Data search
Results for MligTC455_16855
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_16855 | 131 | 2.72 | Mlig455_045460 | Neo: Int S/G2/M Age: Up-Down-Down |
CTDP1 | Mlig455_045460 {REF} {Length: 6244} {Pfam: NLI interacting factor-like phosphatase [PF03031.20, score=83.4]; Biotin-lipoyl like [PF13533.8, score=24.8]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=22.8]} {Human: ENSG00000060069, CTDP1, CTD phosphatase subunit 1, [RH, Score=265, Expect=6e-76]; ENSG00000282752, CTDP1, CTD phosphatase subunit 1, [RH, Score=263, Expect=8e-76]} {Mouse: ENSMUSG00000033323, Ctdp1, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1, [RH, Score=266, Expect=4e-76]} {Dmel: FBgn0035026, Fcp1, TFIIF-interacting CTD phosphatase, [RH, Score=300, Expect=7e-89]} {Celegans: WBGene00009479, fcp-1, FCP1 (Yeast TFIIF-interacting CTD phosphatase subunit) homolog, [RH, Score=281, Expect=2e-84]} {Smed: dd_Smed_v6_11212_1_1, dd_Smed_v6_11212_1_1, [RH, Score=263, Expect=8e-77]} {RNA1509_8613} {RNA1310_8460} {RNA815_689.1} |
Cumulative graph for MligTC455_16855
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.996 | 2.319 | 0.18774 | 0.81989 | |
| RegionR2 | 0.971 | 2.319 | 0.43792 | 0.82715 | |
| RegionR3 | 0.793 | 2.319 | 0.46828 | 0.97441 | |
| RegionR4 | 1.845 | 2.319 | 0.07059 | 0.24351 | |
| RegionR5 | 1.686 | 2.319 | 0.05629 | 0.20389 | |
| RegionR6 | 0.691 | 2.319 | 0.53567 | 1.00000 | |
| RegionR7 | -0.826 | 2.319 | 0.98229 | 1.00000 | |
| RegionR8 | 0.835 | 2.319 | 0.54057 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.217 | 2.319 | 1.00000 | 1.00000 | |
| RegenerationR2 | 0.164 | 2.319 | 0.83714 | 1.00000 | |
| RegenerationR3 | 1.207 | 2.319 | 0.13912 | 0.56514 | |
| RegenerationR4 | 0.489 | 2.319 | 0.55448 | 0.89397 | |
| RegenerationR5 | 1.119 | 2.319 | 0.10273 | 0.48669 | |
| RegenerationR6 | 1.485 | 2.319 | 0.08481 | 0.36448 | |
| RegenerationBL | 0.158 | 2.319 | 0.90524 | 1.00000 | |
| RegenerationTP | -0.114 | 2.319 | 0.93903 | 1.00000 |
Genes with expression patterns similar to MligTC455_16855
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_16855 | 131 | 2.72 | Mlig455_045460 | Neo: Int S/G2/M Age: Up-Down-Down |
CTDP1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_045460 {REF} {Length: 6244} {Pfam: NLI interacting factor-like phosphatase [PF03031.20, score=83.4]; Biotin-lipoyl like [PF13533.8, score=24.8]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=22.8]} {Human: ENSG00000060069, CTDP1, CTD phosphatase subunit 1, [RH, Score=265, Expect=6e-76]; ENSG00000282752, CTDP1, CTD phosphatase subunit 1, [RH, Score=263, Expect=8e-76]} {Mouse: ENSMUSG00000033323, Ctdp1, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1, [RH, Score=266, Expect=4e-76]} {Dmel: FBgn0035026, Fcp1, TFIIF-interacting CTD phosphatase, [RH, Score=300, Expect=7e-89]} {Celegans: WBGene00009479, fcp-1, FCP1 (Yeast TFIIF-interacting CTD phosphatase subunit) homolog, [RH, Score=281, Expect=2e-84]} {Smed: dd_Smed_v6_11212_1_1, dd_Smed_v6_11212_1_1, [RH, Score=263, Expect=8e-77]} {RNA1509_8613} {RNA1310_8460} {RNA815_689.1} |
| 2. | MligTC455_24737 | 137 | 2.85 | Mlig455_000456 | Neo: - Age: - |
ANKRD17 | 1.79 | - | - | - | 0.952 | - | 0.838 | Mlig455_000456 {REF} {Length: 6750} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=230.8]; Ankyrin repeats (many copies) [PF13637.8, score=185.0]; Ankyrin repeat [PF00023.32, score=172.7]; Ankyrin repeat [PF13606.8, score=161.7]; Ankyrin repeats (many copies) [PF13857.8, score=142.9]; KH domain [PF00013.31, score=66.1]; KH domain [PF13083.8, score=24.5]} {Human: ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=387, Expect=6e-113]} {Mouse: ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=491, Expect=2e-148]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=305, Expect=8e-86]} {Celegans: WBGene00011240, R11A8.7, Ankyrin repeat and KH domain-containing protein R11A8.7, [Score=226, Expect=3e-60]} {Smed: dd_Smed_v6_6779_0_1, dd_Smed_v6_6779_0_1, [Score=294, Expect=3e-82]} {RNA1509_44093} {RNA1310_371} {RNA815_13478} |
| 3. | MligTC455_28583 | 1530 | 31.88 | Mlig455_069282 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.324 |
FKBP8 | 1.667 | - | - | - | 0.717 | 0.950 | - | Mlig455_069282 {REF} {Length: 2937} {TRANSSPLICED} {Pfam: FKBP-type peptidyl-prolyl cis-trans isomerase [PF00254.30, score=36.8]; Tetratricopeptide repeat [PF00515.30, score=32.4]; Tetratricopeptide repeat [PF07719.19, score=26.5]; Tetratricopeptide repeat [PF13181.8, score=19.3]} {Human: ENSG00000105701, FKBP8, FK506 binding protein 8, [Score=143, Expect=2e-36]} {Mouse: ENSMUSG00000019428, Fkbp8, FK506 binding protein 8, [Score=139, Expect=3e-35]} {Dmel: FBgn0034368, CG5482, [RH, Score=182, Expect=8e-51]} {Celegans: WBGene00001431, fkb-6, Peptidylprolyl isomerase, [Score=67.0, Expect=2e-11]} {Smed: dd_Smed_v6_1474_0_1, dd_Smed_v6_1474_0_1, [Score=159, Expect=1e-41]} {RNA1509_26580} {RNA1310_10924.2} {RNA815_2056.1} |
| 4. | MligTC455_43978 | 1071 | 22.31 | Mlig455_029823 | Neo: Irradiation Age: logFC(26M/2M)=0.768 Region-enriched R5: 1.073/0.00005 |
GRAMD1A | 0.967 | - | - | - | - | 0.967 | - | Mlig455_029823 {REF} {Length: 3003} {Pfam: GRAM domain [PF02893.22, score=54.8]} {Human: ENSG00000089351, GRAMD1A, GRAM domain containing 1A, [Score=62.8, Expect=4e-10]; ENSG00000155324, GRAMD2B, GRAM domain containing 2B, [Score=62.8, Expect=3e-10]} {Mouse: ENSMUSG00000001700, Gramd3, GRAM domain containing 3, [Score=62.4, Expect=3e-10]; ENSMUSG00000001248, Gramd1a, GRAM domain containing 1A, [Score=60.5, Expect=1e-09]} {Smed: dd_Smed_v6_8544_1_3, dd_Smed_v6_8544_1_3, [Score=63.5, Expect=8e-12]} {RNA1509_12300, RNA1509_24303, RNA1509_25944, RNA1509_27569, RNA1509_35012} {RNA1310_19042, RNA1509_12300, RNA1509_24303, RNA1509_25944, RNA1509_27569, RNA1509_35012} {RNA1509_12300, RNA1509_24303, RNA1509_25944, RNA1509_27569, RNA1509_35012, RNA815_8450.1} |
| 5. | MligTC455_19378 | 206 | 4.29 | Mlig455_016205 | Neo: - Age: - |
MFSD4B | 0.966 | - | - | - | 0.966 | - | - | Mlig455_016205 {REF} {Length: 2626} {Pfam: Major Facilitator Superfamily [PF07690.18, score=19.1]} {Human: ENSG00000173214, MFSD4B, major facilitator superfamily domain containing 4B, [Score=56.6, Expect=6e-08]} {Mouse: ENSMUSG00000038522, Mfsd4b1, major facilitator superfamily domain containing 4B1, [Score=76.3, Expect=2e-14]} {Smed: dd_Smed_v6_8337_0_1, dd_Smed_v6_8337_0_1, [Score=55.8, Expect=3e-08]} {RNA1509_26810} {RNA1310_14671.1} {RNA815_5980} |
| 6. | MligTC455_44495 | 322 | 6.7 | Mlig455_039415 | Neo: - Age: - |
STAT4 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_039415 {REF} {Length: 2741} {TRANSSPLICED} {Pfam: SH2 domain [PF00017.26, score=23.5]} {Human: ENSG00000138378, STAT4, signal transducer and activator of transcription 4, [RH, Score=70.5, Expect=6e-12]} {Mouse: ENSMUSG00000062939, Stat4, signal transducer and activator of transcription 4, [RH, Score=76.3, Expect=7e-14]} {RNA1509_16743, RNA1509_17436} {RNA1310_6522.1, RNA1509_16743, RNA1509_17436} {RNA1509_16743, RNA1509_17436, RNA815_3533} |
| 7. | MligTC455_46384 | 291 | 6.06 | Mlig455_007494 | Neo: - Age: - |
GTF2H1 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_007494 {REF} {Length: 2990} {TRANSSPLICED} {Pfam: BSD domain [PF03909.19, score=86.2]; TFIIH p62 subunit, N-terminal domain [PF08567.13, score=52.8]} {Human: ENSG00000110768, GTF2H1, general transcription factor IIH subunit 1, [RH, Score=314, Expect=3e-99]} {Mouse: ENSMUSG00000006599, Gtf2h1, general transcription factor II H, polypeptide 1, [RH, Score=321, Expect=3e-102]} {Dmel: FBgn0033929, Tfb1, Transcription factor B1, [RH, Score=357, Expect=9e-116]} {Celegans: WBGene00019821, R02D3.3, [RH, Score=159, Expect=5e-42]} {Smed: dd_Smed_v6_10064_0_1, dd_Smed_v6_10064_0_1, [RH, Score=245, Expect=3e-73]} {RNA1509_21043, RNA1509_54813} {RNA1310_9455, RNA1509_21043, RNA1509_54813} {RNA1509_21043, RNA1509_54813, RNA815_5553} |
| 8. | MligTC455_06131 | 66 | 1.37 | Mlig455_019458 | Neo: - Age: - |
NAXD | 0.954 | - | - | 0.954 | - | - | - | Mlig455_019458 {REF} {Length: 2355} {TRANSSPLICED} {Pfam: Carbohydrate kinase [PF01256.19, score=109.9]} {Human: ENSG00000213995, NAXD, NAD(P)HX dehydratase, [Score=133, Expect=2e-36]} {Mouse: ENSMUSG00000031505, Naxd, NAD(P)HX dehydratase, [Score=145, Expect=2e-40]} {Dmel: FBgn0036848, CG10424, [Score=82.4, Expect=1e-17]} {Celegans: WBGene00011298, R107.2, ATP-dependent (S)-NAD(P)H-hydrate dehydratase, [Score=84.7, Expect=2e-18]} {Smed: dd_Smed_v6_4874_0_1, dd_Smed_v6_4874_0_1, [Score=123, Expect=1e-32]} {RNA1509_47247} {RNA1310_18721} {RNA815_20551} |
| 9. | MligTC455_51389 | 390 | 8.13 | Mlig455_040834 | Neo: - Age: - |
PM20D1 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_040834 {REF} {Length: 1989} {Pfam: Peptidase family M20/M25/M40 [PF01546.30, score=114.7]; Peptidase dimerisation domain [PF07687.16, score=50.8]; Peptidase family M28 [PF04389.19, score=26.9]; M42 glutamyl aminopeptidase [PF05343.16, score=18.1]} {Human: ENSG00000162877, PM20D1, peptidase M20 domain containing 1, [RH, Score=338, Expect=2e-110]} {Mouse: ENSMUSG00000042251, Pm20d1, peptidase M20 domain containing 1, [Score=367, Expect=6e-122]} {Dmel: FBgn0039051, CG17109, [Score=71.6, Expect=4e-13]} {Celegans: WBGene00007509, C10C5.5, Aminoacylase, [Score=74.7, Expect=2e-14]} {Smed: dd_Smed_v6_1519_0_1, dd_Smed_v6_1519_0_1, [Score=62.0, Expect=3e-10]} {RNA1509_42680} {RNA1310_3185.1} {RNA815_5291} |
| 10. | MligTC455_21689 | 732 | 15.25 | Mlig455_004809 | Neo: - Age: - |
SLC1A2 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_004809 {REF} {Length: 4537} {Pfam: Sodium:dicarboxylate symporter family [PF00375.20, score=265.7]} {Human: ENSG00000110436, SLC1A2, solute carrier family 1 member 2, [Score=226, Expect=2e-66]; ENSG00000079215, SLC1A3, solute carrier family 1 member 3, [Score=221, Expect=7e-65]} {Mouse: ENSMUSG00000005089, Slc1a2, solute carrier family 1 (glial high affinity glutamate transporter), member 2, [Score=240, Expect=5e-72]} {Dmel: FBgn0026439, Eaat1, Excitatory amino acid transporter 1, [Score=225, Expect=2e-67]} {Celegans: WBGene00001623, glt-5, Amino acid transporter, [Score=227, Expect=6e-68]} {Smed: dd_Smed_v6_1106_0_1, dd_Smed_v6_1106_0_1, [Score=232, Expect=5e-70]} {RNA1509_2285, RNA1509_41415, RNA1509_59567} {RNA1310_2915.2, RNA1509_41415, RNA1509_59567} {RNA1509_41415, RNA1509_59567, RNA815_4395} |
| 11. | MligTC455_48931 | 260 | 5.41 | Mlig455_068891 | Neo: Int S/G2/M |
0.951 | - | - | - | - | - | 0.951 | Mlig455_068891 {REF} {Length: 1249} {NoTransDecoderORF} {RNA1509_35461} {RNA1310_2913} {RNA815_4850.1} | |
| 12. | MligTC455_27386 | 349 | 7.27 | Mlig455_000459 | Neo: - Age: Up-Down-Down |
MAP3K15 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_000459 {REF} {Length: 5841} {TRANSSPLICED} {Pfam: MAP3K TRAFs-binding domain [PF13281.8, score=481.8]; Protein kinase domain [PF00069.27, score=225.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=155.0]; ASK kinase PH domain [PF19039.2, score=72.7]} {Human: ENSG00000180815, MAP3K15, mitogen-activated protein kinase kinase kinase 15, [RH, Score=770, Expect=0.0]} {Mouse: ENSMUSG00000031303, Map3k15, mitogen-activated protein kinase kinase kinase 15, [RH, Score=768, Expect=0.0]} {Dmel: FBgn0014006, Ask1, Apoptotic signal-regulating kinase 1, [RH, Score=822, Expect=0.0]} {Celegans: WBGene00003822, nsy-1, Mitogen-activated protein kinase kinase kinase nsy-1, [RH, Score=695, Expect=0.0]} {Smed: dd_Smed_v6_4849_0_1, dd_Smed_v6_4849_0_1, [RH, Score=841, Expect=0.0]} {RNA1509_48010} {RNA1310_3503.1} {RNA815_4695} |
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