Data search
Results for MligTC455_43978
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_43978 | 1071 | 22.31 | Mlig455_029823 | Neo: Irradiation Age: logFC(26M/2M)=0.768 Region-enriched R5: 1.073/0.00005 |
GRAMD1A | Mlig455_029823 {REF} {Length: 3003} {Pfam: GRAM domain [PF02893.22, score=54.8]} {Human: ENSG00000089351, GRAMD1A, GRAM domain containing 1A, [Score=62.8, Expect=4e-10]; ENSG00000155324, GRAMD2B, GRAM domain containing 2B, [Score=62.8, Expect=3e-10]} {Mouse: ENSMUSG00000001700, Gramd3, GRAM domain containing 3, [Score=62.4, Expect=3e-10]; ENSMUSG00000001248, Gramd1a, GRAM domain containing 1A, [Score=60.5, Expect=1e-09]} {Smed: dd_Smed_v6_8544_1_3, dd_Smed_v6_8544_1_3, [Score=63.5, Expect=8e-12]} {RNA1509_12300, RNA1509_24303, RNA1509_25944, RNA1509_27569, RNA1509_35012} {RNA1310_19042, RNA1509_12300, RNA1509_24303, RNA1509_25944, RNA1509_27569, RNA1509_35012} {RNA1509_12300, RNA1509_24303, RNA1509_25944, RNA1509_27569, RNA1509_35012, RNA815_8450.1} |
Cumulative graph for MligTC455_43978
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.939 | 4.759 | 0.15966 | 0.77998 | |
| RegionR2 | -0.895 | 4.759 | 0.01123 | 0.10815 | |
| RegionR3 | -0.126 | 4.759 | 0.64168 | 1.00000 | |
| RegionR4 | 0.82 | 4.759 | 0.00707 | 0.04725 | |
| RegionR5 | 1.073 | 4.759 | 0.00000 | 0.00005 | |
| RegionR6 | 0.202 | 4.759 | 0.44875 | 1.00000 | |
| RegionR7 | -0.062 | 4.759 | 0.86074 | 1.00000 | |
| RegionR8 | -1.951 | 4.759 | 0.00056 | 0.03081 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -8.379 | 4.759 | 0.00496 | 0.35302 | |
| RegenerationR2 | -0.759 | 4.759 | 0.02869 | 0.27971 | |
| RegenerationR3 | -0.3 | 4.759 | 0.34451 | 0.76806 | |
| RegenerationR4 | -0.194 | 4.759 | 0.52037 | 0.87948 | |
| RegenerationR5 | -0.38 | 4.759 | 0.15256 | 0.57133 | |
| RegenerationR6 | -0.203 | 4.759 | 0.52414 | 0.82315 | |
| RegenerationBL | -0.512 | 4.759 | 0.32836 | 0.69467 | |
| RegenerationTP | 0.869 | 4.759 | 0.06511 | 0.41156 |
Genes with expression patterns similar to MligTC455_43978
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_43978 | 1071 | 22.31 | Mlig455_029823 | Neo: Irradiation Age: logFC(26M/2M)=0.768 Region-enriched R5: 1.073/0.00005 |
GRAMD1A | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_029823 {REF} {Length: 3003} {Pfam: GRAM domain [PF02893.22, score=54.8]} {Human: ENSG00000089351, GRAMD1A, GRAM domain containing 1A, [Score=62.8, Expect=4e-10]; ENSG00000155324, GRAMD2B, GRAM domain containing 2B, [Score=62.8, Expect=3e-10]} {Mouse: ENSMUSG00000001700, Gramd3, GRAM domain containing 3, [Score=62.4, Expect=3e-10]; ENSMUSG00000001248, Gramd1a, GRAM domain containing 1A, [Score=60.5, Expect=1e-09]} {Smed: dd_Smed_v6_8544_1_3, dd_Smed_v6_8544_1_3, [Score=63.5, Expect=8e-12]} {RNA1509_12300, RNA1509_24303, RNA1509_25944, RNA1509_27569, RNA1509_35012} {RNA1310_19042, RNA1509_12300, RNA1509_24303, RNA1509_25944, RNA1509_27569, RNA1509_35012} {RNA1509_12300, RNA1509_24303, RNA1509_25944, RNA1509_27569, RNA1509_35012, RNA815_8450.1} |
| 2. | MligTC455_21748 | 1136 | 23.66 | Mlig455_016190 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.022/0.00025 |
2.504 | 0.801 | - | - | - | 0.967 | 0.736 | Mlig455_016190 {REF} {Length: 2131} {TRANSSPLICED} {Smed: dd_Smed_v6_8469_0_1, dd_Smed_v6_8469_0_1, [RH, Score=67.4, Expect=1e-11]} {RNA1509_11127, RNA1509_19303} {RNA1310_11899, RNA1509_11127, RNA1509_19303} {RNA1509_11127, RNA1509_19303, RNA815_4343} | |
| 3. | MligTC455_36150 | 138 | 2.88 | Mlig455_069006 | Neo: - Age: - |
RTL1 | 1.737 | - | - | - | - | 0.958 | 0.779 | Mlig455_069006 {REF} {Length: 3820} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=52.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=42.5]; Aspartyl protease [PF13650.8, score=35.7]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=50.4, Expect=1e-05]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=159, Expect=1e-40]} {RNA1310_32537} {RNA815_54709} |
| 4. | MligTC455_36746 | 584 | 12.16 | Mlig455_010816 | Neo: - Age: - |
SMU1 | 0.974 | - | - | - | - | 0.974 | - | Mlig455_010816 {REF} {Length: 4670} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=125.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=65.4]; LisH-like dimerisation domain [PF17814.3, score=44.8]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=39.6]; Nucleoporin Nup120/160 [PF11715.10, score=33.1]} {Human: ENSG00000122692, SMU1, SMU1, DNA replication regulator and spliceosomal factor, [RH, Score=828, Expect=0.0]} {Mouse: ENSMUSG00000028409, Smu1, smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans), [RH, Score=828, Expect=0.0]} {Dmel: FBgn0038666, Smu1, Smu1 spliceosomal factor, [RH, Score=803, Expect=0.0]} {Celegans: WBGene00004895, smu-1, SMU-1; Suppressor of Mec and Unc defects, [RH, Score=667, Expect=0.0]} {Smed: dd_Smed_v6_3438_0_1, dd_Smed_v6_3438_0_1, [RH, Score=790, Expect=0.0]} {RNA1509_23947, RNA1509_35954} {RNA1310_16357, RNA1509_23947, RNA1509_35954} {RNA1509_23947, RNA1509_35954, RNA815_7592} |
| 5. | MligTC455_40027 | 2754 | 57.38 | Mlig455_004525 | Neo: - Age: - Regeneration-downregulated BL: -1.448 Regeneration-depleted BL: -1.448 |
0.971 | - | - | - | - | 0.971 | - | Mlig455_004525 {REF} {Length: 89} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_15665} {RNA1310_35504} {RNA815_12120} | |
| 6. | MligTC455_16855 | 131 | 2.72 | Mlig455_045460 | Neo: Int S/G2/M Age: Up-Down-Down |
CTDP1 | 0.967 | - | - | - | - | 0.967 | - | Mlig455_045460 {REF} {Length: 6244} {Pfam: NLI interacting factor-like phosphatase [PF03031.20, score=83.4]; Biotin-lipoyl like [PF13533.8, score=24.8]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=22.8]} {Human: ENSG00000060069, CTDP1, CTD phosphatase subunit 1, [RH, Score=265, Expect=6e-76]; ENSG00000282752, CTDP1, CTD phosphatase subunit 1, [RH, Score=263, Expect=8e-76]} {Mouse: ENSMUSG00000033323, Ctdp1, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1, [RH, Score=266, Expect=4e-76]} {Dmel: FBgn0035026, Fcp1, TFIIF-interacting CTD phosphatase, [RH, Score=300, Expect=7e-89]} {Celegans: WBGene00009479, fcp-1, FCP1 (Yeast TFIIF-interacting CTD phosphatase subunit) homolog, [RH, Score=281, Expect=2e-84]} {Smed: dd_Smed_v6_11212_1_1, dd_Smed_v6_11212_1_1, [RH, Score=263, Expect=8e-77]} {RNA1509_8613} {RNA1310_8460} {RNA815_689.1} |
| 7. | MligTC455_50819 | 291 | 6.07 | Mlig455_060356 | Neo: - Age: - |
0.961 | - | - | - | - | 0.961 | - | Mlig455_060356 {REF} {Length: 2286} {TRANSSPLICED} {Smed: dd_Smed_v6_5953_0_1, dd_Smed_v6_5953_0_1, [RH, Score=92.0, Expect=2e-21]} {RNA1509_34165} {RNA1310_28074.2} {RNA815_19770} | |
| 8. | MligTC455_51389 | 390 | 8.13 | Mlig455_040834 | Neo: - Age: - |
PM20D1 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_040834 {REF} {Length: 1989} {Pfam: Peptidase family M20/M25/M40 [PF01546.30, score=114.7]; Peptidase dimerisation domain [PF07687.16, score=50.8]; Peptidase family M28 [PF04389.19, score=26.9]; M42 glutamyl aminopeptidase [PF05343.16, score=18.1]} {Human: ENSG00000162877, PM20D1, peptidase M20 domain containing 1, [RH, Score=338, Expect=2e-110]} {Mouse: ENSMUSG00000042251, Pm20d1, peptidase M20 domain containing 1, [Score=367, Expect=6e-122]} {Dmel: FBgn0039051, CG17109, [Score=71.6, Expect=4e-13]} {Celegans: WBGene00007509, C10C5.5, Aminoacylase, [Score=74.7, Expect=2e-14]} {Smed: dd_Smed_v6_1519_0_1, dd_Smed_v6_1519_0_1, [Score=62.0, Expect=3e-10]} {RNA1509_42680} {RNA1310_3185.1} {RNA815_5291} |
| 9. | MligTC455_19562 | 303 | 6.31 | Mlig455_051672 | Neo: Int S/G2/M Age: - |
MRPL39 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_051672 {REF} {Length: 2063} {TRANSSPLICED} {Pfam: TGS domain [PF02824.23, score=33.0]} {Human: ENSG00000154719, MRPL39, mitochondrial ribosomal protein L39, [RH, Score=180, Expect=7e-53]} {Mouse: ENSMUSG00000022889, Mrpl39, mitochondrial ribosomal protein L39, [RH, Score=189, Expect=1e-56]} {Dmel: FBgn0036462, mRpL39, mitochondrial ribosomal protein L39, [RH, Score=196, Expect=2e-59]} {Smed: dd_Smed_v6_7576_0_1, dd_Smed_v6_7576_0_1, [RH, Score=187, Expect=3e-56]} {RNA1509_38126, RNA1509_47333, RNA1509_9497} {RNA1310_16310, RNA1509_38126, RNA1509_47333} {RNA1509_38126, RNA1509_47333, RNA815_7406} |
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