M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_22253

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_22253 696 14.50 Mlig455_039989

Neo: -

Age: -

 H2AFY Mlig455_039989 {REF} {Length: 2087} {TRANSSPLICED} {Pfam: Macro domain [PF01661.23, score=74.1]; C-terminus of histone H2A [PF16211.7, score=47.3]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=33.0]} {Human: ENSG00000113648, H2AFY, H2A histone family member Y, [RH, Score=280, Expect=4e-91]} {Mouse: ENSMUSG00000015937, H2afy, H2A histone family, member Y, [RH, Score=280, Expect=3e-91]} {Dmel: FBgn0053853, His2A:CG33853, [Score=125, Expect=5e-35]} {Celegans: WBGene00001909, his-35, Histone H2A, [Score=118, Expect=2e-32]} {Smed: dd_Smed_v6_4487_0_1, dd_Smed_v6_4487_0_1, [RH, Score=241, Expect=2e-76]} {RNA1509_21701} {RNA1310_14229, RNA1509_21701} {RNA1509_21701, RNA815_13070}

Cumulative graph for MligTC455_22253

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.151 4.248 0.89823 1.00000
RegionR2 1.213 4.248 0.00570 0.06997
RegionR3 0.181 4.248 0.61110 1.00000
RegionR4 -0.123 4.248 0.78765 1.00000
RegionR5 0.702 4.248 0.02180 0.10319
RegionR6 -0.063 4.248 0.87025 1.00000
RegionR7 -0.47 4.248 0.38997 1.00000
RegionR8 -1.289 4.248 0.09909 0.59157

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.674 4.248 0.13071 0.86315
RegenerationR2 0.091 4.248 0.77156 0.98081
RegenerationR3 0.282 4.248 0.46770 0.84236
RegenerationR4 0.243 4.248 0.55062 0.89312
RegenerationR5 -0.544 4.248 0.11676 0.51365
RegenerationR6 0.266 4.248 0.50643 0.81069
RegenerationBL 1.214 4.248 0.01954 0.15084
RegenerationTP 0.416 4.248 0.53379 0.92313


Genes with expression patterns similar to MligTC455_22253

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_22253 696 14.5 Mlig455_039989

Neo: -

Age: -

 H2AFY 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_039989 {REF} {Length: 2087} {TRANSSPLICED} {Pfam: Macro domain [PF01661.23, score=74.1]; C-terminus of histone H2A [PF16211.7, score=47.3]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=33.0]} {Human: ENSG00000113648, H2AFY, H2A histone family member Y, [RH, Score=280, Expect=4e-91]} {Mouse: ENSMUSG00000015937, H2afy, H2A histone family, member Y, [RH, Score=280, Expect=3e-91]} {Dmel: FBgn0053853, His2A:CG33853, [Score=125, Expect=5e-35]} {Celegans: WBGene00001909, his-35, Histone H2A, [Score=118, Expect=2e-32]} {Smed: dd_Smed_v6_4487_0_1, dd_Smed_v6_4487_0_1, [RH, Score=241, Expect=2e-76]} {RNA1509_21701} {RNA1310_14229, RNA1509_21701} {RNA1509_21701, RNA815_13070}
2. MligTC455_42884 804 16.76 Mlig455_014074

Neo: -

Age: -

 3.398 - 0.786 0.818 0.954 - 0.840 Mlig455_014074 {REF} {Length: 1103} {TRANSSPLICED} {Pfam: Riboflavin kinase [PF01687.19, score=93.9]} {Dmel: FBgn0014930, CG2846, [RH, Score=65.5, Expect=9e-14]} {Celegans: WBGene00011224, R10H10.6, [RH, Score=75.9, Expect=5e-18]} {RNA1509_37619} {RNA1310_19341} {RNA815_8291}
3. MligTC455_46850 265 5.52 Mlig455_005746

Neo: -

Age: -

Region-enriched R4: 2.659/0.01708

 3.227 - - 0.774 0.969 0.753 0.731 Mlig455_005746 {REF} {Length: 3392} {Pfam: Coiled-coil domain-containing protein 158 [PF15921.7, score=48.5]} {Mouse: ENSMUSG00000050050, Ccdc158, coiled-coil domain containing 158, [RH, Score=84.7, Expect=3e-16]} {Smed: dd_Smed_v6_10831_0_1, dd_Smed_v6_10831_0_1, [RH, Score=68.9, Expect=1e-11]} {RNA1509_46369, RNA1509_7522} {RNA1310_3662, RNA1509_46369, RNA1509_7522} {RNA1509_46369, RNA1509_7522, RNA815_5689}
4. MligTC455_46066 842 17.54 Mlig455_021428, Mlig455_067222

Neo: -

Age: -

 2.693 0.846 - - 0.888 0.959 -

Mlig455_021428 {REF} {Length: 2125} {TRANSSPLICED} {RNA1509_16610} {RNA1310_5648.3} {RNA815_3911}

Mlig455_067222 {REF} {Length: 2219} {TRANSSPLICED} {RNA1509_16610, RNA1509_38845} {RNA1310_5648.2, RNA1509_16610, RNA1509_38845} {RNA1509_16610, RNA1509_38845, RNA815_3911}
5. MligTC455_21232 518 10.79 Mlig455_003729, Mlig455_003893

Neo: -

Age: -

 RP1 2.624 - - 0.814 0.854 0.956 -

Mlig455_003729 {REF} {Length: 9766} {TRANSSPLICED} {Pfam: PLAT/LH2 domain [PF01477.25, score=241.2]} {Human: ENSG00000104237, RP1, RP1, axonemal microtubule associated, [Score=465, Expect=2e-138]} {Mouse: ENSMUSG00000025900, Rp1, retinitis pigmentosa 1 (human), [Score=433, Expect=2e-125]} {Dmel: FBgn0035229, pns, pinstripe, [Score=61.2, Expect=1e-08]} {Smed: dd_Smed_v6_10315_0_1, dd_Smed_v6_10315_0_1, [Score=583, Expect=6e-178]} {RNA1509_11896, RNA1509_36099, RNA1509_38002, RNA1509_45398} {RNA1310_1638, RNA1509_36099, RNA1509_38002, RNA1509_45398} {RNA1509_36099, RNA1509_38002, RNA1509_45398, RNA815_162}

Mlig455_003893 {REF} {Length: 9769} {TRANSSPLICED} {Pfam: PLAT/LH2 domain [PF01477.25, score=245.2]} {Human: ENSG00000104237, RP1, RP1, axonemal microtubule associated, [Score=469, Expect=1e-139]} {Mouse: ENSMUSG00000025900, Rp1, retinitis pigmentosa 1 (human), [Score=437, Expect=1e-126]} {Dmel: FBgn0035229, pns, pinstripe, [Score=61.2, Expect=1e-08]} {Smed: dd_Smed_v6_10315_0_2, dd_Smed_v6_10315_0_2, [Score=591, Expect=0.0]} {RNA1509_11896, RNA1509_54254} {RNA1310_1638, RNA1509_54254} {RNA1509_54254, RNA815_162}
6. MligTC455_31727 319 6.64 Mlig455_052802

Neo: -

Age: -

Region-enriched R2: 1.942/0.03690

 BBS7 2.588 0.871 - - - 0.766 0.951 Mlig455_052802 {REF} {Length: 3681} {TRANSSPLICED} {Pfam: Ciliary BBSome complex subunit 2, middle region [PF14783.8, score=24.7]; FG-GAP-like repeat [PF13517.8, score=19.2]} {Human: ENSG00000138686, BBS7, Bardet-Biedl syndrome 7, [RH, Score=736, Expect=0.0]} {Mouse: ENSMUSG00000037325, Bbs7, Bardet-Biedl syndrome 7 (human), [RH, Score=730, Expect=0.0]} {Celegans: WBGene00003892, osm-12, Bardet-Biedl syndrome 7 protein homolog, [RH, Score=395, Expect=1e-127]} {Smed: dd_Smed_v6_15015_0_1, dd_Smed_v6_15015_0_1, [RH, Score=645, Expect=0.0]} {RNA1509_7138} {RNA1310_7894, RNA1509_7138} {RNA1509_7138, RNA815_2924}
7. MligTC455_50915 531 11.06 Mlig455_028745

Neo: -

Age: Up-Down-Down

Region-enriched R2: 2.109/0.02468

 DNHD1 2.577 - - - 0.951 0.901 0.725 Mlig455_028745 {REF} {Length: 14999} {TRANSSPLICED} {Pfam: Dynein heavy chain, N-terminal region 2 [PF08393.15, score=214.3]; Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=113.4]; P-loop containing dynein motor region D4 [PF12780.9, score=60.1]; Microtubule-binding stalk of dynein motor [PF12777.9, score=55.6]; P-loop containing dynein motor region [PF12775.9, score=49.4]; Dynein heavy chain C-terminal domain [PF18199.3, score=44.7]; Dynein heavy chain AAA lid domain [PF17852.3, score=40.5]; AAA domain [PF13401.8, score=23.5]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=22.3]; Dynein heavy chain AAA lid domain [PF18198.3, score=22.0]; Protein of unknown function (DUF815) [PF05673.15, score=21.1]; AAA domain [PF13604.8, score=18.7]} {Human: ENSG00000179532, DNHD1, dynein heavy chain domain 1, [Score=157, Expect=4e-37]} {Mouse: ENSMUSG00000030882, Dnhd1, dynein heavy chain domain 1, [Score=249, Expect=8e-65]} {Dmel: FBgn0013811, Dhc62B, Dynein heavy chain at 62B, [Score=114, Expect=2e-24]} {Celegans: WBGene00000485, che-3, Cytoplasmic dynein 2 heavy chain 1, [Score=84.0, Expect=4e-15]} {Smed: dd_Smed_v6_8984_0_1, dd_Smed_v6_8984_0_1, [RH, Score=443, Expect=5e-124]} {RNA1509_1896} {RNA1310_31, RNA1509_1896} {RNA1509_1896, RNA815_1203}
8. MligTC455_52848 1004 20.93 Mlig455_018091

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R2: 1.394/0.01138

Regeneration-upregulated BL: 1.617

Regeneration-enriched BL: 1.617

 TRIP12 2.509 - - 0.951 - 0.785 0.773 Mlig455_018091 {REF} {Length: 8229} {TRANSSPLICED} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=254.0]; WWE domain [PF02825.22, score=52.4]} {Human: ENSG00000153827, TRIP12, thyroid hormone receptor interactor 12, [Score=386, Expect=1e-107]} {Mouse: ENSMUSG00000026219, Trip12, thyroid hormone receptor interactor 12, [Score=379, Expect=7e-106]} {Dmel: FBgn0260794, ctrip, circadian trip, [Score=294, Expect=2e-79]} {Celegans: WBGene00016405, hecd-1, HECtD1 ubiquitin ligase homolog, [Score=232, Expect=9e-61]} {Smed: dd_Smed_v6_2525_0_2, dd_Smed_v6_2525_0_2, [Score=334, Expect=4e-92]} {RNA1509_25029, RNA1509_54642, RNA1509_8128} {RNA1310_1316.1, RNA1509_25029, RNA1509_54642} {RNA1509_25029, RNA1509_54642, RNA815_9388}
9. MligTC455_50914 714 14.87 Mlig455_005873

Neo: -

Age: -

Region-enriched R2: 2.125/0.01399

 DNHD1 1.866 - - - 0.956 0.910 - Mlig455_005873 {REF} {Length: 14506} {Pfam: Dynein heavy chain, N-terminal region 2 [PF08393.15, score=207.8]; Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=114.3]; P-loop containing dynein motor region D4 [PF12780.9, score=60.3]; Microtubule-binding stalk of dynein motor [PF12777.9, score=54.5]; P-loop containing dynein motor region [PF12775.9, score=46.5]; Dynein heavy chain C-terminal domain [PF18199.3, score=42.8]; Dynein heavy chain AAA lid domain [PF17852.3, score=38.9]; AAA domain [PF13401.8, score=22.7]; Dynein heavy chain AAA lid domain [PF18198.3, score=22.0]; Protein of unknown function (DUF815) [PF05673.15, score=20.3]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=19.7]} {Human: ENSG00000179532, DNHD1, dynein heavy chain domain 1, [Score=159, Expect=1e-37]} {Mouse: ENSMUSG00000030882, Dnhd1, dynein heavy chain domain 1, [Score=177, Expect=3e-43]} {Dmel: FBgn0013811, Dhc62B, Dynein heavy chain at 62B, [Score=114, Expect=4e-24]} {Celegans: WBGene00000485, che-3, Cytoplasmic dynein 2 heavy chain 1, [Score=82.0, Expect=1e-14]} {Smed: dd_Smed_v6_8984_0_1, dd_Smed_v6_8984_0_1, [Score=331, Expect=5e-90]} {RNA1509_32900} {RNA1310_31} {RNA815_1203}
10. MligTC455_23641 561 11.68 Mlig455_034290

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.478

 STK33 1.838 - - - 0.880 0.958 - Mlig455_034290 {REF} {Length: 2597} {Pfam: Protein kinase domain [PF00069.27, score=207.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=137.0]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=21.9]} {Human: ENSG00000130413, STK33, serine/threonine kinase 33, [Score=186, Expect=2e-54]} {Mouse: ENSMUSG00000031027, Stk33, serine/threonine kinase 33, [Score=193, Expect=4e-57]} {Dmel: FBgn0026063, KP78b, [Score=141, Expect=3e-37]} {Celegans: WBGene00009326, F32D8.1, [Score=129, Expect=2e-34]} {Smed: dd_Smed_v6_12461_0_1, dd_Smed_v6_12461_0_1, [RH, Score=232, Expect=4e-74]} {RNA1509_36009} {RNA1310_11665} {RNA815_6928}
11. MligTC455_31296 390 8.12 Mlig455_011781

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.545

 1.798 - - - 0.848 0.950 - Mlig455_011781 {REF} {Length: 941} {RNA1509_29951} {RNA1310_14610.1} {RNA815_17373}
12. MligTC455_12986 520 10.83 Mlig455_053026

Neo: -

Age: -

 LOXHD1 1.787 - - - 0.826 0.961 - Mlig455_053026 {REF} {Length: 4034} {Pfam: PLAT/LH2 domain [PF01477.25, score=112.3]} {Human: ENSG00000167210, LOXHD1, lipoxygenase homology domains 1, [Score=93.6, Expect=2e-18]} {Mouse: ENSMUSG00000032818, Loxhd1, lipoxygenase homology domains 1, [Score=89.7, Expect=2e-17]} {Smed: dd_Smed_v6_10460_0_1, dd_Smed_v6_10460_0_1, [Score=108, Expect=1e-23]} {RNA1509_6796} {RNA1310_2867.1} {RNA815_966}
13. MligTC455_54127 156 3.25 Mlig455_063724

Neo: -

Age: -

 SPEF1 1.78 - - - 0.971 0.809 - Mlig455_063724 {REF} {Length: 1293} {TRANSSPLICED} {Pfam: CH-like domain in sperm protein [PF06294.13, score=114.7]; CAMSAP CH domain [PF11971.10, score=53.6]} {Human: ENSG00000101222, SPEF1, sperm flagellar 1, [RH, Score=171, Expect=1e-52]} {Mouse: ENSMUSG00000027329, Spef1, sperm flagellar 1, [RH, Score=178, Expect=2e-55]} {Dmel: FBgn0030722, CG12395, [Score=67.4, Expect=5e-13]} {Smed: dd_Smed_v6_5648_0_1, dd_Smed_v6_5648_0_1, [RH, Score=273, Expect=2e-93]} {RNA1509_48542} {RNA1310_25346.1, RNA1509_48542} {RNA1509_48542, RNA815_11607}
14. MligTC455_49257 739 15.4 Mlig455_033298

Neo: -

Age: -

 MFHAS1 1.77 - - - 0.969 0.801 - Mlig455_033298 {REF} {Length: 1564} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=64.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=44.5]; Leucine-rich repeat [PF14580.8, score=29.1]} {Human: ENSG00000147324, MFHAS1, malignant fibrous histiocytoma amplified sequence 1, [Score=102, Expect=4e-23]; ENSG00000285022, AC270282.1, malignant fibrous histiocytoma amplified sequence 1, [Score=102, Expect=4e-23]} {Mouse: ENSMUSG00000070056, Mfhas1, malignant fibrous histiocytoma amplified sequence 1, [Score=94.7, Expect=1e-20]} {Dmel: FBgn0263289, scrib, scribbled, [Score=87.8, Expect=2e-18]} {Celegans: WBGene00004929, soc-2, Leucine-rich repeat protein soc-2, [Score=85.1, Expect=8e-18]} {Smed: dd_Smed_v6_11443_0_1, dd_Smed_v6_11443_0_1, [RH, Score=102, Expect=7e-25]} {RNA1509_32286, RNA1509_43570} {RNA1310_22536.1, RNA1509_32286, RNA1509_43570} {RNA1509_32286, RNA1509_43570, RNA815_11933}
15. MligTC455_49067 1176 24.5 Mlig455_040676, Mlig455_064541

Neo: -

Age: logFC(26M/2M)=-0.241

 1.741 0.777 - - 0.964 - -

Mlig455_040676 {REF} {Length: 3487} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4207) [PF13904.8, score=33.3]} {RNA1509_5459} {RNA1310_5182} {RNA815_5673}

Mlig455_064541 {REF} {Length: 3584} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4207) [PF13904.8, score=30.4]} {RNA1509_5459} {RNA1310_5182, RNA1509_5459} {RNA1509_5459, RNA815_5673}
16. MligTC455_43767 1310 27.29 Mlig455_048807

Neo: -

Age: Down-Down-Up

 EFHB 1.732 - - - 0.968 0.764 - Mlig455_048807 {REF} {Length: 2201} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=45.4]; EF hand [PF00036.34, score=42.2]; EF-hand domain [PF13405.8, score=40.2]; Family of unknown function (DUF5580) [PF17743.3, score=32.2]; EF hand [PF13202.8, score=31.1]; EF-hand domain pair [PF13833.8, score=18.8]} {Human: ENSG00000163576, EFHB, EF-hand domain family member B, [RH, Score=386, Expect=1e-125]} {Mouse: ENSMUSG00000023931, Efhb, EF hand domain family, member B, [RH, Score=359, Expect=7e-114]} {Dmel: FBgn0004910, Eip63F-1, Ecdysone-induced protein 63F 1, [Score=53.1, Expect=6e-08]} {Celegans: WBGene00000286, cal-2, CALmodulin related genes; Calmodulin-like protein, [Score=52.8, Expect=7e-08]} {Smed: dd_Smed_v6_11909_0_1, dd_Smed_v6_11909_0_1, [RH, Score=351, Expect=3e-114]} {RNA1509_2205} {RNA1310_7693} {RNA815_3913}
17. MligTC455_47216 803 16.72 Mlig455_052798

Neo: -

Age: -

 1.709 - - - 0.756 0.953 - Mlig455_052798 {REF} {Length: 4690} {TRANSSPLICED} {Pfam: Arginine/serine-rich protein PNISR [PF15996.7, score=44.6]} {RNA1509_22491} {RNA1310_7215.1, RNA1509_22491} {RNA1509_22491, RNA815_6578.1}
18. MligTC455_44640 1401 29.18 Mlig455_035983

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=0.952

 1.707 - - - 0.753 0.954 - Mlig455_035983 {REF} {Length: 2336} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=80.8]} {RNA1509_39912, RNA1509_43112} {RNA1310_34469, RNA1509_39912, RNA1509_43112} {RNA1509_39912, RNA1509_43112, RNA815_15853}
19. MligTC455_20138 552 11.5 Mlig455_025065

Neo: -

Age: -

 C10orf67 1.654 - - - 0.950 0.704 - Mlig455_025065 {REF} {Length: 2730} {Human: ENSG00000179133, C10orf67, chromosome 10 open reading frame 67, [Score=62.0, Expect=1e-09]} {Mouse: ENSMUSG00000026734, 4921504E06Rik, RIKEN cDNA 4921504E06 gene, [RH, Score=58.9, Expect=6e-09]} {RNA1509_39095} {RNA1310_11849} {RNA815_12876}
20. MligTC455_20139 549 11.45 Mlig455_025080

Neo: -

Age: logFC(26M/2M)=-0.355

 C10orf67 1.654 - - - 0.951 0.703 - Mlig455_025080 {REF} {Length: 2190} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4709) [PF15821.7, score=70.4]} {Human: ENSG00000179133, C10orf67, chromosome 10 open reading frame 67, [RH, Score=96.7, Expect=2e-20]} {Mouse: ENSMUSG00000026734, 4921504E06Rik, RIKEN cDNA 4921504E06 gene, [RH, Score=59.7, Expect=7e-09]} {RNA1509_11167, RNA1509_39095} {RNA1310_11849, RNA1509_11167, RNA1509_39095} {RNA1509_11167, RNA1509_39095, RNA815_12876}
21. MligTC455_50361 844 17.58 Mlig455_000622

Neo: -

Age: Down-Up-Down

 DUSP22 0.979 - - - 0.979 - - Mlig455_000622 {REF} {Length: 2298} {TRANSSPLICED} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=89.4]} {Human: ENSG00000112679, DUSP22, dual specificity phosphatase 22, [RH, Score=119, Expect=1e-32]} {Mouse: ENSMUSG00000069255, Dusp22, dual specificity phosphatase 22, [RH, Score=120, Expect=3e-33]} {Dmel: FBgn0036369, CG10089, [RH, Score=103, Expect=6e-25]} {Celegans: WBGene00006923, vhp-1, Tyrosine-protein phosphatase vhp-1, [Score=86.3, Expect=6e-19]} {Smed: dd_Smed_v6_4044_0_1, dd_Smed_v6_4044_0_1, [RH, Score=110, Expect=1e-28]} {RNA1509_21493, RNA1509_48380} {RNA1310_34562, RNA1509_21493, RNA1509_48380} {RNA1509_21493, RNA1509_48380, RNA815_16504}
22. MligTC455_45179 4166 86.78 Mlig455_048432

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.401

 CFAP20 0.974 - - - 0.974 - - Mlig455_048432 {REF} {Length: 1648} {Pfam: Protein of unknown function (DUF667) [PF05018.15, score=310.7]} {Human: ENSG00000070761, CFAP20, cilia and flagella associated protein 20, [RH, Score=367, Expect=4e-131]} {Mouse: ENSMUSG00000031796, Cfap20, cilia and flagella associated protein 20, [RH, Score=370, Expect=2e-132]} {Dmel: FBgn0032248, Bug22, Basal body up regulated gene 22, [RH, Score=368, Expect=9e-132]} {Celegans: WBGene00008288, C54C6.6, Cilia- and flagella-associated protein 20, [RH, Score=345, Expect=1e-122]} {Smed: dd_Smed_v6_4843_0_1, dd_Smed_v6_4843_0_1, [RH, Score=362, Expect=2e-129]} {RNA1509_1898} {RNA1310_20376.1} {RNA815_8129.1}
23. MligTC455_35664 1772 36.91 Mlig455_020393, Mlig455_028392, Mlig455_058437

Neo: -

Age: logFC(26M/2M)=-0.217

Region-enriched R4: 1.033/0.04115

 CLHC1 0.966 - - - - 0.966 -

Mlig455_020393 {REF} {Length: 1999} {Pfam: Translin-associated factor X-interacting N-terminus [PF15739.7, score=57.3]; Clathrin-H-link [PF13838.8, score=34.4]} {Human: ENSG00000162994, CLHC1, clathrin heavy chain linker domain containing 1, [RH, Score=155, Expect=8e-40]} {Mouse: ENSMUSG00000020461, Clhc1, clathrin heavy chain linker domain containing 1, [RH, Score=160, Expect=8e-42]} {Celegans: WBGene00011867, chc-1, Probable clathrin heavy chain 1, [Score=51.2, Expect=2e-06]} {Smed: dd_Smed_v6_9605_0_1, dd_Smed_v6_9605_0_1, [RH, Score=145, Expect=4e-37]} {RNA1509_8364} {RNA1310_5794.1} {RNA815_1706}

Mlig455_028392 {REF} {Length: 1994} {TRANSSPLICED} {Pfam: Clathrin-H-link [PF13838.8, score=35.7]} {Human: ENSG00000162994, CLHC1, clathrin heavy chain linker domain containing 1, [Score=110, Expect=4e-25]} {Mouse: ENSMUSG00000047126, Cltc, clathrin, heavy polypeptide (Hc), [Score=54.7, Expect=3e-07]} {Celegans: WBGene00011867, chc-1, Probable clathrin heavy chain 1, [Score=50.4, Expect=3e-06]} {Smed: dd_Smed_v6_9605_0_1, dd_Smed_v6_9605_0_1, [Score=114, Expect=1e-26]} {RNA1509_8364} {RNA1310_5794.1} {RNA815_1706}

Mlig455_058437 {REF} {Length: 2088} {Pfam: Translin-associated factor X-interacting N-terminus [PF15739.7, score=57.4]; Clathrin-H-link [PF13838.8, score=34.4]} {Human: ENSG00000162994, CLHC1, clathrin heavy chain linker domain containing 1, [Score=153, Expect=3e-39]} {Mouse: ENSMUSG00000020461, Clhc1, clathrin heavy chain linker domain containing 1, [Score=158, Expect=4e-41]} {Celegans: WBGene00011867, chc-1, Probable clathrin heavy chain 1, [Score=50.8, Expect=3e-06]} {Smed: dd_Smed_v6_9605_0_1, dd_Smed_v6_9605_0_1, [Score=144, Expect=9e-37]} {RNA1509_8364} {RNA1310_5794.1} {RNA815_1706}
24. MligTC455_17592 62 1.28 Mlig455_003740

Neo: -

Age: -

Regeneration-downregulated R2: -3.050

Regeneration-depleted R2: -3.050

 PCIF1 0.964 - - - - 0.964 - Mlig455_003740 {REF} {Length: 2838} {TRANSSPLICED} {Pfam: Phosphorylated CTD interacting factor 1 WW domain [PF12237.10, score=224.4]; WW domain [PF00397.28, score=40.5]} {Human: ENSG00000100982, PCIF1, PDX1 C-terminal inhibiting factor 1, [RH, Score=567, Expect=0.0]} {Mouse: ENSMUSG00000039849, Pcif1, PDX1 C-terminal inhibiting factor 1, [RH, Score=560, Expect=0.0]} {Dmel: FBgn0037021, CG11399, [RH, Score=535, Expect=4e-179]} {Smed: dd_Smed_v6_9161_0_1, dd_Smed_v6_9161_0_1, [RH, Score=459, Expect=9e-153]} {RNA1509_12189} {RNA1310_4645} {RNA815_2873.1}
25. MligTC455_41392 1282 26.7 Mlig455_017725

Neo: -

Age: -

 CDC14A 0.963 - - - 0.963 - - Mlig455_017725 {REF} {Length: 4406} {Pfam: Dual specificity protein phosphatase, N-terminal half [PF14671.8, score=196.0]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=47.5]; Protein-tyrosine phosphatase [PF00102.29, score=22.3]; Inositol hexakisphosphate [PF14566.8, score=21.8]} {Human: ENSG00000079335, CDC14A, cell division cycle 14A, [RH, Score=554, Expect=0.0]} {Mouse: ENSMUSG00000033502, Cdc14a, CDC14 cell division cycle 14A, [RH, Score=546, Expect=0.0]} {Dmel: FBgn0031952, cdc14, cell division cycle 14, [RH, Score=451, Expect=4e-147]} {Celegans: WBGene00000383, cdc-14, Cell Division Cycle related, [RH, Score=355, Expect=3e-114]} {Smed: dd_Smed_v6_7798_0_1, dd_Smed_v6_7798_0_1, [RH, Score=556, Expect=0.0]} {RNA1509_1975} {RNA1310_7304, RNA1509_1975} {RNA1509_1975, RNA815_1133}
26. MligTC455_37017 345 7.2 Mlig455_035238

Neo: -

Age: -

 0.96 - - - - - 0.960 Mlig455_035238 {REF} {Length: 1969} {TRANSSPLICED} {Pfam: Profilin [PF00235.21, score=70.1]} {Celegans: WBGene00003991, pfn-3, Profilin-3, [Score=50.4, Expect=9e-09]} {RNA1509_18199, RNA1509_28431} {RNA1310_37032.1, RNA1509_28431} {RNA1509_28431, RNA815_15418}
27. MligTC455_40057 612 12.75 Mlig455_054931

Neo: -

Age: -

 FADS1 0.96 - - - 0.960 - - Mlig455_054931 {REF} {Length: 2003} {Pfam: Fatty acid desaturase [PF00487.26, score=114.0]; Cytochrome b5-like Heme/Steroid binding domain [PF00173.30, score=63.0]} {Human: ENSG00000149485, FADS1, fatty acid desaturase 1, [Score=414, Expect=2e-141]; ENSG00000134824, FADS2, fatty acid desaturase 2, [Score=410, Expect=1e-140]} {Mouse: ENSMUSG00000024665, Fads2, fatty acid desaturase 2, [Score=417, Expect=2e-143]; ENSMUSG00000010663, Fads1, fatty acid desaturase 1, [Score=402, Expect=1e-137]} {Dmel: FBgn0036575, CG5157, [Score=50.8, Expect=9e-08]} {Celegans: WBGene00001396, fat-4, Delta(5) fatty acid desaturase fat-4, [RH, Score=129, Expect=1e-33]} {Smed: dd_Smed_v6_10869_0_1, dd_Smed_v6_10869_0_1, [RH, Score=481, Expect=2e-169]} {RNA1509_36781} {RNA1310_14458, RNA1509_36781} {RNA1509_36781, RNA815_5784}
28. MligTC455_41393 1315 27.39 Mlig455_056178

Neo: -

Age: logFC(26M/2M)=-0.489

 CDC14A 0.959 - - - 0.959 - - Mlig455_056178 {REF} {Length: 4272} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=47.5]; Protein-tyrosine phosphatase [PF00102.29, score=22.8]; Inositol hexakisphosphate [PF14566.8, score=22.1]} {Human: ENSG00000079335, CDC14A, cell division cycle 14A, [Score=327, Expect=5e-106]; ENSG00000081377, CDC14B, cell division cycle 14B, [Score=313, Expect=6e-102]} {Mouse: ENSMUSG00000033502, Cdc14a, CDC14 cell division cycle 14A, [Score=325, Expect=2e-105]; ENSMUSG00000033102, Cdc14b, CDC14 cell division cycle 14B, [Score=310, Expect=3e-100]} {Dmel: FBgn0031952, cdc14, cell division cycle 14, [Score=275, Expect=8e-85]} {Celegans: WBGene00000383, cdc-14, Cell Division Cycle related, [Score=271, Expect=1e-83]} {Smed: dd_Smed_v6_7798_0_2, dd_Smed_v6_7798_0_2, [Score=334, Expect=7e-108]} {RNA1509_13598, RNA1509_1975, RNA1509_21888} {RNA1310_7304, RNA1509_13598, RNA1509_21888} {RNA1509_13598, RNA1509_21888, RNA815_1133}
29. MligTC455_41299 378 7.87 Mlig455_020176

Neo: -

Age: -

 CLK2 0.958 - - - - 0.958 - Mlig455_020176 {REF} {Length: 2938} {Pfam: Protein kinase domain [PF00069.27, score=156.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=83.4]} {Human: ENSG00000176444, CLK2, CDC like kinase 2, [RH, Score=470, Expect=4e-159]; ENSG00000261893, CLK2, CDC like kinase 2, [RH, Score=470, Expect=4e-159]; ENSG00000179335, CLK3, CDC like kinase 3, [RH, Score=450, Expect=4e-149]} {Mouse: ENSMUSG00000068917, Clk2, CDC-like kinase 2, [RH, Score=473, Expect=4e-160]} {Dmel: FBgn0265998, Doa, Darkener of apricot, [RH, Score=495, Expect=6e-155]} {Celegans: WBGene00006517, madd-3, [RH, Score=439, Expect=2e-142]} {Smed: dd_Smed_v6_8461_0_1, dd_Smed_v6_8461_0_1, [RH, Score=530, Expect=2e-179]} {RNA1509_12578} {RNA1310_7050, RNA1509_12578} {RNA1509_12578, RNA815_3787}
30. MligTC455_46105 652 13.57 Mlig455_027973

Neo: Irradiation

Age: -

Region-enriched R5: 1.491/0.00022

 0.957 - 0.957 - - - - Mlig455_027973 {REF} {Length: 2313} {TRANSSPLICED} {RNA1509_29186} {RNA1310_22571.3} {RNA815_23708.1}
31. MligTC455_35663 475 9.89 Mlig455_028426

Neo: -

Age: -

 CLHC1 0.955 - - - - 0.955 - Mlig455_028426 {REF} {Length: 1005} {Pfam: Translin-associated factor X-interacting N-terminus [PF15739.7, score=57.3]; Clathrin-H-link [PF13838.8, score=34.4]} {Human: ENSG00000162994, CLHC1, clathrin heavy chain linker domain containing 1, [RH, Score=155, Expect=8e-40]} {Mouse: ENSMUSG00000020461, Clhc1, clathrin heavy chain linker domain containing 1, [RH, Score=160, Expect=8e-42]} {Celegans: WBGene00011867, chc-1, Probable clathrin heavy chain 1, [Score=51.2, Expect=2e-06]} {Smed: dd_Smed_v6_9605_0_1, dd_Smed_v6_9605_0_1, [RH, Score=145, Expect=4e-37]} {RNA1509_25530} {RNA1310_5794.1} {RNA815_1706}
32. MligTC455_44445 3546 73.87 Mlig455_057077

Neo: -

Age: logFC(26M/2M)=-0.194

 RSPH14 0.955 - - - 0.955 - - Mlig455_057077 {REF} {Length: 2215} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=49.1]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=45.3]; HEAT repeats [PF13646.8, score=44.9]; HEAT repeat [PF02985.24, score=40.1]; HEAT-like repeat [PF13513.8, score=38.6]; Adaptin N terminal region [PF01602.22, score=25.3]; Armadillo-like [PF04826.15, score=23.3]; Vacuolar 14 Fab1-binding region [PF12755.9, score=19.6]; TAF6 C-terminal HEAT repeat domain [PF07571.15, score=18.8]; Dos2-interacting transcription regulator of RNA-Pol-II [PF14500.8, score=18.2]} {Human: ENSG00000100218, RSPH14, radial spoke head 14 homolog, [RH, Score=224, Expect=3e-70]} {Mouse: ENSMUSG00000009070, Rsph14, radial spoke head homolog 14 (Chlamydomonas), [RH, Score=298, Expect=4e-99]} {Smed: dd_Smed_v6_1917_0_1, dd_Smed_v6_1917_0_1, [RH, Score=317, Expect=2e-107]} {RNA1509_3519} {RNA1310_27336, RNA1509_3519} {RNA1509_3519, RNA815_10090}
33. MligTC455_35568 2158 44.97 Mlig455_021702

Neo: -

Age: logFC(26M/2M)=-0.363

 CFAP44 0.952 - - - 0.952 - - Mlig455_021702 {REF} {Length: 6525} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=22.8]} {Human: ENSG00000206530, CFAP44, cilia and flagella associated protein 44, [RH, Score=1198, Expect=0.0]} {Mouse: ENSMUSG00000071550, Cfap44, cilia and flagella associated protein 44, [RH, Score=1139, Expect=0.0]} {Dmel: FBgn0083960, CG34124, [RH, Score=558, Expect=5e-165]} {Smed: dd_Smed_v6_8760_0_1, dd_Smed_v6_8760_0_1, [RH, Score=1665, Expect=0.0]} {RNA1509_22831} {RNA1310_539.1, RNA1509_22831} {RNA1509_22831, RNA815_87.1}
34. MligTC455_40485 354 7.37 Mlig455_043700, Mlig455_047453

Neo: -

Age: Down-Up-Down

 DOCK1 0.952 - - - - 0.952 -

Mlig455_043700 {REF} {Length: 5968} {Pfam: C2 domain in Dock180 and Zizimin proteins [PF14429.8, score=33.1]} {Human: ENSG00000150760, DOCK1, dedicator of cytokinesis 1, [Score=56.2, Expect=5e-07]} {Mouse: ENSMUSG00000058325, Dock1, dedicator of cytokinesis 1, [Score=55.8, Expect=5e-07]} {RNA1509_19446} {RNA1310_1320} {RNA815_27032}

Mlig455_047453 {REF} {Length: 5912} {Pfam: C2 domain in Dock180 and Zizimin proteins [PF14429.8, score=33.1]} {Human: ENSG00000150760, DOCK1, dedicator of cytokinesis 1, [Score=56.2, Expect=5e-07]} {Mouse: ENSMUSG00000058325, Dock1, dedicator of cytokinesis 1, [Score=55.8, Expect=5e-07]} {RNA1509_19446} {RNA1310_1320} {RNA815_27032}
35. MligTC455_40495 1466 30.54 Mlig455_045263

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.551

 NOVA1 0.952 - - - 0.952 - - Mlig455_045263 {REF} {Length: 3475} {Pfam: KH domain [PF00013.31, score=143.8]; KH domain [PF07650.19, score=43.1]; KH domain [PF13083.8, score=35.3]; NusA-like KH domain [PF13184.8, score=21.0]} {Human: ENSG00000139910, NOVA1, NOVA alternative splicing regulator 1, [RH, Score=227, Expect=2e-68]; ENSG00000104967, NOVA2, NOVA alternative splicing regulator 2, [RH, Score=219, Expect=3e-65]} {Mouse: ENSMUSG00000030411, Nova2, neuro-oncological ventral antigen 2, [RH, Score=219, Expect=2e-65]; ENSMUSG00000021047, Nova1, neuro-oncological ventral antigen 1, [RH, Score=215, Expect=1e-63]} {Dmel: FBgn0261552, ps, pasilla, [RH, Score=265, Expect=4e-82]} {Celegans: WBGene00013347, nova-1, NOVA kh (KH) homology domain homolog, [Score=137, Expect=8e-36]} {Smed: dd_Smed_v6_5632_0_1, dd_Smed_v6_5632_0_1, [Score=286, Expect=1e-89]} {RNA1509_3460} {RNA1310_9292} {RNA815_4794}
36. MligTC455_46373 2937 61.2 Mlig455_026015

Neo: -

Age: logFC(26M/2M)=-0.228

 C7orf57 0.952 - - - 0.952 - - Mlig455_026015 {REF} {Length: 1844} {Pfam: Family of unknown function (DUF5524) [PF17662.3, score=74.1]} {Human: ENSG00000164746, C7orf57, chromosome 7 open reading frame 57, [RH, Score=69.7, Expect=8e-13]} {Mouse: ENSMUSG00000040978, Gm11992, predicted gene 11992, [RH, Score=70.5, Expect=2e-13]} {Smed: dd_Smed_v6_7900_0_1, dd_Smed_v6_7900_0_1, [RH, Score=95.9, Expect=2e-23]} {RNA1509_1352} {RNA1310_19460.1, RNA1509_1352} {RNA1509_1352, RNA815_7343}
37. MligTC455_31388 302 6.3 Mlig455_042897

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=1.156

Region-enriched R4: 2.173/0.03395

 DZIP3 0.95 - - - 0.950 - - Mlig455_042897 {REF} {Length: 4534} {Pfam: DZIP3/ hRUL138-like HEPN [PF18738.3, score=66.1]; NACHT domain [PF05729.14, score=54.1]; Caspase recruitment domain [PF00619.23, score=35.9]} {Human: ENSG00000198919, DZIP3, DAZ interacting zinc finger protein 3, [RH, Score=60.1, Expect=2e-08]} {Mouse: ENSMUSG00000116073, LT629150.1, NLR family, pyrin domain containing 1B, [RH, Score=52.4, Expect=5e-06]} {Smed: dd_Smed_v6_11157_0_1, dd_Smed_v6_11157_0_1, [RH, Score=788, Expect=0.0]} {RNA1509_1974} {RNA1310_1220} {RNA815_423}
38. MligTC455_44631 1065 22.2 Mlig455_031535

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.307

 SNRNP70 0.95 - 0.950 - - - - Mlig455_031535 {REF} {Length: 1596} {TRANSSPLICED} {Pfam: U1 small nuclear ribonucleoprotein of 70kDa MW N terminal [PF12220.10, score=92.9]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=67.0]} {Human: ENSG00000104852, SNRNP70, small nuclear ribonucleoprotein U1 subunit 70, [RH, Score=238, Expect=1e-75]} {Mouse: ENSMUSG00000063511, Snrnp70, small nuclear ribonucleoprotein 70 (U1), [RH, Score=238, Expect=1e-75]} {Dmel: FBgn0016978, snRNP-U1-70K, small ribonucleoprotein particle U1 subunit 70K, [RH, Score=247, Expect=4e-79]} {Celegans: WBGene00004390, rnp-7, RNP (RRM RNA binding domain) containing, [RH, Score=242, Expect=9e-79]} {Smed: dd_Smed_v6_633_0_1, dd_Smed_v6_633_0_1, [RH, Score=315, Expect=2e-107]} {RNA1509_11652, RNA1509_27470} {RNA1310_6001.2, RNA1509_11652, RNA1509_27470} {RNA1509_11652, RNA1509_27470, RNA815_2161.1}
39. MligTC455_46104 657 13.69 Mlig455_009990

Neo: Irradiation

Age: -

Region-enriched R5: 1.541/0.00012

 0.95 - 0.950 - - - - Mlig455_009990 {REF} {Length: 2393} {Pfam: GLE1-like protein [PF07817.15, score=39.6]} {Dmel: FBgn0033316, CG14749, [Score=49.3, Expect=1e-05]} {RNA1509_29186} {RNA1310_22571.1} {RNA815_23708.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA