TomoSeq data search

Data search

Results for MligTC455_46157

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_46157

2381

49.61

Mlig455_043690

Neo: -

Age: -

Region-enriched R4: 1.390/0.00101

EHD1

Mlig455_043690 {REF} {Length: 3391} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF5600) [PF18150.3, score=143.5]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=62.1]; N-terminal EH-domain containing protein [PF16880.7, score=58.8]; Dynamin family [PF00350.25, score=54.1]; 50S ribosome-binding GTPase [PF01926.25, score=34.5]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.1]; EF hand [PF00036.34, score=20.0]} {Human: ENSG00000110047, EHD1, EH domain containing 1, [RH, Score=709, Expect=0.0]; ENSG00000013016, EHD3, EH domain containing 3, [RH, Score=704, Expect=0.0]; ENSG00000103966, EHD4, EH domain containing 4, [RH, Score=693, Expect=0.0]} {Mouse: ENSMUSG00000024772, Ehd1, EH-domain containing 1, [RH, Score=710, Expect=0.0]; ENSMUSG00000107039, Ehd1, EH-domain containing 1, [RH, Score=710, Expect=0.0]; ENSMUSG00000024065, Ehd3, EH-domain containing 3, [RH, Score=697, Expect=0.0]; ENSMUSG00000027293, Ehd4, EH-domain containing 4, [RH, Score=690, Expect=0.0]} {Dmel: FBgn0016693, Past1, Putative Achaete Scute Target 1, [RH, Score=736, Expect=0.0]} {Celegans: WBGene00004373, rme-1, Receptor Mediated Endocytosis; Receptor-mediated endocytosis 1 isoform I, [RH, Score=729, Expect=0.0]} {Smed: dd_Smed_v6_3148_0_1, dd_Smed_v6_3148_0_1, [RH, Score=739, Expect=0.0]} {RNA1509_10447, RNA1509_18982, RNA1509_19631, RNA1509_2034, RNA1509_22003} {RNA1310_6511.3, RNA1509_10447, RNA1509_18982, RNA1509_19631, RNA1509_22003} {RNA1509_10447, RNA1509_18982, RNA1509_19631, RNA1509_22003, RNA815_5849.2}

Cumulative graph for MligTC455_46157

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.31	5.844	0.07267	0.59902
RegionR2	-0.385	5.844	0.29889	0.68765
RegionR3	-0.175	5.844	0.57234	1.00000
RegionR4	1.39	5.844	0.00006	0.00101
RegionR5	0.476	5.844	0.09245	0.28954
RegionR6	0.812	5.844	0.00548	0.11428
RegionR7	-0.01	5.844	0.97802	1.00000
RegionR8	-0.798	5.844	0.08197	0.54389

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.637	5.844	0.57493	1.00000
RegenerationR2	-0.005	5.844	0.98748	1.00000
RegenerationR3	-0.116	5.844	0.74973	0.96469
RegenerationR4	-0.753	5.844	0.04143	0.32763
RegenerationR5	-0.018	5.844	0.95751	1.00000
RegenerationR6	-0.209	5.844	0.54624	0.83676
RegenerationBL	-0.413	5.844	0.27925	0.64002
RegenerationTP	0.084	5.844	0.83766	1.00000

Genes with expression patterns similar to MligTC455_46157

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46157	2381	49.61	Mlig455_043690	Neo: - Age: - Region-enriched R4: 1.390/0.00101	EHD1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_043690 {REF} {Length: 3391} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF5600) [PF18150.3, score=143.5]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=62.1]; N-terminal EH-domain containing protein [PF16880.7, score=58.8]; Dynamin family [PF00350.25, score=54.1]; 50S ribosome-binding GTPase [PF01926.25, score=34.5]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.1]; EF hand [PF00036.34, score=20.0]} {Human: ENSG00000110047, EHD1, EH domain containing 1, [RH, Score=709, Expect=0.0]; ENSG00000013016, EHD3, EH domain containing 3, [RH, Score=704, Expect=0.0]; ENSG00000103966, EHD4, EH domain containing 4, [RH, Score=693, Expect=0.0]} {Mouse: ENSMUSG00000024772, Ehd1, EH-domain containing 1, [RH, Score=710, Expect=0.0]; ENSMUSG00000107039, Ehd1, EH-domain containing 1, [RH, Score=710, Expect=0.0]; ENSMUSG00000024065, Ehd3, EH-domain containing 3, [RH, Score=697, Expect=0.0]; ENSMUSG00000027293, Ehd4, EH-domain containing 4, [RH, Score=690, Expect=0.0]} {Dmel: FBgn0016693, Past1, Putative Achaete Scute Target 1, [RH, Score=736, Expect=0.0]} {Celegans: WBGene00004373, rme-1, Receptor Mediated Endocytosis; Receptor-mediated endocytosis 1 isoform I, [RH, Score=729, Expect=0.0]} {Smed: dd_Smed_v6_3148_0_1, dd_Smed_v6_3148_0_1, [RH, Score=739, Expect=0.0]} {RNA1509_10447, RNA1509_18982, RNA1509_19631, RNA1509_2034, RNA1509_22003} {RNA1310_6511.3, RNA1509_10447, RNA1509_18982, RNA1509_19631, RNA1509_22003} {RNA1509_10447, RNA1509_18982, RNA1509_19631, RNA1509_22003, RNA815_5849.2}
2.	MligTC455_45638	2531	52.72	Mlig455_029644	Neo: - Age: Down-Down-Up	DLG1	1.813	-	-	-	0.850	-	0.963	Mlig455_029644 {REF} {Length: 2058} {TRANSSPLICED} {Pfam: Guanylate kinase [PF00625.23, score=201.1]; PDZ domain [PF00595.26, score=68.8]; PDZ domain [PF17820.3, score=26.5]; SH3 domain [PF00018.30, score=26.4]; Variant SH3 domain [PF07653.19, score=24.1]} {Human: ENSG00000075711, DLG1, discs large MAGUK scaffold protein 1, [RH, Score=516, Expect=2e-174]} {Mouse: ENSMUSG00000022770, Dlg1, discs large MAGUK scaffold protein 1, [RH, Score=513, Expect=7e-173]} {Dmel: FBgn0001624, dlg1, discs large 1, [RH, Score=540, Expect=0.0]} {Celegans: WBGene00001006, dlg-1, Drosophila Discs LarGe homolog; MAGUK protein DLG-1; SAP97-like protein DLG-1, [Score=385, Expect=2e-123]} {Smed: dd_Smed_v6_8511_0_1, dd_Smed_v6_8511_0_1, [Score=352, Expect=1e-115]} {RNA1509_15416, RNA1509_25751, RNA1509_41994, RNA1509_6874} {RNA1310_21812.1, RNA1509_15416, RNA1509_25751, RNA1509_41994, RNA1509_6874} {RNA1509_15416, RNA1509_25751, RNA1509_41994, RNA1509_6874, RNA815_12065.1}
3.	MligTC455_19668	814	16.96	Mlig455_048937	Neo: - Age: -	METAP2	1.765	-	-	-	0.953	-	0.812	Mlig455_048937 {REF} {Length: 1513} {Pfam: Metallopeptidase family M24 [PF00557.26, score=142.2]} {Human: ENSG00000111142, METAP2, methionyl aminopeptidase 2, [Score=504, Expect=3e-179]} {Mouse: ENSMUSG00000036112, Metap2, methionine aminopeptidase 2, [Score=501, Expect=9e-178]} {Dmel: FBgn0283478, und, uninitiated, [Score=492, Expect=1e-174]} {Celegans: WBGene00003130, map-2, Methionine AminoPeptidase, [Score=486, Expect=2e-172]} {Smed: dd_Smed_v6_2809_0_1, dd_Smed_v6_2809_0_1, [Score=504, Expect=2e-180]} {RNA1509_6431} {RNA1310_15348} {RNA815_5667}
4.	MligTC455_44405	655	13.64	Mlig455_001574	Neo: Neoblast, stringent Age: - Region-enriched R5: 1.701/0.00338	BRCA1	1.735	-	0.772	-	0.963	-	-	Mlig455_001574 {REF} {Length: 3610} {TRANSSPLICED} {Pfam: BRCA1 C Terminus (BRCT) domain [PF00533.28, score=30.0]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=19.1]} {Human: ENSG00000012048, BRCA1, BRCA1, DNA repair associated, [RH, Score=120, Expect=2e-27]} {Mouse: ENSMUSG00000017146, Brca1, breast cancer 1, early onset, [RH, Score=113, Expect=2e-25]} {Celegans: WBGene00000264, brc-1, BRCa homolog (Tumor suppressor gene Brca1), [RH, Score=68.6, Expect=7e-12]} {RNA1509_8035} {RNA1310_8504.3, RNA1509_8035} {RNA1509_8035, RNA815_13987}
5.	MligTC455_34965	67	1.4	Mlig455_061836	Neo: - Age: - Region-enriched R4: 5.310/0.00088 Region-enriched R5: 4.506/0.00012	TRMU	0.978	-	-	-	-	0.978	-	Mlig455_061836 {REF} {Length: 1305} {TRANSSPLICED} {Pfam: tRNA methyl transferase [PF03054.18, score=391.7]; Thiamine biosynthesis protein (ThiI) [PF02568.16, score=31.9]; Asparagine synthase [PF00733.23, score=20.9]; NAD synthase [PF02540.19, score=18.0]} {Human: ENSG00000100416, TRMU, tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase, [RH, Score=332, Expect=1e-110]} {Mouse: ENSMUSG00000022386, Trmu, tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase, [RH, Score=332, Expect=4e-111]} {Dmel: FBgn0040337, CG3021, [RH, Score=348, Expect=9e-118]} {Celegans: WBGene00007114, mttu-1, Probable mitochondrial tRNA-specific 2-thiouridylase 1, [RH, Score=297, Expect=3e-98]} {Smed: dd_Smed_v6_12984_0_1, dd_Smed_v6_12984_0_1, [RH, Score=357, Expect=2e-121]} {RNA1509_13037} {RNA1310_15709.1} {RNA815_7452}
6.	MligTC455_35522	1127	23.49	Mlig455_032860	Neo: - Age: Up-Up-Down, logFC(26M/2M)=0.244	AP3D1	0.972	-	-	-	0.972	-	-	Mlig455_032860 {REF} {Length: 6535} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=428.0]; AP-3 complex subunit delta-1 [PF06375.13, score=64.2]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=57.0]; HEAT repeats [PF13646.8, score=24.2]; HEAT repeat [PF02985.24, score=22.8]} {Human: ENSG00000065000, AP3D1, adaptor related protein complex 3 subunit delta 1, [RH, Score=951, Expect=0.0]} {Mouse: ENSMUSG00000020198, Ap3d1, adaptor-related protein complex 3, delta 1 subunit, [RH, Score=951, Expect=0.0]} {Dmel: FBgn0001087, g, garnet, [RH, Score=894, Expect=0.0]} {Celegans: WBGene00000162, apd-3, AP-3 complex subunit delta, [RH, Score=810, Expect=0.0]} {Smed: dd_Smed_v6_2534_0_1, dd_Smed_v6_2534_0_1, [RH, Score=892, Expect=0.0]} {RNA1509_2967} {RNA1310_1080.1} {RNA815_531.1}
7.	MligTC455_22409	207	4.32	Mlig455_020359	Neo: - Age: logFC(26M/2M)=0.255		0.961	-	-	-	0.961	-	-	Mlig455_020359 {REF} {Length: 8226} {TRANSSPLICED} {Smed: dd_Smed_v6_1485_0_1, dd_Smed_v6_1485_0_1, [Score=63.5, Expect=1e-09]} {RNA1509_20025, RNA1509_22652, RNA1509_3320, RNA1509_49475} {RNA1310_645, RNA1509_20025, RNA1509_22652, RNA1509_49475} {RNA1509_20025, RNA1509_22652, RNA1509_49475, RNA815_169.1}
8.	MligTC455_09737	27	0.55	Mlig455_013172	Neo: - Age: -		0.959	-	-	-	0.959	-	-	Mlig455_013172 {REF} {Length: 1917} {NoTransDecoderORF} {RNA1310_57188} {RNA815_38434}
9.	MligTC455_12668	71	1.48	Mlig455_062981, Mlig455_062987	Neo: - Age: -		0.959	-	-	-	0.959	-	-	Mlig455_062981 {REF} {Length: 1508} {RNA1509_39161} {RNA1310_17318} {RNA815_13240} Mlig455_062987 {REF} {Length: 1610} {RNA1509_39161} {RNA1310_17318} {RNA815_13240}
10.	MligTC455_51855	73	1.52	Mlig455_045651	Neo: - Age: Up-Up-Down Region-enriched R4: 3.953/0.00972 Region-enriched R5: 2.666/0.01710		0.959	-	-	-	-	0.959	-	Mlig455_045651 {REF} {Length: 976} {NoTransDecoderORF} {RNA1509_57695} {RNA1310_42783} {RNA815_21212}
11.	MligTC455_49428	298	6.2	Mlig455_005078	Neo: Irradiation Age: - Region-enriched R5: 2.298/0.00000		0.957	-	-	-	0.957	-	-	Mlig455_005078 {REF} {Length: 3358} {Pfam: C2H2-type zinc-finger domain [PF13909.8, score=45.7]; Zinc finger, C2H2 type [PF00096.28, score=25.1]; C2H2-type zinc finger [PF13894.8, score=21.5]; Protein of unknown function (DUF2722) [PF10846.10, score=20.3]} {Smed: dd_Smed_v6_36433_0_1, dd_Smed_v6_36433_0_1, [RH, Score=177, Expect=3e-48]} {RNA1509_19024} {RNA1310_8889} {RNA815_15557}
12.	MligTC455_13686	81	1.69	Mlig455_025201	Neo: - Age: -		0.953	-	-	-	0.953	-	-	Mlig455_025201 {REF} {Length: 513} {NoTransDecoderORF} {RNA1509_57863} {RNA1310_12861} {RNA815_64064}
13.	MligTC455_50084	4659	97.05	Mlig455_010661	Neo: - Age: -	PSMA3	0.953	-	-	-	0.953	-	-	Mlig455_010661 {REF} {Length: 1164} {TRANSSPLICED} {Pfam: Proteasome subunit [PF00227.28, score=165.2]; Proteasome subunit A N-terminal signature [PF10584.11, score=40.5]} {Human: ENSG00000100567, PSMA3, proteasome subunit alpha 3, [RH, Score=295, Expect=1e-100]} {Mouse: ENSMUSG00000060073, Psma3, proteasome (prosome, macropain) subunit, alpha type 3, [RH, Score=295, Expect=4e-101]} {Dmel: FBgn0023175, Prosalpha7, Proteasome alpha7 subunit, [RH, Score=246, Expect=1e-81]} {Celegans: WBGene00003928, pas-7, Proteasome subunit alpha type-3, [RH, Score=209, Expect=1e-67]} {Smed: dd_Smed_v6_1557_0_1, dd_Smed_v6_1557_0_1, [RH, Score=300, Expect=2e-103]} {RNA1509_12906, RNA1509_16535, RNA1509_49409, RNA1509_5669} {RNA1310_29338, RNA1509_12906, RNA1509_49409, RNA1509_5669} {RNA1509_12906, RNA1509_49409, RNA1509_5669, RNA815_13245}

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