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Results for MligTC455_44631

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_44631 1065 22.20 Mlig455_031535

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.307

 SNRNP70 Mlig455_031535 {REF} {Length: 1596} {TRANSSPLICED} {Pfam: U1 small nuclear ribonucleoprotein of 70kDa MW N terminal [PF12220.10, score=92.9]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=67.0]} {Human: ENSG00000104852, SNRNP70, small nuclear ribonucleoprotein U1 subunit 70, [RH, Score=238, Expect=1e-75]} {Mouse: ENSMUSG00000063511, Snrnp70, small nuclear ribonucleoprotein 70 (U1), [RH, Score=238, Expect=1e-75]} {Dmel: FBgn0016978, snRNP-U1-70K, small ribonucleoprotein particle U1 subunit 70K, [RH, Score=247, Expect=4e-79]} {Celegans: WBGene00004390, rnp-7, RNP (RRM RNA binding domain) containing, [RH, Score=242, Expect=9e-79]} {Smed: dd_Smed_v6_633_0_1, dd_Smed_v6_633_0_1, [RH, Score=315, Expect=2e-107]} {RNA1509_11652, RNA1509_27470} {RNA1310_6001.2, RNA1509_11652, RNA1509_27470} {RNA1509_11652, RNA1509_27470, RNA815_2161.1}

Cumulative graph for MligTC455_44631

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.345 4.696 0.73795 1.00000
RegionR2 0.546 4.696 0.28156 0.66821
RegionR3 0.194 4.696 0.65102 1.00000
RegionR4 0.01 4.696 0.98180 1.00000
RegionR5 0.308 4.696 0.43226 0.79210
RegionR6 -0.093 4.696 0.83279 1.00000
RegionR7 0.171 4.696 0.73680 1.00000
RegionR8 -0.791 4.696 0.27128 0.89434

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.473 4.696 0.74971 1.00000
RegenerationR2 -0.15 4.696 0.76011 0.97687
RegenerationR3 -0.073 4.696 0.88695 1.00000
RegenerationR4 0.295 4.696 0.58531 0.90717
RegenerationR5 -0.473 4.696 0.34057 0.75836
RegenerationR6 0.73 4.696 0.14929 0.47354
RegenerationBL 0.945 4.696 0.07301 0.31513
RegenerationTP 0.312 4.696 0.61606 0.97016


Genes with expression patterns similar to MligTC455_44631

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_44631 1065 22.2 Mlig455_031535

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.307

 SNRNP70 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_031535 {REF} {Length: 1596} {TRANSSPLICED} {Pfam: U1 small nuclear ribonucleoprotein of 70kDa MW N terminal [PF12220.10, score=92.9]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=67.0]} {Human: ENSG00000104852, SNRNP70, small nuclear ribonucleoprotein U1 subunit 70, [RH, Score=238, Expect=1e-75]} {Mouse: ENSMUSG00000063511, Snrnp70, small nuclear ribonucleoprotein 70 (U1), [RH, Score=238, Expect=1e-75]} {Dmel: FBgn0016978, snRNP-U1-70K, small ribonucleoprotein particle U1 subunit 70K, [RH, Score=247, Expect=4e-79]} {Celegans: WBGene00004390, rnp-7, RNP (RRM RNA binding domain) containing, [RH, Score=242, Expect=9e-79]} {Smed: dd_Smed_v6_633_0_1, dd_Smed_v6_633_0_1, [RH, Score=315, Expect=2e-107]} {RNA1509_11652, RNA1509_27470} {RNA1310_6001.2, RNA1509_11652, RNA1509_27470} {RNA1509_11652, RNA1509_27470, RNA815_2161.1}
2. MligTC455_18138 825 17.19 Mlig455_040140

Neo: -

Age: -

 ATG4B 1.735 - 0.776 - 0.959 - - Mlig455_040140 {REF} {Length: 1618} {TRANSSPLICED} {Pfam: Peptidase family C54 [PF03416.21, score=311.7]} {Human: ENSG00000168397, ATG4B, autophagy related 4B cysteine peptidase, [RH, Score=320, Expect=5e-107]; ENSG00000101844, ATG4A, autophagy related 4A cysteine peptidase, [RH, Score=310, Expect=9e-103]} {Mouse: ENSMUSG00000026280, Atg4b, autophagy related 4B, cysteine peptidase, [RH, Score=319, Expect=2e-106]; ENSMUSG00000079418, Atg4a, autophagy related 4A, cysteine peptidase, [RH, Score=310, Expect=3e-103]; ENSMUSG00000116318, Atg4a, autophagy related 4A, cysteine peptidase, [RH, Score=310, Expect=3e-103]; ENSMUSG00000087119, Atg4a-ps, autophagy related 4A, pseudogene, [RH, Score=310, Expect=7e-103]} {Dmel: FBgn0031298, Atg4a, Autophagy-related 4a, [RH, Score=285, Expect=2e-93]} {Celegans: WBGene00013595, atg-4.1, Cysteine protease, [RH, Score=280, Expect=9e-91]} {Smed: dd_Smed_v6_6720_0_1, dd_Smed_v6_6720_0_1, [RH, Score=301, Expect=2e-99]} {RNA1509_13853} {RNA1310_19345} {RNA815_1601.1}
3. MligTC455_24458 2287 47.64 Mlig455_013839, Mlig455_059935

Neo: -

Age: logFC(26M/2M)=0.235

 BUD13 1.713 - - 0.758 0.955 - -

Mlig455_013839 {REF} {Length: 2017} {TRANSSPLICED} {Pfam: Pre-mRNA-splicing factor of RES complex [PF09736.11, score=103.4]} {Human: ENSG00000137656, BUD13, BUD13 homolog, [RH, Score=120, Expect=1e-28]} {Mouse: ENSMUSG00000032077, Bud13, BUD13 homolog, [RH, Score=114, Expect=4e-26]} {Dmel: FBgn0039210, CG13625, [RH, Score=182, Expect=3e-49]} {Celegans: WBGene00011142, R08D7.1, BUD13 homolog, [Score=134, Expect=1e-33]} {Smed: dd_Smed_v6_9510_0_1, dd_Smed_v6_9510_0_1, [RH, Score=98.6, Expect=3e-23]} {RNA1509_15472} {RNA1310_12442, RNA1509_15472} {RNA1509_15472, RNA815_8851.2}

Mlig455_059935 {REF} {Length: 2017} {TRANSSPLICED} {Pfam: Pre-mRNA-splicing factor of RES complex [PF09736.11, score=103.4]} {Human: ENSG00000137656, BUD13, BUD13 homolog, [RH, Score=121, Expect=1e-28]} {Mouse: ENSMUSG00000032077, Bud13, BUD13 homolog, [RH, Score=114, Expect=3e-26]} {Dmel: FBgn0039210, CG13625, [RH, Score=181, Expect=6e-49]} {Celegans: WBGene00011142, R08D7.1, BUD13 homolog, [RH, Score=132, Expect=4e-33]} {Smed: dd_Smed_v6_9510_0_1, dd_Smed_v6_9510_0_1, [RH, Score=98.2, Expect=3e-23]} {RNA1509_15472} {RNA1310_12442} {RNA815_8851.2}
4. MligTC455_43803 1403 29.22 Mlig455_024433

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.253

 SF1 0.968 - - - 0.968 - - Mlig455_024433 {REF} {Length: 2175} {TRANSSPLICED} {Pfam: Splicing factor 1 helix-hairpin domain [PF16275.7, score=129.6]; KH domain [PF00013.31, score=36.4]; Zinc knuckle [PF00098.25, score=25.0]} {Human: ENSG00000168066, SF1, splicing factor 1, [RH, Score=369, Expect=4e-120]} {Mouse: ENSMUSG00000024949, Sf1, splicing factor 1, [RH, Score=369, Expect=2e-120]; ENSMUSG00000106722, Sf1, splicing factor 1, [RH, Score=369, Expect=2e-120]} {Dmel: FBgn0025571, SF1, Splicing factor 1, [RH, Score=388, Expect=2e-126]} {Celegans: WBGene00001595, gld-1, Female germline-specific tumor suppressor gld-1, [Score=108, Expect=3e-25]} {Smed: dd_Smed_v6_9172_0_1, dd_Smed_v6_9172_0_1, [RH, Score=282, Expect=9e-91]} {RNA1509_4122} {RNA1310_11033.1, RNA1509_4122} {RNA1509_4122, RNA815_13409}
5. MligTC455_24748 687 14.31 Mlig455_015955

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.392

Region-enriched R4: 1.134/0.03886

 SAP18 0.953 - - - - - 0.953 Mlig455_015955 {REF} {Length: 1990} {TRANSSPLICED} {Pfam: Sin3 associated polypeptide p18 (SAP18) [PF06487.14, score=138.7]} {Human: ENSG00000150459, SAP18, Sin3A associated protein 18, [RH, Score=160, Expect=1e-49]} {Mouse: ENSMUSG00000021963, Sap18, Sin3-associated polypeptide 18, [RH, Score=161, Expect=3e-50]; ENSMUSG00000061104, Sap18b, Sin3-associated polypeptide 18B, [RH, Score=161, Expect=3e-50]} {Dmel: FBgn0024491, Bin1, Bicoid interacting protein 1, [RH, Score=176, Expect=2e-56]} {Celegans: WBGene00007625, C16C10.4, Probable histone deacetylase complex subunit SAP18, [RH, Score=139, Expect=9e-42]} {Smed: dd_Smed_v6_3735_0_1, dd_Smed_v6_3735_0_1, [RH, Score=155, Expect=1e-48]} {RNA1509_13828, RNA1509_36271} {RNA1310_43343, RNA1509_36271} {RNA1509_36271, RNA815_22022.2}
6. MligTC455_29425 1662 34.63 Mlig455_024071

Neo: -

Age: -

Regeneration-upregulated R6: 1.829

Regeneration-enriched R6: 1.829

 GCN1 0.951 - - - 0.951 - - Mlig455_024071 {REF} {Length: 8504} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=109.6]; CLASP N terminal [PF12348.10, score=75.9]; HEAT repeats [PF13646.8, score=72.0]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=49.6]; Vacuolar 14 Fab1-binding region [PF12755.9, score=44.4]; RNAPII transcription regulator C-terminal [PF12460.10, score=38.0]; UME (NUC010) domain [PF08064.15, score=30.4]; HEAT-like repeat [PF13513.8, score=29.4]; Dopey, N-terminal [PF04118.16, score=22.0]; Adaptin N terminal region [PF01602.22, score=21.9]; Interferon-related developmental regulator (IFRD) [PF05004.15, score=21.1]} {Human: ENSG00000089154, GCN1, GCN1, eIF2 alpha kinase activator homolog, [Score=1230, Expect=0.0]} {Mouse: ENSMUSG00000041638, Gcn1l1, GCN1 general control of amino-acid synthesis 1-like 1 (yeast), [RH, Score=1322, Expect=0.0]} {Dmel: FBgn0039959, CG17514, [RH, Score=1229, Expect=0.0]} {Celegans: WBGene00021697, gcn-1, GCN (Yeast General Control Nondrepressible) homolog, [RH, Score=919, Expect=0.0]} {Smed: dd_Smed_v6_3929_0_1, dd_Smed_v6_3929_0_1, [RH, Score=937, Expect=0.0]} {RNA1509_2095, RNA1509_21822, RNA1509_24849, RNA1509_9007} {RNA1310_102.1, RNA1509_21822, RNA1509_24849, RNA1509_9007} {RNA1509_21822, RNA1509_24849, RNA1509_9007, RNA815_83}
7. MligTC455_22253 696 14.5 Mlig455_039989

Neo: -

Age: -

 H2AFY 0.95 - 0.950 - - - - Mlig455_039989 {REF} {Length: 2087} {TRANSSPLICED} {Pfam: Macro domain [PF01661.23, score=74.1]; C-terminus of histone H2A [PF16211.7, score=47.3]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=33.0]} {Human: ENSG00000113648, H2AFY, H2A histone family member Y, [RH, Score=280, Expect=4e-91]} {Mouse: ENSMUSG00000015937, H2afy, H2A histone family, member Y, [RH, Score=280, Expect=3e-91]} {Dmel: FBgn0053853, His2A:CG33853, [Score=125, Expect=5e-35]} {Celegans: WBGene00001909, his-35, Histone H2A, [Score=118, Expect=2e-32]} {Smed: dd_Smed_v6_4487_0_1, dd_Smed_v6_4487_0_1, [RH, Score=241, Expect=2e-76]} {RNA1509_21701} {RNA1310_14229, RNA1509_21701} {RNA1509_21701, RNA815_13070}

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