Data search
Results for MligTC455_45054
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45054 | 939 | 19.56 | Mlig455_011950 | Neo: - Age: Down-Up-Down |
UBL3 | Mlig455_011950 {REF} {Length: 1816} {TRANSSPLICED} {Pfam: Ubiquitin-2 like Rad60 SUMO-like [PF13881.8, score=84.4]} {Human: ENSG00000122042, UBL3, ubiquitin like 3, [Score=127, Expect=1e-38]} {Mouse: ENSMUSG00000001687, Ubl3, ubiquitin-like 3, [Score=127, Expect=9e-39]} {Dmel: FBgn0026076, UBL3, Ubiquitin like 3, [Score=123, Expect=9e-35]} {Celegans: WBGene00008121, C46F11.6, Ubiquitin-like protein, [Score=108, Expect=9e-32]} {Smed: dd_Smed_v6_10574_0_1, dd_Smed_v6_10574_0_1, [Score=95.9, Expect=8e-27]} {RNA1509_23086, RNA1509_40501, RNA1509_50763} {RNA1310_50105.2, RNA1509_23086, RNA1509_40501, RNA1509_50763} {RNA1509_23086, RNA1509_40501, RNA1509_50763, RNA815_23727} |
Cumulative graph for MligTC455_45054
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.864 | 4.462 | 0.20571 | 0.84439 | |
| RegionR2 | -0.737 | 4.462 | 0.05858 | 0.29145 | |
| RegionR3 | -0.487 | 4.462 | 0.13497 | 0.62909 | |
| RegionR4 | 0.901 | 4.462 | 0.01026 | 0.06228 | |
| RegionR5 | 0.597 | 4.462 | 0.03416 | 0.14229 | |
| RegionR6 | -0.03 | 4.462 | 0.92743 | 1.00000 | |
| RegionR7 | -0.205 | 4.462 | 0.60940 | 1.00000 | |
| RegionR8 | -0.902 | 4.462 | 0.08230 | 0.54460 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.76 | 4.462 | 0.09968 | 0.81527 | |
| RegenerationR2 | -0.21 | 4.462 | 0.58211 | 0.90802 | |
| RegenerationR3 | -0.109 | 4.462 | 0.78131 | 0.97607 | |
| RegenerationR4 | -0.847 | 4.462 | 0.02731 | 0.26534 | |
| RegenerationR5 | -0.606 | 4.462 | 0.08976 | 0.46095 | |
| RegenerationR6 | 0.036 | 4.462 | 0.92550 | 1.00000 | |
| RegenerationBL | 0.246 | 4.462 | 0.58504 | 0.93630 | |
| RegenerationTP | -0.125 | 4.462 | 0.80859 | 1.00000 |
Genes with expression patterns similar to MligTC455_45054
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45054 | 939 | 19.56 | Mlig455_011950 | Neo: - Age: Down-Up-Down |
UBL3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_011950 {REF} {Length: 1816} {TRANSSPLICED} {Pfam: Ubiquitin-2 like Rad60 SUMO-like [PF13881.8, score=84.4]} {Human: ENSG00000122042, UBL3, ubiquitin like 3, [Score=127, Expect=1e-38]} {Mouse: ENSMUSG00000001687, Ubl3, ubiquitin-like 3, [Score=127, Expect=9e-39]} {Dmel: FBgn0026076, UBL3, Ubiquitin like 3, [Score=123, Expect=9e-35]} {Celegans: WBGene00008121, C46F11.6, Ubiquitin-like protein, [Score=108, Expect=9e-32]} {Smed: dd_Smed_v6_10574_0_1, dd_Smed_v6_10574_0_1, [Score=95.9, Expect=8e-27]} {RNA1509_23086, RNA1509_40501, RNA1509_50763} {RNA1310_50105.2, RNA1509_23086, RNA1509_40501, RNA1509_50763} {RNA1509_23086, RNA1509_40501, RNA1509_50763, RNA815_23727} |
| 2. | MligTC455_19077 | 965 | 20.1 | Mlig455_056290, Mlig455_056316 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.308/0.04677 |
JADE1 | 1.772 | - | - | - | 0.951 | - | 0.821 | Mlig455_056290 {REF} {Length: 4617} {Pfam: PHD-zinc-finger like domain [PF13832.8, score=100.9]; PHD-like zinc-binding domain [PF13771.8, score=86.2]; PHD-finger [PF13831.8, score=43.3]; PHD-finger [PF00628.31, score=40.9]; Prokaryotic RING finger family 1 [PF14446.8, score=22.0]} {Human: ENSG00000077684, JADE1, jade family PHD finger 1, [RH, Score=278, Expect=2e-79]; ENSG00000102221, JADE3, jade family PHD finger 3, [RH, Score=277, Expect=7e-79]; ENSG00000043143, JADE2, jade family PHD finger 2, [RH, Score=274, Expect=7e-78]} {Mouse: ENSMUSG00000025764, Jade1, jade family PHD finger 1, [RH, Score=278, Expect=2e-79]; ENSMUSG00000037315, Jade3, jade family PHD finger 3, [RH, Score=274, Expect=4e-78]; ENSMUSG00000020387, Jade2, jade family PHD finger 2, [RH, Score=273, Expect=1e-77]} {Dmel: FBgn0035106, rno, rhinoceros, [RH, Score=296, Expect=8e-83]} {Celegans: WBGene00006975, zfp-1, isoform a, [Score=140, Expect=1e-33]} {Smed: dd_Smed_v6_11492_0_2, dd_Smed_v6_11492_0_2, [RH, Score=249, Expect=3e-70]} {RNA1509_23754, RNA1509_29182, RNA1509_56024} {RNA1310_2765.2, RNA1509_23754, RNA1509_29182, RNA1509_56024} {RNA1509_23754, RNA1509_29182, RNA1509_56024, RNA815_2863} Mlig455_056316 {REF} {Length: 4168} {TRANSSPLICED} {Pfam: PHD-zinc-finger like domain [PF13832.8, score=100.9]; PHD-like zinc-binding domain [PF13771.8, score=86.2]; PHD-finger [PF13831.8, score=43.3]; PHD-finger [PF00628.31, score=40.9]; Prokaryotic RING finger family 1 [PF14446.8, score=22.0]} {Human: ENSG00000077684, JADE1, jade family PHD finger 1, [RH, Score=280, Expect=8e-80]; ENSG00000102221, JADE3, jade family PHD finger 3, [RH, Score=277, Expect=5e-79]; ENSG00000043143, JADE2, jade family PHD finger 2, [RH, Score=274, Expect=7e-78]} {Mouse: ENSMUSG00000025764, Jade1, jade family PHD finger 1, [RH, Score=280, Expect=5e-80]; ENSMUSG00000037315, Jade3, jade family PHD finger 3, [RH, Score=276, Expect=1e-78]; ENSMUSG00000020387, Jade2, jade family PHD finger 2, [RH, Score=273, Expect=9e-78]} {Dmel: FBgn0035106, rno, rhinoceros, [RH, Score=296, Expect=1e-82]} {Celegans: WBGene00006975, zfp-1, isoform a, [Score=140, Expect=1e-33]} {Smed: dd_Smed_v6_11492_0_2, dd_Smed_v6_11492_0_2, [RH, Score=251, Expect=4e-71]} {RNA1509_56024} {RNA1310_2808} {RNA815_2863} |
| 3. | MligTC455_35832 | 411 | 8.55 | Mlig455_015670, Mlig455_044159 | Neo: - Age: - |
1.749 | - | - | 0.959 | 0.790 | - | - | Mlig455_015670 {REF} {Length: 1700} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=88.2, Expect=1e-20]} {RNA1310_19254} {RNA815_11059} Mlig455_044159 {REF} {Length: 1897} {Pfam: Glycosyltransferase 61 [PF04577.16, score=30.9]} {Smed: dd_Smed_v6_13513_0_1, dd_Smed_v6_13513_0_1, [Score=53.5, Expect=3e-09]} {RNA1509_51315} {RNA1310_13707.1} {RNA815_4258} |
|
| 4. | MligTC455_48545 | 413 | 8.6 | Mlig455_007143 | Neo: - Age: Up-Down-Down |
EDEM3 | 1.722 | - | - | - | - | 0.768 | 0.954 | Mlig455_007143 {REF} {Length: 5756} {TRANSSPLICED} {Pfam: Glycosyl hydrolase family 47 [PF01532.22, score=392.3]; PA domain [PF02225.24, score=29.8]} {Human: ENSG00000116406, EDEM3, ER degradation enhancing alpha-mannosidase like protein 3, [RH, Score=677, Expect=0.0]} {Mouse: ENSMUSG00000043019, Edem3, ER degradation enhancer, mannosidase alpha-like 3, [RH, Score=681, Expect=0.0]} {Dmel: FBgn0032480, Edem2, ER degradation enhancer, mannosidase alpha-like 2, [RH, Score=711, Expect=0.0]} {Celegans: WBGene00013919, ZC506.1, alpha-1,2-Mannosidase, [RH, Score=649, Expect=0.0]} {Smed: dd_Smed_v6_13088_0_1, dd_Smed_v6_13088_0_1, [RH, Score=396, Expect=3e-130]} {RNA1509_12238} {RNA1310_4248} {RNA815_2991} |
| 5. | MligTC455_50858 | 587 | 12.23 | Mlig455_007072 | Neo: - Age: logFC(26M/2M)=-0.726 |
EIF5 | 1.702 | - | - | 0.960 | - | - | 0.742 | Mlig455_007072 {REF} {Length: 2213} {TRANSSPLICED} {Pfam: Domain found in IF2B/IF5 [PF01873.19, score=128.6]; eIF4-gamma/eIF5/eIF2-epsilon [PF02020.20, score=61.2]} {Human: ENSG00000100664, EIF5, eukaryotic translation initiation factor 5, [Score=286, Expect=2e-91]} {Mouse: ENSMUSG00000021282, Eif5, eukaryotic translation initiation factor 5, [RH, Score=211, Expect=2e-63]} {Dmel: FBgn0030719, eIF5, eukaryotic translation initiation factor 5, [Score=288, Expect=4e-92]} {Celegans: WBGene00016496, C37C3.2, Eukaryotic translation initiation factor 5, [RH, Score=276, Expect=3e-88]} {Smed: dd_Smed_v6_2267_0_1, dd_Smed_v6_2267_0_1, [RH, Score=194, Expect=8e-58]} {RNA1509_2860} {RNA1310_1097.1} {RNA815_11901.1} |
| 6. | MligTC455_16987 | 371 | 7.72 | Mlig455_007997 | Neo: - Age: Down-Down-Up |
IDI1 | 1.691 | - | 0.736 | - | - | - | 0.955 | Mlig455_007997 {REF} {Length: 1656} {TRANSSPLICED} {Pfam: NUDIX domain [PF00293.30, score=51.0]} {Human: ENSG00000067064, IDI1, isopentenyl-diphosphate delta isomerase 1, [RH, Score=155, Expect=1e-46]} {Mouse: ENSMUSG00000058258, Idi1, isopentenyl-diphosphate delta isomerase, [RH, Score=160, Expect=8e-48]} {Dmel: FBgn0038876, CG5919, [RH, Score=152, Expect=2e-45]} {Celegans: WBGene00019460, idi-1, Isopentenyl Diphosphate Isomerase; Isopentenyl-diphosphate isomerase, [RH, Score=127, Expect=9e-36]} {Smed: dd_Smed_v6_3910_0_1, dd_Smed_v6_3910_0_1, [RH, Score=150, Expect=1e-44]} {RNA1509_24112} {RNA1310_18905, RNA1509_24112} {RNA1509_24112, RNA815_31536} |
| 7. | MligTC455_20414 | 341 | 7.11 | Mlig455_001857 | Neo: - Age: - |
U2AF2 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_001857 {REF} {Length: 4922} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=110.2]; Occluded RNA-recognition motif [PF16842.7, score=24.1]; RNA recognition motif [PF16367.7, score=20.0]} {Human: ENSG00000063244, U2AF2, U2 small nuclear RNA auxiliary factor 2, [RH, Score=512, Expect=5e-179]} {Mouse: ENSMUSG00000030435, U2af2, U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2, [RH, Score=512, Expect=3e-179]} {Dmel: FBgn0005411, U2af50, U2 small nuclear riboprotein auxiliary factor 50, [RH, Score=560, Expect=0.0]} {Celegans: WBGene00006697, uaf-1, Splicing factor U2AF 65 kDa subunit, [RH, Score=449, Expect=2e-154]} {Smed: dd_Smed_v6_3590_0_1, dd_Smed_v6_3590_0_1, [RH, Score=558, Expect=0.0]} {RNA1509_25540, RNA1509_35646, RNA1509_3800, RNA1509_39764, RNA1509_45067} {RNA1310_13147.1, RNA1509_25540, RNA1509_35646, RNA1509_3800, RNA1509_39764, RNA1509_45067} {RNA1509_25540, RNA1509_35646, RNA1509_3800, RNA1509_39764, RNA1509_45067, RNA815_6631} |
| 8. | MligTC455_29590 | 8591 | 178.98 | Mlig455_034789 | Neo: Int S/G2/M Age: Down-Down-Up |
RPL34 | 0.965 | - | - | - | - | - | 0.965 | Mlig455_034789 {REF} {Length: 504} {TRANSSPLICED} {Pfam: Ribosomal protein L34e [PF01199.20, score=134.7]} {Human: ENSG00000109475, RPL34, ribosomal protein L34, [RH, Score=124, Expect=8e-38]} {Mouse: ENSMUSG00000062006, Rpl34, ribosomal protein L34, [RH, Score=125, Expect=4e-38]} {Dmel: FBgn0039406, RpL34a, Ribosomal protein L34a, [RH, Score=152, Expect=2e-48]} {Celegans: WBGene00004448, rpl-34, Ribosomal Protein, Large subunit, [RH, Score=118, Expect=7e-36]} {Smed: dd_Smed_v6_110_0_1, dd_Smed_v6_110_0_1, [RH, Score=151, Expect=4e-49]} {RNA1509_418, RNA1509_846} {RNA1310_70667, RNA1509_846} {RNA1509_846, RNA815_30525} |
| 9. | MligTC455_10750 | 444 | 9.25 | Mlig455_006346, Mlig455_006396 | Neo: - Age: logFC(26M/2M)=1.295 Region-enriched R4: 2.273/0.00787 |
0.964 | - | - | 0.964 | - | - | - | Mlig455_006346 {REF} {Length: 762} {RNA1509_56607} {RNA1310_53537.1} {RNA815_22579} Mlig455_006396 {REF} {Length: 805} {RNA1509_56607} {RNA1310_53537.1} {RNA815_22579} |
|
| 10. | MligTC455_25901 | 333 | 6.93 | Mlig455_053328, Mlig455_054469 | Neo: - Age: Down-Down-Down |
0.961 | - | - | - | - | - | 0.961 | Mlig455_053328 {REF} {Length: 2935} {TRANSSPLICED} {RNA1509_3577} {RNA1310_173.2} {RNA815_485.1} Mlig455_054469 {REF} {Length: 4367} {TRANSSPLICED} {RNA1509_3577} {RNA1310_173.2} {RNA815_485.1} |
|
| 11. | MligTC455_25902 | 1500 | 31.24 | Mlig455_009504, Mlig455_009544, Mlig455_052770, Mlig455_054087, Mlig455_059396, Mlig455_061235, Mlig455_061748, Mlig455_064501 | Neo: - Age: logFC(26M/2M)=7.524 Regeneration-upregulated BL: 2.245 Regeneration-enriched BL: 2.245 |
0.961 | - | - | - | - | - | 0.961 | Mlig455_009504 {REF} {Length: 4614} {TRANSSPLICED} {RNA1509_3577} {RNA1310_173.2} {RNA815_485.1} Mlig455_009544 {REF} {Length: 4612} {TRANSSPLICED} {RNA1509_3577} {RNA1310_173.2} {RNA815_485.1} Mlig455_052770 {REF} {Length: 5275} {TRANSSPLICED} {RNA1509_3577} {RNA1310_173.2} {RNA815_485.1} Mlig455_054087 {REF} {Length: 4537} {TRANSSPLICED} {RNA1509_3577} {RNA1310_173.2} {RNA815_485.1} Mlig455_059396 {REF} {Length: 4612} {TRANSSPLICED} {RNA1509_3577} {RNA1310_173.2} {RNA815_485.1} Mlig455_061235 {REF} {Length: 4612} {TRANSSPLICED} {RNA1509_3577} {RNA1310_173.2} {RNA815_485.1} Mlig455_061748 {REF} {Length: 4612} {TRANSSPLICED} {RNA1509_3577} {RNA1310_173.2} {RNA815_485.1} Mlig455_064501 {REF} {Length: 5178} {TRANSSPLICED} {RNA1509_3577} {RNA1310_173.2} {RNA815_485.1} |
|
| 12. | MligTC455_22774 | 156 | 3.25 | Mlig455_045395 | Neo: - Age: - Region-enriched R5: 2.504/0.00000 |
0.959 | - | - | 0.959 | - | - | - | Mlig455_045395 {REF} {Length: 3099} {Mouse: ENSMUSG00000030878, Cdr2, cerebellar degeneration-related 2, [Score=48.9, Expect=5e-06]} {Dmel: FBgn0032876, Cen, Centrocortin, [Score=64.7, Expect=4e-11]} {Smed: dd_Smed_v6_3478_0_1, dd_Smed_v6_3478_0_1, [Score=61.2, Expect=2e-10]} {RNA1310_40607} {RNA815_42744} | |
| 13. | MligTC455_49549 | 235 | 4.89 | Mlig455_028614 | Neo: - Age: Down-Up-Down |
0.959 | - | - | - | - | - | 0.959 | Mlig455_028614 {REF} {Length: 1025} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_36556} {RNA1310_20988} {RNA815_9740} | |
| 14. | MligTC455_28063 | 833 | 17.35 | Mlig455_056559 | Neo: - Age: - |
TFB1M | 0.958 | - | - | 0.958 | - | - | - | Mlig455_056559 {REF} {Length: 1318} {TRANSSPLICED} {Pfam: Ribosomal RNA adenine dimethylase [PF00398.22, score=119.9]; Methyltransferase domain [PF13649.8, score=22.8]; Protein of unknown function (DUF1698) [PF08003.13, score=19.7]; Methyltransferase domain [PF13489.8, score=18.8]} {Human: ENSG00000029639, TFB1M, transcription factor B1, mitochondrial, [RH, Score=237, Expect=3e-75]} {Mouse: ENSMUSG00000036983, Tfb1m, transcription factor B1, mitochondrial, [RH, Score=230, Expect=1e-72]} {Dmel: FBgn0261381, mtTFB1, Mitochondrial Transcription Factor B1, [RH, Score=200, Expect=2e-61]} {Celegans: WBGene00020189, tfbm-1, Dimethyladenosine transferase 1, mitochondrial, [RH, Score=243, Expect=1e-77]} {Smed: dd_Smed_v6_8684_0_1, dd_Smed_v6_8684_0_1, [RH, Score=283, Expect=4e-93]} {RNA1509_31959, RNA1509_57587} {RNA1310_25999, RNA1509_57587} {RNA1509_57587, RNA815_11217} |
| 15. | MligTC455_44404 | 1497 | 31.19 | Mlig455_001573 | Neo: Irradiation Age: - Region-specific R4: 3.161 Region-enriched R4: 1.799/0.00000 Regeneration-downregulated R4: -2.215 Regeneration-depleted R4: -2.215 |
BRCA1 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_001573 {REF} {Length: 1099} {Pfam: BRCA1 C Terminus (BRCT) domain [PF00533.28, score=29.2]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=23.3]} {Human: ENSG00000012048, BRCA1, BRCA1, DNA repair associated, [RH, Score=119, Expect=2e-29]} {Mouse: ENSMUSG00000017146, Brca1, breast cancer 1, early onset, [RH, Score=112, Expect=7e-26]} {Celegans: WBGene00000264, brc-1, BRCa homolog (Tumor suppressor gene Brca1), [Score=60.8, Expect=1e-09]} {RNA1509_8035} {RNA1310_8504.2} {RNA815_14377} |
| 16. | MligTC455_25903 | 200 | 4.17 | Mlig455_069664 | Neo: - Age: - |
0.953 | - | - | - | - | - | 0.953 | Mlig455_069664 {REF} {Length: 6185} {TRANSSPLICED} {RNA1509_3577} {RNA1310_173.2, RNA1509_3577} {RNA1509_3577, RNA815_485.1} | |
| 17. | MligTC455_32303 | 411 | 8.56 | Mlig455_028774 | Neo: Int S/G2/M Age: - |
MOSPD2 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_028774 {REF} {Length: 2914} {Pfam: CRAL/TRIO domain [PF00650.22, score=96.6]; MSP (Major sperm protein) domain [PF00635.28, score=50.9]} {Human: ENSG00000130150, MOSPD2, motile sperm domain containing 2, [RH, Score=211, Expect=2e-61]} {Mouse: ENSMUSG00000061778, Mospd2, motile sperm domain containing 2, [RH, Score=207, Expect=9e-61]} {Dmel: FBgn0053523, CG33523, [Score=157, Expect=3e-42]} {Celegans: WBGene00015148, hpo-28, Major sperm protein, [RH, Score=107, Expect=2e-24]} {Smed: dd_Smed_v6_14557_0_2, dd_Smed_v6_14557_0_2, [RH, Score=59.3, Expect=6e-10]} {RNA1509_26604, RNA1509_57073} {RNA1310_12055, RNA1509_26604} {RNA1509_26604, RNA815_5868} |
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