TomoSeq data search

Data search

Results for MligTC455_43651

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43651

2083

43.40

Mlig455_005311

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.329

TMOD3

Mlig455_005311 {REF} {Length: 2334} {TRANSSPLICED} {Pfam: Tropomodulin [PF03250.16, score=185.9]} {Human: ENSG00000138594, TMOD3, tropomodulin 3, [RH, Score=224, Expect=4e-70]; ENSG00000128872, TMOD2, tropomodulin 2, [RH, Score=214, Expect=2e-66]} {Mouse: ENSMUSG00000058587, Tmod3, tropomodulin 3, [RH, Score=221, Expect=4e-69]; ENSMUSG00000032186, Tmod2, tropomodulin 2, [RH, Score=213, Expect=4e-66]; ENSMUSG00000028328, Tmod1, tropomodulin 1, [RH, Score=213, Expect=4e-66]} {Dmel: FBgn0082582, tmod, tropomodulin, [RH, Score=273, Expect=1e-87]} {Celegans: WBGene00006823, unc-94, Tropomodulin, [RH, Score=247, Expect=6e-79]} {Smed: dd_Smed_v6_3279_0_1, dd_Smed_v6_3279_0_1, [RH, Score=322, Expect=8e-109]} {RNA1509_1524, RNA1509_28172, RNA1509_37888, RNA1509_48993, RNA1509_52065} {RNA1310_10808.2, RNA1509_1524, RNA1509_28172, RNA1509_37888, RNA1509_48993, RNA1509_52065} {RNA1509_1524, RNA1509_28172, RNA1509_37888, RNA1509_48993, RNA1509_52065, RNA815_3504.1}

Cumulative graph for MligTC455_43651

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.875	5.59	0.16588	0.78980
RegionR2	0.375	5.59	0.19913	0.55912
RegionR3	0.513	5.59	0.01883	0.22858
RegionR4	-0.406	5.59	0.14354	0.38865
RegionR5	0.31	5.59	0.12643	0.35898
RegionR6	0.604	5.59	0.00707	0.13547
RegionR7	-0.189	5.59	0.51631	1.00000
RegionR8	-0.331	5.59	0.35717	0.99172

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.302	5.59	0.15010	0.89129
RegenerationR2	0.101	5.59	0.69199	0.95365
RegenerationR3	-0.068	5.59	0.80703	0.98417
RegenerationR4	0.1	5.59	0.72711	0.96368
RegenerationR5	0.042	5.59	0.86603	1.00000
RegenerationR6	0.156	5.59	0.56165	0.84658
RegenerationBL	0.492	5.59	0.13676	0.44060
RegenerationTP	0.13	5.59	0.72564	1.00000

Genes with expression patterns similar to MligTC455_43651

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43651	2083	43.4	Mlig455_005311	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.329	TMOD3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_005311 {REF} {Length: 2334} {TRANSSPLICED} {Pfam: Tropomodulin [PF03250.16, score=185.9]} {Human: ENSG00000138594, TMOD3, tropomodulin 3, [RH, Score=224, Expect=4e-70]; ENSG00000128872, TMOD2, tropomodulin 2, [RH, Score=214, Expect=2e-66]} {Mouse: ENSMUSG00000058587, Tmod3, tropomodulin 3, [RH, Score=221, Expect=4e-69]; ENSMUSG00000032186, Tmod2, tropomodulin 2, [RH, Score=213, Expect=4e-66]; ENSMUSG00000028328, Tmod1, tropomodulin 1, [RH, Score=213, Expect=4e-66]} {Dmel: FBgn0082582, tmod, tropomodulin, [RH, Score=273, Expect=1e-87]} {Celegans: WBGene00006823, unc-94, Tropomodulin, [RH, Score=247, Expect=6e-79]} {Smed: dd_Smed_v6_3279_0_1, dd_Smed_v6_3279_0_1, [RH, Score=322, Expect=8e-109]} {RNA1509_1524, RNA1509_28172, RNA1509_37888, RNA1509_48993, RNA1509_52065} {RNA1310_10808.2, RNA1509_1524, RNA1509_28172, RNA1509_37888, RNA1509_48993, RNA1509_52065} {RNA1509_1524, RNA1509_28172, RNA1509_37888, RNA1509_48993, RNA1509_52065, RNA815_3504.1}
2.	MligTC455_43652	2107	43.9	Mlig455_029978	Neo: - Age: -	TMOD3	5.983	0.999	0.999	0.999	0.993	0.994	0.999	Mlig455_029978 {REF} {Length: 2972} {TRANSSPLICED} {Pfam: Tropomodulin [PF03250.16, score=185.9]} {Human: ENSG00000138594, TMOD3, tropomodulin 3, [RH, Score=224, Expect=4e-70]; ENSG00000128872, TMOD2, tropomodulin 2, [RH, Score=214, Expect=2e-66]} {Mouse: ENSMUSG00000058587, Tmod3, tropomodulin 3, [RH, Score=221, Expect=4e-69]; ENSMUSG00000032186, Tmod2, tropomodulin 2, [RH, Score=213, Expect=4e-66]; ENSMUSG00000028328, Tmod1, tropomodulin 1, [RH, Score=213, Expect=4e-66]} {Dmel: FBgn0082582, tmod, tropomodulin, [RH, Score=273, Expect=1e-87]} {Celegans: WBGene00006823, unc-94, Tropomodulin, [RH, Score=247, Expect=6e-79]} {Smed: dd_Smed_v6_3279_0_1, dd_Smed_v6_3279_0_1, [RH, Score=322, Expect=8e-109]} {RNA1509_1524, RNA1509_29918, RNA1509_52135, RNA1509_7985} {RNA1310_10808.2, RNA1509_29918, RNA1509_52135, RNA1509_7985} {RNA1509_29918, RNA1509_52135, RNA1509_7985, RNA815_3504.1}
3.	MligTC455_16784	1482	30.87	Mlig455_045891	Neo: Neoblast Age: - Regeneration-enriched R6: 1.382	TIMM10	1.711	-	-	0.748	0.963	-	-	Mlig455_045891 {REF} {Length: 2072} {TRANSSPLICED} {Pfam: Tim10/DDP family zinc finger [PF02953.17, score=69.3]} {Human: ENSG00000134809, TIMM10, translocase of inner mitochondrial membrane 10, [RH, Score=88.2, Expect=1e-23]} {Mouse: ENSMUSG00000027076, Timm10, translocase of inner mitochondrial membrane 10, [RH, Score=88.2, Expect=7e-24]} {Dmel: FBgn0027360, Tim10, Translocase of inner membrane 10, [RH, Score=90.5, Expect=6e-25]} {Celegans: WBGene00006573, tin-10, Mitochondrial import inner membrane translocase subunit Tim10, [RH, Score=85.1, Expect=7e-23]} {Smed: dd_Smed_v6_1710_0_1, dd_Smed_v6_1710_0_1, [RH, Score=87.8, Expect=6e-24]} {RNA1509_15328, RNA1509_21842, RNA1509_24688, RNA1509_29092, RNA1509_29987, RNA1509_42814, RNA1509_46821} {RNA1310_45745, RNA1509_15328, RNA1509_21842, RNA1509_24688, RNA1509_29092, RNA1509_29987, RNA1509_42814, RNA1509_46821} {RNA1509_15328, RNA1509_21842, RNA1509_24688, RNA1509_29092, RNA1509_29987, RNA1509_42814, RNA1509_46821, RNA815_24837.1}
4.	MligTC455_39285	503	10.48	Mlig455_026954	Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 2.273/0.00002		1.703	-	-	0.751	0.952	-	-	Mlig455_026954 {REF} {Length: 2234} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25432} {RNA1310_22232} {RNA815_10193}
5.	MligTC455_52611	2214	46.12	Mlig455_069407	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.448 Region-enriched R5: 1.005/0.00000	PA2G4	0.974	-	-	-	0.974	-	-	Mlig455_069407 {REF} {Length: 3169} {Pfam: Metallopeptidase family M24 [PF00557.26, score=72.2]} {Human: ENSG00000170515, PA2G4, proliferation-associated 2G4, [RH, Score=416, Expect=3e-144]} {Mouse: ENSMUSG00000025364, Pa2g4, proliferation-associated 2G4, [RH, Score=420, Expect=7e-146]} {Dmel: FBgn0035630, CG10576, [RH, Score=385, Expect=3e-132]} {Celegans: WBGene00021088, W08E12.7, [RH, Score=345, Expect=4e-117]} {Smed: dd_Smed_v6_2102_0_1, dd_Smed_v6_2102_0_1, [RH, Score=355, Expect=4e-121]} {RNA1509_21937} {RNA1310_16489.1, RNA1509_21937} {RNA1509_21937, RNA815_7518}
6.	MligTC455_28167	889	18.53	Mlig455_041562	Neo: Int S/G2/M Age: logFC(26M/2M)=0.271 Region-enriched R5: 1.459/0.00003 Region-enriched R4: 1.099/0.04929	DDX60	0.969	-	-	-	0.969	-	-	Mlig455_041562 {REF} {Length: 6838} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=61.6]; Type III restriction enzyme, res subunit [PF04851.17, score=45.6]; Helicase conserved C-terminal domain [PF00271.33, score=33.2]; Zinc finger, ZZ type [PF00569.19, score=25.6]} {Human: ENSG00000137628, DDX60, DExD/H-box helicase 60, [RH, Score=639, Expect=0.0]} {Mouse: ENSMUSG00000037921, Ddx60, DEAD (Asp-Glu-Ala-Asp) box polypeptide 60, [RH, Score=618, Expect=0.0]} {Dmel: FBgn0039117, tst, twister, [Score=84.7, Expect=5e-16]} {Celegans: WBGene00016194, C28H8.3, Uncharacterized helicase C28H8.3, [RH, Score=403, Expect=6e-116]} {Smed: dd_Smed_v6_10069_0_1, dd_Smed_v6_10069_0_1, [Score=84.7, Expect=3e-16]} {RNA1509_25102, RNA1509_2815} {RNA1310_707, RNA1509_25102, RNA1509_2815} {RNA1509_25102, RNA1509_2815, RNA815_269.1}
7.	MligTC455_52610	2169	45.19	Mlig455_008639	Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.168 Region-enriched R5: 1.020/0.00000	PA2G4	0.963	-	-	-	0.963	-	-	Mlig455_008639 {REF} {Length: 3279} {Pfam: Metallopeptidase family M24 [PF00557.26, score=72.2]} {Human: ENSG00000170515, PA2G4, proliferation-associated 2G4, [RH, Score=416, Expect=3e-144]} {Mouse: ENSMUSG00000025364, Pa2g4, proliferation-associated 2G4, [RH, Score=420, Expect=7e-146]} {Dmel: FBgn0035630, CG10576, [RH, Score=385, Expect=3e-132]} {Celegans: WBGene00021088, W08E12.7, [RH, Score=345, Expect=4e-117]} {Smed: dd_Smed_v6_2102_0_1, dd_Smed_v6_2102_0_1, [RH, Score=355, Expect=4e-121]} {RNA1509_21937} {RNA1310_16489.1} {RNA815_7518}
8.	MligTC455_47837	482	10.04	Mlig455_031756	Neo: - Age: -		0.958	-	-	-	0.958	-	-	Mlig455_031756 {REF} {Length: 1149} {TRANSSPLICED} {Pfam: Det1 complexing ubiquitin ligase [PF10172.11, score=34.3]} {RNA1509_59609} {RNA1310_29699} {RNA815_39284.1}
9.	MligTC455_36979	659	13.73	Mlig455_038265	Neo: - Age: -	SPTLC1	0.957	-	-	-	0.957	-	-	Mlig455_038265 {REF} {Length: 3665} {TRANSSPLICED} {Pfam: Aminotransferase class I and II [PF00155.23, score=135.4]} {Human: ENSG00000090054, SPTLC1, serine palmitoyltransferase long chain base subunit 1, [RH, Score=416, Expect=2e-141]} {Mouse: ENSMUSG00000021468, Sptlc1, serine palmitoyltransferase, long chain base subunit 1, [RH, Score=431, Expect=9e-148]} {Dmel: FBgn0086532, Spt-I, Serine palmitoyltransferase subunit I, [RH, Score=396, Expect=3e-134]} {Celegans: WBGene00016020, sptl-1, Serine palmitoyltransferase 1, [RH, Score=421, Expect=6e-144]} {Smed: dd_Smed_v6_1567_0_1, dd_Smed_v6_1567_0_1, [RH, Score=458, Expect=1e-158]} {RNA1509_11888} {RNA1310_18923, RNA1509_11888} {RNA1509_11888, RNA815_5056}
10.	MligTC455_48111	1192	24.84	Mlig455_003138	Neo: Int S/G2/M Age: -	CNOT7	0.952	-	-	0.952	-	-	-	Mlig455_003138 {REF} {Length: 3134} {TRANSSPLICED} {Pfam: CAF1 family ribonuclease [PF04857.22, score=70.6]} {Human: ENSG00000198791, CNOT7, CCR4-NOT transcription complex subunit 7, [RH, Score=270, Expect=1e-89]; ENSG00000155508, CNOT8, CCR4-NOT transcription complex subunit 8, [RH, Score=266, Expect=6e-88]} {Mouse: ENSMUSG00000031601, Cnot7, CCR4-NOT transcription complex, subunit 7, [RH, Score=270, Expect=9e-90]; ENSMUSG00000020515, Cnot8, CCR4-NOT transcription complex, subunit 8, [RH, Score=266, Expect=4e-88]} {Dmel: FBgn0036239, Pop2, [RH, Score=277, Expect=2e-92]} {Celegans: WBGene00000369, ccf-1, CCR4-NOT transcription complex subunit 7, [RH, Score=189, Expect=4e-58]} {Smed: dd_Smed_v6_10225_0_1, dd_Smed_v6_10225_0_1, [RH, Score=266, Expect=2e-86]} {RNA1509_11515, RNA1509_15417, RNA1509_20534, RNA1509_35734, RNA1509_38866, RNA1509_53668} {RNA1310_20569.1, RNA1509_11515, RNA1509_15417, RNA1509_20534, RNA1509_35734, RNA1509_38866, RNA1509_53668} {RNA1509_11515, RNA1509_15417, RNA1509_20534, RNA1509_35734, RNA1509_38866, RNA1509_53668, RNA815_9569}

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