Data search
Results for MligTC455_44545
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_44545 | 600 | 12.50 | Mlig455_058204 | Neo: - Age: Down-Up-Down Region-enriched R4: 1.212/0.01426 |
PPP2R3C | Mlig455_058204 {REF} {Length: 2622} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=44.6]; EF-hand domain [PF13405.8, score=34.0]; EF-hand domain [PF17958.3, score=28.6]; EF hand [PF00036.34, score=21.8]; EF hand [PF13202.8, score=19.7]} {Human: ENSG00000092020, PPP2R3C, protein phosphatase 2 regulatory subunit B''gamma, [RH, Score=568, Expect=0.0]} {Mouse: ENSMUSG00000021022, Ppp2r3c, protein phosphatase 2, regulatory subunit B'', gamma, [RH, Score=569, Expect=0.0]} {Dmel: FBgn0038744, CG4733, [Score=131, Expect=2e-32]} {Celegans: WBGene00007710, rsa-1, Serine/threonine-protein phosphatase 2A regulatory subunit rsa-1, [RH, Score=56.2, Expect=2e-08]} {Smed: dd_Smed_v6_10614_0_1, dd_Smed_v6_10614_0_1, [RH, Score=551, Expect=0.0]} {RNA1509_19511, RNA1509_7728} {RNA1310_13100.1, RNA1509_19511, RNA1509_7728} {RNA1509_19511, RNA1509_7728, RNA815_4481} |
Cumulative graph for MligTC455_44545
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.058 | 3.949 | 0.95225 | 1.00000 | |
| RegionR2 | 0.316 | 3.949 | 0.44713 | 0.83540 | |
| RegionR3 | -0.301 | 3.949 | 0.40568 | 0.93261 | |
| RegionR4 | 1.212 | 3.949 | 0.00150 | 0.01426 | |
| RegionR5 | 1.192 | 3.949 | 0.00003 | 0.00067 | |
| RegionR6 | 0.16 | 3.949 | 0.65609 | 1.00000 | |
| RegionR7 | -1.047 | 3.949 | 0.05239 | 0.44032 | |
| RegionR8 | -1.589 | 3.949 | 0.02183 | 0.28848 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.261 | 3.949 | 0.22351 | 0.95604 | |
| RegenerationR2 | -0.34 | 3.949 | 0.29442 | 0.73672 | |
| RegenerationR3 | 0.33 | 3.949 | 0.39561 | 0.79994 | |
| RegenerationR4 | -0.641 | 3.949 | 0.08604 | 0.46179 | |
| RegenerationR5 | 0.005 | 3.949 | 0.98985 | 1.00000 | |
| RegenerationR6 | -0.055 | 3.949 | 0.88928 | 1.00000 | |
| RegenerationBL | -0.14 | 3.949 | 0.82458 | 1.00000 | |
| RegenerationTP | 0.951 | 3.949 | 0.12130 | 0.53046 |
Genes with expression patterns similar to MligTC455_44545
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_44545 | 600 | 12.5 | Mlig455_058204 | Neo: - Age: Down-Up-Down Region-enriched R4: 1.212/0.01426 |
PPP2R3C | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_058204 {REF} {Length: 2622} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=44.6]; EF-hand domain [PF13405.8, score=34.0]; EF-hand domain [PF17958.3, score=28.6]; EF hand [PF00036.34, score=21.8]; EF hand [PF13202.8, score=19.7]} {Human: ENSG00000092020, PPP2R3C, protein phosphatase 2 regulatory subunit B''gamma, [RH, Score=568, Expect=0.0]} {Mouse: ENSMUSG00000021022, Ppp2r3c, protein phosphatase 2, regulatory subunit B'', gamma, [RH, Score=569, Expect=0.0]} {Dmel: FBgn0038744, CG4733, [Score=131, Expect=2e-32]} {Celegans: WBGene00007710, rsa-1, Serine/threonine-protein phosphatase 2A regulatory subunit rsa-1, [RH, Score=56.2, Expect=2e-08]} {Smed: dd_Smed_v6_10614_0_1, dd_Smed_v6_10614_0_1, [RH, Score=551, Expect=0.0]} {RNA1509_19511, RNA1509_7728} {RNA1310_13100.1, RNA1509_19511, RNA1509_7728} {RNA1509_19511, RNA1509_7728, RNA815_4481} |
| 2. | MligTC455_44544 | 620 | 12.92 | Mlig455_058182 | Neo: - Age: Down-Up-Up Region-enriched R4: 1.294/0.00842 |
PPP2R3C | 5.938 | 0.998 | 0.998 | 0.996 | 0.963 | 0.987 | 0.996 | Mlig455_058182 {REF} {Length: 1425} {TRANSSPLICED} {Human: ENSG00000092020, PPP2R3C, protein phosphatase 2 regulatory subunit B''gamma, [Score=96.7, Expect=2e-22]} {Mouse: ENSMUSG00000021022, Ppp2r3c, protein phosphatase 2, regulatory subunit B'', gamma, [Score=96.7, Expect=1e-22]} {Smed: dd_Smed_v6_10614_0_1, dd_Smed_v6_10614_0_1, [Score=92.4, Expect=1e-21]} {RNA1509_19511} {RNA1310_13100.1} {RNA815_4481} |
| 3. | MligTC455_44543 | 362 | 7.54 | Mlig455_058012 | Neo: - Age: - Region-enriched R4: 1.998/0.00309 |
PPP2R3C | 3.566 | 0.856 | - | 0.911 | - | 0.849 | 0.950 | Mlig455_058012 {REF} {Length: 2896} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=44.5]; EF-hand domain [PF13405.8, score=33.9]; EF-hand domain [PF17958.3, score=28.5]; EF hand [PF00036.34, score=21.8]; EF hand [PF13202.8, score=19.7]} {Human: ENSG00000092020, PPP2R3C, protein phosphatase 2 regulatory subunit B''gamma, [RH, Score=568, Expect=0.0]} {Mouse: ENSMUSG00000021022, Ppp2r3c, protein phosphatase 2, regulatory subunit B'', gamma, [RH, Score=568, Expect=0.0]} {Dmel: FBgn0038744, CG4733, [Score=130, Expect=3e-32]} {Celegans: WBGene00007710, rsa-1, Serine/threonine-protein phosphatase 2A regulatory subunit rsa-1, [RH, Score=56.2, Expect=2e-08]} {Smed: dd_Smed_v6_10614_0_1, dd_Smed_v6_10614_0_1, [RH, Score=550, Expect=0.0]} {RNA1509_7728} {RNA1310_13100.1} {RNA815_4481} |
| 4. | MligTC455_41346 | 996 | 20.75 | Mlig455_001785 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.236/0.00029 |
NUP155 | 1.746 | 0.780 | - | - | - | - | 0.966 | Mlig455_001785 {REF} {Length: 4486} {TRANSSPLICED} {Pfam: Nup133 N terminal like [PF08801.13, score=186.4]; Non-repetitive/WGA-negative nucleoporin C-terminal [PF03177.16, score=47.7]} {Human: ENSG00000113569, NUP155, nucleoporin 155, [RH, Score=298, Expect=9e-83]} {Mouse: ENSMUSG00000022142, Nup155, nucleoporin 155, [RH, Score=521, Expect=1e-162]} {Dmel: FBgn0021761, Nup154, Nucleoporin 154kD, [RH, Score=345, Expect=5e-99]} {Celegans: WBGene00003794, npp-8, Nuclear Pore complex Protein, [RH, Score=239, Expect=1e-64]} {Smed: dd_Smed_v6_7844_0_1, dd_Smed_v6_7844_0_1, [RH, Score=572, Expect=0.0]} {RNA1509_7166} {RNA1310_1724.1, RNA1509_7166} {RNA1509_7166, RNA815_3166} |
| 5. | MligTC455_46778 | 9506 | 198.05 | Mlig455_013214, Mlig455_013237, Mlig455_013309 | Neo: - Age: Down-Up-Up |
ELOC | 0.962 | - | - | - | 0.962 | - | - | Mlig455_013214 {REF} {Length: 1220} {TRANSSPLICED} {Pfam: Skp1 family, tetramerisation domain [PF03931.17, score=48.6]} {Human: ENSG00000154582, ELOC, elongin C, [RH, Score=206, Expect=3e-70]} {Mouse: ENSMUSG00000079658, Eloc, elongin C, [RH, Score=206, Expect=2e-70]} {Dmel: FBgn0266711, EloC, Elongin C, [RH, Score=205, Expect=5e-70]} {Celegans: WBGene00001236, elc-1, ELongin C, [RH, Score=177, Expect=1e-58]} {Smed: dd_Smed_v6_2593_0_1, dd_Smed_v6_2593_0_1, [RH, Score=209, Expect=9e-72]} {RNA1509_7064} {RNA1310_27905.1} {RNA815_12243.1} Mlig455_013237 {REF} {Length: 1224} {TRANSSPLICED} {Pfam: Skp1 family, tetramerisation domain [PF03931.17, score=48.6]} {Human: ENSG00000154582, ELOC, elongin C, [RH, Score=206, Expect=3e-70]} {Mouse: ENSMUSG00000079658, Eloc, elongin C, [RH, Score=206, Expect=2e-70]} {Dmel: FBgn0266711, EloC, Elongin C, [RH, Score=205, Expect=5e-70]} {Celegans: WBGene00001236, elc-1, ELongin C, [RH, Score=177, Expect=1e-58]} {Smed: dd_Smed_v6_2593_0_1, dd_Smed_v6_2593_0_1, [RH, Score=209, Expect=9e-72]} {RNA1509_38370, RNA1509_4955, RNA1509_7064, RNA1509_7749} {RNA1310_27905.1, RNA1509_38370, RNA1509_4955, RNA1509_7064, RNA1509_7749} {RNA1509_38370, RNA1509_4955, RNA1509_7064, RNA1509_7749, RNA815_12243.1} Mlig455_013309 {REF} {Length: 1220} {TRANSSPLICED} {Pfam: Skp1 family, tetramerisation domain [PF03931.17, score=48.6]} {Human: ENSG00000154582, ELOC, elongin C, [RH, Score=206, Expect=3e-70]} {Mouse: ENSMUSG00000079658, Eloc, elongin C, [RH, Score=206, Expect=2e-70]} {Dmel: FBgn0266711, EloC, Elongin C, [RH, Score=205, Expect=5e-70]} {Celegans: WBGene00001236, elc-1, ELongin C, [RH, Score=177, Expect=1e-58]} {Smed: dd_Smed_v6_2593_0_1, dd_Smed_v6_2593_0_1, [RH, Score=209, Expect=9e-72]} {RNA1509_7064} {RNA1310_27905.1} {RNA815_12243.1} |
| 6. | MligTC455_39485 | 2469 | 51.44 | Mlig455_063411, Mlig455_068912 | Neo: - Age: - |
GID8 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_063411 {REF} {Length: 2478} {Pfam: CTLH/CRA C-terminal to LisH motif domain [PF10607.11, score=62.0]; LisH [PF08513.13, score=19.1]} {Human: ENSG00000101193, GID8, GID complex subunit 8 homolog, [Score=87.8, Expect=3e-19]} {Mouse: ENSMUSG00000027573, Gid8, GID complex subunit 8, [Score=88.6, Expect=1e-19]} {Dmel: FBgn0030944, CG6617, [Score=100, Expect=5e-24]} {Smed: dd_Smed_v6_10905_0_1, dd_Smed_v6_10905_0_1, [Score=73.9, Expect=7e-15]} {RNA1509_12644, RNA1509_22603} {RNA1310_19676.1, RNA1509_22603} {RNA1509_22603, RNA815_15737.1} Mlig455_068912 {REF} {Length: 2164} {Pfam: CTLH/CRA C-terminal to LisH motif domain [PF10607.11, score=64.1]; LisH [PF08513.13, score=19.5]} {Human: ENSG00000101193, GID8, GID complex subunit 8 homolog, [Score=88.2, Expect=1e-19]} {Mouse: ENSMUSG00000027573, Gid8, GID complex subunit 8, [Score=89.0, Expect=4e-20]} {Dmel: FBgn0030944, CG6617, [Score=100, Expect=1e-24]} {Smed: dd_Smed_v6_10905_0_1, dd_Smed_v6_10905_0_1, [Score=74.7, Expect=2e-15]} {RNA1509_12644, RNA1509_35768} {RNA1310_19676.1, RNA1509_12644, RNA1509_35768} {RNA1509_12644, RNA1509_35768, RNA815_15737.1} |
| 7. | MligTC455_36753 | 212 | 4.42 | Mlig455_055024 | Neo: Irradiation Age: Up-Up-Down Region-enriched R4: 1.685/0.04355 |
ZNF700 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_055024 {REF} {Length: 3631} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=64.7]; C2H2-type zinc finger [PF13894.8, score=54.2]; Zinc-finger double domain [PF13465.8, score=47.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=29.6]; zinc-finger-containing domain [PF11672.10, score=23.2]} {Human: ENSG00000196757, ZNF700, zinc finger protein 700, [Score=107, Expect=2e-23]} {Mouse: ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=110, Expect=3e-24]; ENSMUSG00000078902, Gm14443, predicted gene 14443, [Score=108, Expect=6e-24]} {Dmel: FBgn0000286, Cf2, Chorion factor 2, [Score=74.7, Expect=1e-13]} {Celegans: WBGene00003380, mnm-2, Zinc finger protein mnm-2, [Score=76.6, Expect=3e-15]} {Smed: dd_Smed_v6_10911_0_1, dd_Smed_v6_10911_0_1, [Score=94.7, Expect=7e-20]} {RNA1509_18013} {RNA1310_5466.1} {RNA815_8226} |
| 8. | MligTC455_33582 | 299 | 6.23 | Mlig455_040259, Mlig455_040260, Mlig455_040261 | Neo: Germline Age: Up-Up-Down, logFC(26M/2M)=0.526 Region-specific R4: 3.911 |
0.951 | - | - | - | - | 0.951 | - | Mlig455_040259 {REF} {Length: 2395} {TRANSSPLICED} {Smed: dd_Smed_v6_12004_0_1, dd_Smed_v6_12004_0_1, [RH, Score=103, Expect=1e-26]} {RNA1509_20529} {RNA1310_30668} {RNA815_15892.1} Mlig455_040260 {REF} {Length: 2116} {TRANSSPLICED} {Smed: dd_Smed_v6_12004_0_1, dd_Smed_v6_12004_0_1, [RH, Score=104, Expect=7e-27]} {RNA1509_20529} {RNA1310_31649} {RNA815_15892.1} Mlig455_040261 {REF} {Length: 2116} {TRANSSPLICED} {Smed: dd_Smed_v6_12004_0_1, dd_Smed_v6_12004_0_1, [RH, Score=104, Expect=7e-27]} {RNA1509_20529} {RNA1310_31649, RNA1509_20529} {RNA1509_20529, RNA815_15892.1} |
|
| 9. | MligTC455_47639 | 256 | 5.34 | Mlig455_046133 | Neo: - Age: - |
USF2 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_046133 {REF} {Length: 1681} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=50.4]} {Human: ENSG00000105698, USF2, upstream transcription factor 2, c-fos interacting, [Score=59.3, Expect=1e-09]} {Mouse: ENSMUSG00000058239, Usf2, upstream transcription factor 2, [Score=57.8, Expect=6e-09]} {Dmel: FBgn0029711, Usf, [Score=54.7, Expect=5e-08]} {Smed: dd_Smed_v6_4871_0_1, dd_Smed_v6_4871_0_1, [RH, Score=55.5, Expect=2e-08]} {RNA1509_24437} {RNA1310_26406} {RNA815_7684} |