Data search
Results for MligTC455_44865
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_44865 | 1105 | 23.03 | Mlig455_051846 | Neo: Int S/G2/M Age: - |
Mlig455_051846 {REF} {Length: 1626} {TRANSSPLICED} {RNA1509_9491} {RNA1310_17085, RNA1509_9491} {RNA1509_9491, RNA815_7748} |
Cumulative graph for MligTC455_44865
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.703 | 4.8 | 0.41846 | 1.00000 | |
| RegionR2 | -0.076 | 4.8 | 0.83537 | 1.00000 | |
| RegionR3 | -0.524 | 4.8 | 0.10283 | 0.56120 | |
| RegionR4 | 0.16 | 4.8 | 0.61380 | 0.92466 | |
| RegionR5 | 0.45 | 4.8 | 0.08501 | 0.27290 | |
| RegionR6 | 0.261 | 4.8 | 0.38521 | 0.96257 | |
| RegionR7 | 0.144 | 4.8 | 0.72596 | 1.00000 | |
| RegionR8 | 0.287 | 4.8 | 0.58156 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.75 | 4.8 | 0.26664 | 0.97007 | |
| RegenerationR2 | -0.024 | 4.8 | 0.93786 | 1.00000 | |
| RegenerationR3 | 0.353 | 4.8 | 0.29524 | 0.72686 | |
| RegenerationR4 | 0.223 | 4.8 | 0.46891 | 0.85271 | |
| RegenerationR5 | -0.009 | 4.8 | 0.97372 | 1.00000 | |
| RegenerationR6 | 0.279 | 4.8 | 0.37219 | 0.71506 | |
| RegenerationBL | 0.492 | 4.8 | 0.17084 | 0.49571 | |
| RegenerationTP | 0.476 | 4.8 | 0.24745 | 0.69452 |
Genes with expression patterns similar to MligTC455_44865
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_44865 | 1105 | 23.03 | Mlig455_051846 | Neo: Int S/G2/M Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_051846 {REF} {Length: 1626} {TRANSSPLICED} {RNA1509_9491} {RNA1310_17085, RNA1509_9491} {RNA1509_9491, RNA815_7748} | |
| 2. | MligTC455_29625 | 8291 | 172.72 | Mlig455_041031 | Neo: - Age: Down-Up-Down |
DAZAP1 | 0.98 | - | - | - | - | 0.980 | - | Mlig455_041031 {REF} {Length: 1830} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=109.4]; RNA recognition motif [PF16367.7, score=50.3]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=24.2]} {Human: ENSG00000071626, DAZAP1, DAZ associated protein 1, [RH, Score=177, Expect=1e-51]} {Mouse: ENSMUSG00000069565, Dazap1, DAZ associated protein 1, [RH, Score=175, Expect=5e-51]} {Dmel: FBgn0004838, Hrb27C, Heterogeneous nuclear ribonucleoprotein at 27C, [RH, Score=169, Expect=1e-48]} {Celegans: WBGene00003423, msi-1, MuSashI (Fly neural) family; Neural RNA-binding protein MSI-1, [Score=148, Expect=6e-42]} {Smed: dd_Smed_v6_1047_0_1, dd_Smed_v6_1047_0_1, [RH, Score=240, Expect=4e-77]} {RNA1509_596, RNA1509_7407} {RNA1310_18564, RNA1509_7407} {RNA1509_7407, RNA815_7168.1} |
| 3. | MligTC455_29626 | 8303 | 172.97 | Mlig455_041134 | Neo: Irradiation |
DAZAP1 | 0.972 | - | - | - | - | 0.972 | - | Mlig455_041134 {REF} {Length: 1839} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=109.2]; RNA recognition motif [PF16367.7, score=50.8]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=24.5]} {Human: ENSG00000071626, DAZAP1, DAZ associated protein 1, [RH, Score=177, Expect=8e-52]} {Mouse: ENSMUSG00000069565, Dazap1, DAZ associated protein 1, [RH, Score=175, Expect=5e-51]} {Dmel: FBgn0004838, Hrb27C, Heterogeneous nuclear ribonucleoprotein at 27C, [RH, Score=168, Expect=2e-48]} {Celegans: WBGene00003423, msi-1, MuSashI (Fly neural) family; Neural RNA-binding protein MSI-1, [Score=149, Expect=5e-42]} {Smed: dd_Smed_v6_1047_0_1, dd_Smed_v6_1047_0_1, [RH, Score=240, Expect=3e-77]} {RNA1509_3807, RNA1509_596} {RNA1310_18564, RNA1509_3807, RNA1509_596} {RNA1509_3807, RNA1509_596, RNA815_7168.1} |
| 4. | MligTC455_25467 | 838 | 17.46 | Mlig455_019965, Mlig455_059888 | Neo: Irradiation Age: - Region-enriched R4: 1.383/0.01960 |
KREMEN1, PNKP | 0.969 | - | - | - | 0.969 | - | - | Mlig455_019965 {REF} {Length: 1025} {Pfam: WSC domain [PF01822.21, score=52.5]; PAN domain [PF00024.28, score=27.6]; MANEC domain [PF07502.16, score=20.3]; PAN domain [PF14295.8, score=18.7]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=53.9, Expect=5e-08]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=56.2, Expect=5e-09]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=46.2, Expect=9e-06]} {RNA1509_46267} {RNA1310_43993} {RNA815_32275.1} Mlig455_059888 {REF} {Length: 2208} {TRANSSPLICED} {Pfam: Polynucleotide kinase 3 phosphatase [PF08645.13, score=157.7]; AAA domain [PF13671.8, score=39.5]; Chromatin associated protein KTI12 [PF08433.12, score=24.9]; AAA ATPase domain [PF13191.8, score=22.5]} {Human: ENSG00000039650, PNKP, polynucleotide kinase 3'-phosphatase, [RH, Score=296, Expect=9e-94]} {Mouse: ENSMUSG00000002963, Pnkp, polynucleotide kinase 3'- phosphatase, [RH, Score=281, Expect=3e-88]} {Dmel: FBgn0037578, CG9601, [RH, Score=290, Expect=2e-91]} {Celegans: WBGene00009010, F21D5.5, [RH, Score=300, Expect=5e-97]} {Smed: dd_Smed_v6_1211_0_1, dd_Smed_v6_1211_0_1, [RH, Score=274, Expect=2e-86]} {RNA1509_26104, RNA1509_4014} {RNA1310_9464, RNA1509_26104, RNA1509_4014} {RNA1509_26104, RNA1509_4014, RNA815_3236} |
| 5. | MligTC455_25468 | 835 | 17.4 | Mlig455_059894 | Neo: Int S/G2/M Age: Up-Down-Up Region-enriched R4: 1.400/0.01794 |
PNKP | 0.966 | - | - | - | 0.966 | - | - | Mlig455_059894 {REF} {Length: 3283} {Pfam: AAA domain [PF13671.8, score=41.5]; Chromatin associated protein KTI12 [PF08433.12, score=30.2]; Polynucleotide kinase 3 phosphatase [PF08645.13, score=24.0]; AAA ATPase domain [PF13191.8, score=23.8]} {Human: ENSG00000039650, PNKP, polynucleotide kinase 3'-phosphatase, [Score=144, Expect=2e-39]} {Mouse: ENSMUSG00000002963, Pnkp, polynucleotide kinase 3'- phosphatase, [Score=140, Expect=5e-38]} {Dmel: FBgn0037578, CG9601, [Score=132, Expect=7e-35]} {Celegans: WBGene00009010, F21D5.5, [Score=164, Expect=9e-48]} {Smed: dd_Smed_v6_1211_0_2, dd_Smed_v6_1211_0_2, [Score=146, Expect=9e-41]} {RNA1509_29141, RNA1509_38859} {RNA1310_5154.1, RNA1509_29141} {RNA1509_29141, RNA815_12031} |
| 6. | MligTC455_17785 | 777 | 16.18 | Mlig455_020208 | Neo: Irradiation Age: logFC(26M/2M)=0.232 |
UMPS | 0.954 | - | - | - | - | - | 0.954 | Mlig455_020208 {REF} {Length: 2224} {TRANSSPLICED} {Pfam: Orotidine 5'-phosphate decarboxylase / HUMPS family [PF00215.26, score=189.0]; Phosphoribosyl transferase domain [PF00156.29, score=32.2]} {Human: ENSG00000114491, UMPS, uridine monophosphate synthetase, [RH, Score=441, Expect=2e-151]} {Mouse: ENSMUSG00000022814, Umps, uridine monophosphate synthetase, [RH, Score=436, Expect=1e-149]} {Dmel: FBgn0003257, r-l, rudimentary-like, [RH, Score=418, Expect=2e-142]} {Celegans: WBGene00011559, umps-1, Uridine 5'-monophosphate synthase Orotate phosphoribosyltransferase Orotidine 5'-phosphate decarboxylase, [RH, Score=273, Expect=4e-86]} {Smed: dd_Smed_v6_9082_0_1, dd_Smed_v6_9082_0_1, [RH, Score=380, Expect=6e-128]} {RNA1509_13918, RNA1509_19211, RNA1509_21837} {RNA1310_11630.1, RNA1509_13918, RNA1509_19211, RNA1509_21837} {RNA1509_13918, RNA1509_19211, RNA1509_21837, RNA815_4515.1} |
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