TomoSeq data search

Data search

Results for MligTC455_44704

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44704

104

2.17

Mlig455_050401

Neo: -

Age: -

Region-enriched R4: 2.979/0.04664

MLF2

Mlig455_050401 {REF} {Length: 1827} {Pfam: Myelodysplasia-myeloid leukemia factor 1-interacting protein [PF10248.11, score=119.0]} {Human: ENSG00000089693, MLF2, myeloid leukemia factor 2, [Score=87.8, Expect=8e-20]} {Mouse: ENSMUSG00000048416, Mlf1, myeloid leukemia factor 1, [Score=92.0, Expect=3e-21]; ENSMUSG00000030120, Mlf2, myeloid leukemia factor 2, [Score=88.6, Expect=3e-20]} {Dmel: FBgn0034051, Mlf, Myelodysplasia/myeloid leukemia factor, [Score=89.7, Expect=1e-20]} {Smed: dd_Smed_v6_4787_0_1, dd_Smed_v6_4787_0_1, [Score=100, Expect=4e-25]} {RNA1509_25069, RNA1509_57570} {RNA1310_19505, RNA1509_25069, RNA1509_57570} {RNA1509_25069, RNA1509_57570, RNA815_19430}

Cumulative graph for MligTC455_44704

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-7.62	1.796	0.02565	0.42340
RegionR2	-0.08	1.796	0.93235	1.00000
RegionR3	-0.03	1.796	0.92670	1.00000
RegionR4	2.979	1.796	0.00695	0.04664
RegionR5	0.941	1.796	0.45819	0.82044
RegionR6	1.574	1.796	0.17544	0.73603
RegionR7	1.001	1.796	0.43938	1.00000
RegionR8	1.234	1.796	0.53293	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.172	1.796	1.00000	1.00000
RegenerationR2	-2.057	1.796	0.00752	0.13796
RegenerationR3	-1.247	1.796	0.31663	0.74569
RegenerationR4	-1.324	1.796	0.16452	0.59889
RegenerationR5	-0.091	1.796	0.96259	1.00000
RegenerationR6	-1.253	1.796	0.16544	0.49574
RegenerationBL	-1.598	1.796	0.22460	0.57380
RegenerationTP	-2.161	1.796	0.15708	0.58502

Genes with expression patterns similar to MligTC455_44704

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44704	104	2.17	Mlig455_050401	Neo: - Age: - Region-enriched R4: 2.979/0.04664	MLF2	4	-	-	1.000	1.000	1.000	1.000	Mlig455_050401 {REF} {Length: 1827} {Pfam: Myelodysplasia-myeloid leukemia factor 1-interacting protein [PF10248.11, score=119.0]} {Human: ENSG00000089693, MLF2, myeloid leukemia factor 2, [Score=87.8, Expect=8e-20]} {Mouse: ENSMUSG00000048416, Mlf1, myeloid leukemia factor 1, [Score=92.0, Expect=3e-21]; ENSMUSG00000030120, Mlf2, myeloid leukemia factor 2, [Score=88.6, Expect=3e-20]} {Dmel: FBgn0034051, Mlf, Myelodysplasia/myeloid leukemia factor, [Score=89.7, Expect=1e-20]} {Smed: dd_Smed_v6_4787_0_1, dd_Smed_v6_4787_0_1, [Score=100, Expect=4e-25]} {RNA1509_25069, RNA1509_57570} {RNA1310_19505, RNA1509_25069, RNA1509_57570} {RNA1509_25069, RNA1509_57570, RNA815_19430}
2.	MligTC455_40520	207	4.32	Mlig455_053211	Neo: - Age: Down-Up-Down, logFC(26M/2M)=2.096		0.977	-	-	-	0.977	-	-	Mlig455_053211 {REF} {Length: 1561} {RNA1509_11880} {RNA1310_18623, RNA1509_11880} {RNA1509_11880, RNA815_8546}
3.	MligTC455_15477	38	0.78	Mlig455_032839	Neo: Int S/G2/M Age: - Region-enriched R4: 4.944/0.03018		0.972	-	-	-	-	-	0.972	Mlig455_032839 {REF} {Length: 3814} {NoTransDecoderORF} {RNA1310_94743} {RNA815_50988}
4.	MligTC455_40871	48	1	Mlig455_050411	Neo: - Age: -		0.969	-	-	-	-	-	0.969	Mlig455_050411 {REF} {Length: 2867} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=173.2]} {Smed: dd_Smed_v6_16274_0_1, dd_Smed_v6_16274_0_1, [Score=227, Expect=3e-66]} {RNA1310_46466} {RNA815_48916}
5.	MligTC455_49826	25	0.52	Mlig455_019655, Mlig455_048057	Neo: - Age: -		0.966	-	-	-	-	-	0.966	Mlig455_019655 {REF} {Length: 723} {NoTransDecoderORF} {RNA1310_134460} Mlig455_048057 {REF} {Length: 437} {NoTransDecoderORF} {RNA1310_134460}
6.	MligTC455_30396	100	2.08	Mlig455_029584	Neo: - Age: -	TRAF6	0.965	-	-	-	-	-	0.965	Mlig455_029584 {REF} {Length: 1467} {Pfam: TRAF-type zinc finger [PF02176.20, score=38.0]} {Human: ENSG00000175104, TRAF6, TNF receptor associated factor 6, [Score=88.2, Expect=2e-18]; ENSG00000131323, TRAF3, TNF receptor associated factor 3, [Score=85.1, Expect=2e-17]} {Mouse: ENSMUSG00000026942, Traf2, TNF receptor-associated factor 2, [Score=89.7, Expect=4e-19]; ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=89.0, Expect=8e-19]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [Score=87.0, Expect=1e-18]} {RNA1509_36404} {RNA1310_37521} {RNA815_9291}
7.	MligTC455_52397	59	1.24	Mlig455_025356, Mlig455_025401	Neo: - Age: Up-Down-Down Region-enriched R2: 4.881/0.02398 Region-enriched R4: 3.564/0.00150	PRRX1	0.965	-	-	-	-	-	0.965	Mlig455_025356 {REF} {Length: 2164} {Pfam: Homeodomain [PF00046.31, score=78.6]} {Human: ENSG00000116132, PRRX1, paired related homeobox 1, [RH, Score=101, Expect=2e-24]; ENSG00000167157, PRRX2, paired related homeobox 2, [RH, Score=97.8, Expect=5e-23]} {Mouse: ENSMUSG00000026586, Prrx1, paired related homeobox 1, [RH, Score=101, Expect=1e-24]; ENSMUSG00000039476, Prrx2, paired related homeobox 2, [RH, Score=98.2, Expect=2e-23]} {Dmel: FBgn0034821, CG9876, [RH, Score=106, Expect=3e-26]} {Celegans: WBGene00044330, alr-1, AristaLess (Drosophila homeodomain) Related, [Score=100, Expect=9e-24]} {Smed: dd_Smed_v6_29211_0_1, dd_Smed_v6_29211_0_1, [Score=100, Expect=2e-23]} {RNA1509_43894} {RNA1310_15380} {RNA815_19462} Mlig455_025401 {REF} {Length: 1392} {Pfam: Homeodomain [PF00046.31, score=78.6]} {Human: ENSG00000116132, PRRX1, paired related homeobox 1, [RH, Score=101, Expect=2e-24]; ENSG00000167157, PRRX2, paired related homeobox 2, [RH, Score=97.8, Expect=4e-23]} {Mouse: ENSMUSG00000026586, Prrx1, paired related homeobox 1, [RH, Score=101, Expect=1e-24]; ENSMUSG00000039476, Prrx2, paired related homeobox 2, [RH, Score=98.2, Expect=2e-23]} {Dmel: FBgn0034821, CG9876, [RH, Score=105, Expect=3e-26]} {Celegans: WBGene00044330, alr-1, AristaLess (Drosophila homeodomain) Related, [Score=101, Expect=4e-24]} {Smed: dd_Smed_v6_29211_0_1, dd_Smed_v6_29211_0_1, [Score=99.8, Expect=1e-23]} {RNA1509_43894} {RNA1310_15380} {RNA815_19462}
8.	MligTC455_28828	75	1.56	Mlig455_025597, Mlig455_032280, Mlig455_052189, Mlig455_052896	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_025597 {REF} {Length: 976} {NoTransDecoderORF} {RNA1509_34915} {RNA1310_8956.2} {RNA815_41033.2} Mlig455_032280 {REF} {Length: 346} {NoTransDecoderORF} {RNA1509_51837} {RNA1310_8956.1} {RNA815_41033.1} Mlig455_052189 {REF} {Length: 984} {NoTransDecoderORF} {RNA1509_51837} {RNA1310_8956.2} {RNA815_41033.2} Mlig455_052896 {REF} {Length: 978} {NoTransDecoderORF} {RNA1509_34915} {RNA1310_8956.2} {RNA815_41033.2}
9.	MligTC455_35851	84	1.74	Mlig455_060481	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_060481 {REF} {Length: 2116} {RNA1509_15445} {RNA1310_19911} {RNA815_6089}
10.	MligTC455_28882	138	2.87	Mlig455_014612	Neo: - Age: Up-Down-Up		0.957	-	-	-	-	-	0.957	Mlig455_014612 {REF} {Length: 4294} {RNA1509_49147} {RNA1310_36918} {RNA815_2940.1}
11.	MligTC455_31206	420	8.76	Mlig455_049790	Neo: - Age: logFC(26M/2M)=-0.269		0.956	-	-	-	-	0.956	-	Mlig455_049790 {REF} {Length: 4626} {RNA1509_8114} {RNA1310_6709.1} {RNA815_13320.1}
12.	MligTC455_34581	38	0.78	Mlig455_055935	Neo: - Age: -	ZDHHC21	0.954	-	-	-	-	-	0.954	Mlig455_055935 {REF} {Length: 3399} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=108.6]} {Human: ENSG00000175893, ZDHHC21, zinc finger DHHC-type containing 21, [RH, Score=107, Expect=8e-27]} {Mouse: ENSMUSG00000028403, Zdhhc21, zinc finger, DHHC domain containing 21, [RH, Score=105, Expect=2e-26]} {Dmel: FBgn0034057, CG8314, [Score=89.7, Expect=1e-20]} {Celegans: WBGene00010892, dhhc-6, Palmitoyltransferase, [Score=76.3, Expect=2e-15]} {Smed: dd_Smed_v6_6973_0_1, dd_Smed_v6_6973_0_1, [RH, Score=172, Expect=7e-52]} {RNA1509_18665} {RNA1310_23572} {RNA815_12326}
13.	MligTC455_35321	39	0.81	Mlig455_022485	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_022485 {REF} {Length: 728} {NoTransDecoderORF} {RNA1310_43348} {RNA815_50885}

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