_10226}
7.	MligTC455_31534	428	8.92	Mlig455_057376, Mlig455_057399	Neo: - Age: -		0.965	-	-	-	-	-	0.965	Mlig455_057376 {REF} {Length: 3077} {Pfam: NAD dependent epimerase/dehydratase family [PF01370.23, score=59.1]; GDP-mannose 4,6 dehydratase [PF16363.7, score=28.8]; RmlD substrate binding domain [PF04321.19, score=19.8]; NAD(P)H-binding [PF13460.8, score=18.6]} {RNA1509_55612} {RNA1310_5934} {RNA815_15007} Mlig455_057399 {REF} {Length: 3189} {Pfam: NAD dependent epimerase/dehydratase family [PF01370.23, score=59.1]; GDP-mannose 4,6 dehydratase [PF16363.7, score=28.8]; RmlD substrate binding domain [PF04321.19, score=19.8]; NAD(P)H-binding [PF13460.8, score=18.6]} {RNA1509_55612} {RNA1310_5934} {RNA815_15007}
8.	MligTC455_10554	573	11.93	Mlig455_037747, Mlig455_069922	Neo: - Age: - Regeneration-depleted BL: -4.357 Regeneration-depleted R6: -4.209 Regeneration-depleted R3: -4.000 Regeneration-depleted R2: -3.924 Regeneration-depleted R5: -3.923 Regeneration-depleted R4: -3.811		0.963	-	-	-	-	-	0.963	Mlig455_037747 {REF} {Length: 601} {RNA1509_11182} {RNA1310_30933} {RNA815_1577.1} Mlig455_069922 {REF} {Length: 929} {RNA1509_11182} {RNA1310_9907, RNA1509_11182} {RNA1509_11182, RNA815_1577.1}
9.	MligTC455_53818	33	0.68	Mlig455_032319	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_032319 {REF} {Length: 2522} {NoTransDecoderORF} {RNA1509_55284} {RNA1310_68525} {RNA815_47119}
10.	MligTC455_53734	59	1.23	Mlig455_055711	Neo: - Age: -		0.96	-	-	-	-	-	0.960	Mlig455_055711 {REF} {Length: 2272} {RNA1509_48475} {RNA1310_18466} {RNA815_22605}
11.	MligTC455_17377	32	0.67	Mlig455_041286	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_041286 {REF} {Length: 912} {NoTransDecoderORF} {RNA1310_106511}
12.	MligTC455_16725	225	4.69	Mlig455_056078	Neo: - Age: Up-Down-Down	PTEN	0.956	-	-	0.956	-	-	-	Mlig455_056078 {REF} {Length: 4586} {TRANSSPLICED} {Pfam: C2 domain of PTEN tumour-suppressor protein [PF10409.11, score=72.2]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=22.7]; Protein-tyrosine phosphatase [PF00102.29, score=18.5]} {Human: ENSG00000284792, PTEN, phosphatase and tensin homolog, [Score=269, Expect=2e-83]; ENSG00000171862, PTEN, phosphatase and tensin homolog, [Score=266, Expect=2e-84]} {Mouse: ENSMUSG00000013663, Pten, phosphatase and tensin homolog, [Score=266, Expect=1e-84]} {Dmel: FBgn0026379, Pten, Phosphatase and tensin homolog, [Score=219, Expect=2e-66]} {Celegans: WBGene00000913, daf-18, Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase daf-18, [Score=150, Expect=5e-39]} {Smed: dd_Smed_v6_7478_0_1, dd_Smed_v6_7478_0_1, [RH, Score=230, Expect=5e-71]} {RNA1509_17397} {RNA1310_7531.2, RNA1509_17397} {RNA1509_17397, RNA815_4064}
13.	MligTC455_25374	428	8.91	Mlig455_036389, Mlig455_036390, Mlig455_036391, Mlig455_054557	Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.690 Regeneration-upregulated BL: 5.459 Regeneration-enriched BL: 5.459		0.955	-	-	-	-	-	0.955	Mlig455_036389 {REF} {Length: 860} {NoTransDecoderORF} {RNA1509_40044} {RNA1310_33232} {RNA815_16463} Mlig455_036390 {REF} {Length: 5024} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1} Mlig455_036391 {REF} {Length: 3445} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1} Mlig455_054557 {REF} {Length: 6330} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1}
14.	MligTC455_13456	43	0.89	Mlig455_065240	Neo: - Age: -	ARRDC3	0.953	-	-	-	-	-	0.953	Mlig455_065240 {REF} {Length: 1385} {TRANSSPLICED} {Pfam: Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=64.6]; Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=54.7]} {Human: ENSG00000113369, ARRDC3, arrestin domain containing 3, [Score=81.6, Expect=2e-17]} {Mouse: ENSMUSG00000074794, Arrdc3, arrestin domain containing 3, [Score=81.6, Expect=1e-17]} {Dmel: FBgn0037465, CG1105, [Score=95.5, Expect=1e-22]} {Celegans: WBGene00012467, arrd-8, ARRestin Domain protein, [Score=83.6, Expect=9e-19]} {RNA1310_40788} {RNA815_61509}
15.	MligTC455_10321	235	4.89	Mlig455_004945, Mlig455_035629, Mlig455_055310	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_004945 {REF} {Length: 80} {NoTransDecoderORF} {RNA1509_52583} {RNA1310_6592} {RNA815_13363} Mlig455_035629 {REF} {Length: 143} {NoTransDecoderORF} {RNA1509_52583} {RNA1310_6592} {RNA815_13363} Mlig455_055310 {REF} {Length: 2978} {RNA1509_52583} {RNA1310_43983.1} {RNA815_13363}
16.	MligTC455_16110	263	5.48	Mlig455_057916, Mlig455_057943	Neo: - Age: -	UNC5C	0.952	-	-	-	-	-	0.952	Mlig455_057916 {REF} {Length: 4970} {Pfam: UPA domain [PF17217.5, score=112.3]; ZU5 domain [PF00791.22, score=75.9]; Immunoglobulin domain [PF13927.8, score=44.4]; Immunoglobulin I-set domain [PF07679.18, score=36.4]; Immunoglobulin domain [PF13895.8, score=33.4]; Death domain [PF00531.24, score=33.1]; Immunoglobulin domain [PF00047.27, score=29.6]} {Human: ENSG00000182168, UNC5C, unc-5 netrin receptor C, [Score=240, Expect=2e-66]} {Mouse: ENSMUSG00000059921, Unc5c, unc-5 netrin receptor C, [Score=239, Expect=3e-65]} {Dmel: FBgn0034013, unc-5, [Score=122, Expect=6e-28]} {Celegans: WBGene00006745, unc-5, Netrin receptor unc-5, [Score=149, Expect=2e-36]} {Smed: dd_Smed_v6_10380_0_2, dd_Smed_v6_10380_0_2, [Score=258, Expect=1e-71]} {RNA1509_57093} {RNA1310_9892} {RNA815_16193} Mlig455_057943 {REF} {Length: 4020} {Pfam: UPA domain [PF17217.5, score=112.3]; ZU5 domain [PF00791.22, score=75.9]; Immunoglobulin domain [PF13927.8, score=44.4]; Immunoglobulin I-set domain [PF07679.18, score=36.4]; Immunoglobulin domain [PF13895.8, score=33.4]; Death domain [PF00531.24, score=33.1]; Immunoglobulin domain [PF00047.27, score=29.6]} {Human: ENSG00000182168, UNC5C, unc-5 netrin receptor C, [Score=240, Expect=2e-66]} {Mouse: ENSMUSG00000059921, Unc5c, unc-5 netrin receptor C, [Score=239, Expect=3e-65]} {Dmel: FBgn0034013, unc-5, [Score=122, Expect=6e-28]} {Celegans: WBGene00006745, unc-5, Netrin receptor unc-5, [Score=149, Expect=2e-36]} {Smed: dd_Smed_v6_10380_0_2, dd_Smed_v6_10380_0_2, [Score=258, Expect=1e-71]} {RNA1509_57093} {RNA1310_9892} {RNA815_16193}
17.	MligTC455_36185	71	1.48	Mlig455_035985	Neo: - Age: -	KCNH7	0.952	-	-	-	-	-	0.952	Mlig455_035985 {REF} {Length: 3355} {Pfam: Ion transport protein [PF00520.33, score=118.6]; Ion channel [PF07885.18, score=46.2]; PAS domain [PF13426.9, score=44.5]; Cyclic nucleotide-binding domain [PF00027.31, score=43.8]; PAS fold [PF00989.27, score=22.5]; PAS fold [PF08447.14, score=21.9]} {Human: ENSG00000184611, KCNH7, potassium voltage-gated channel subfamily H member 7, [Score=795, Expect=0.0]; ENSG00000173826, KCNH6, potassium voltage-gated channel subfamily H member 6, [Score=786, Expect=0.0]; ENSG00000055118, KCNH2, potassium voltage-gated channel subfamily H member 2, [Score=773, Expect=0.0]} {Mouse: ENSMUSG00000059742, Kcnh7, potassium voltage-gated channel, subfamily H (eag-related), member 7, [Score=795, Expect=0.0]; ENSMUSG00000001901, Kcnh6, potassium voltage-gated channel, subfamily H (eag-related), member 6, [Score=794, Expect=0.0]; ENSMUSG00000038319, Kcnh2, potassium voltage-gated channel, subfamily H (eag-related), member 2, [Score=774, Expect=0.0]} {Dmel: FBgn0003353, sei, seizure, [Score=741, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [Score=714, Expect=0.0]} {Smed: dd_Smed_v6_12621_0_1, dd_Smed_v6_12621_0_1, [Score=775, Expect=0.0]} {RNA1509_16542} {RNA1310_5129.1} {RNA815_4089.1}
18.	MligTC455_44648	177	3.69	Mlig455_013655	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_013655 {REF} {Length: 2045} {Pfam: Protein kinase domain [PF00069.27, score=24.6]} {RNA1509_54731} {RNA1310_1875.2} {RNA815_820}
19.	MligTC455_27161	124	2.57	Mlig455_042313, Mlig455_042318	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_042313 {REF} {Length: 232} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_80.1} Mlig455_042318 {REF} {Length: 232} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_80.1}

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