Data search
Results for MligTC455_45458
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45458 | 2463 | 51.31 | Mlig455_037559 | Neo: - Age: - |
VWA5A | Mlig455_037559 {REF} {Length: 3202} {TRANSSPLICED} {Pfam: von Willebrand factor type A domain [PF13768.8, score=86.3]; Vault protein inter-alpha-trypsin domain [PF08487.12, score=57.8]; von Willebrand factor type A domain [PF13519.8, score=40.0]; von Willebrand factor type A domain [PF00092.30, score=38.4]; Vault protein inter-alpha-trypsin domain [PF13757.8, score=27.4]} {Human: ENSG00000110002, VWA5A, von Willebrand factor A domain containing 5A, [Score=169, Expect=5e-43]} {Mouse: ENSMUSG00000023186, Vwa5a, von Willebrand factor A domain containing 5A, [Score=186, Expect=2e-48]} {Smed: dd_Smed_v6_1027_0_2, dd_Smed_v6_1027_0_2, [Score=182, Expect=2e-48]} {RNA1509_17712, RNA1509_3761} {RNA1310_3935.1, RNA1509_17712, RNA1509_3761} {RNA1509_17712, RNA1509_3761, RNA815_2368.1} |
Cumulative graph for MligTC455_45458
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.784 | 5.859 | 0.28034 | 0.93160 | |
| RegionR2 | 0.077 | 5.859 | 0.81326 | 1.00000 | |
| RegionR3 | 0.158 | 5.859 | 0.55247 | 1.00000 | |
| RegionR4 | 0.141 | 5.859 | 0.65319 | 0.95481 | |
| RegionR5 | 0.149 | 5.859 | 0.55143 | 0.91261 | |
| RegionR6 | 0.044 | 5.859 | 0.87205 | 1.00000 | |
| RegionR7 | 0.087 | 5.859 | 0.79003 | 1.00000 | |
| RegionR8 | 0.128 | 5.859 | 0.75194 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.5 | 5.859 | 0.64862 | 1.00000 | |
| RegenerationR2 | 0.605 | 5.859 | 0.03462 | 0.30663 | |
| RegenerationR3 | 0.349 | 5.859 | 0.26013 | 0.69451 | |
| RegenerationR4 | 0.277 | 5.859 | 0.38751 | 0.80575 | |
| RegenerationR5 | 0.349 | 5.859 | 0.23756 | 0.67163 | |
| RegenerationR6 | 0.231 | 5.859 | 0.46064 | 0.77830 | |
| RegenerationBL | -0.174 | 5.859 | 0.60937 | 0.95505 | |
| RegenerationTP | 0.343 | 5.859 | 0.33499 | 0.77916 |
Genes with expression patterns similar to MligTC455_45458
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45458 | 2463 | 51.31 | Mlig455_037559 | Neo: - Age: - |
VWA5A | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_037559 {REF} {Length: 3202} {TRANSSPLICED} {Pfam: von Willebrand factor type A domain [PF13768.8, score=86.3]; Vault protein inter-alpha-trypsin domain [PF08487.12, score=57.8]; von Willebrand factor type A domain [PF13519.8, score=40.0]; von Willebrand factor type A domain [PF00092.30, score=38.4]; Vault protein inter-alpha-trypsin domain [PF13757.8, score=27.4]} {Human: ENSG00000110002, VWA5A, von Willebrand factor A domain containing 5A, [Score=169, Expect=5e-43]} {Mouse: ENSMUSG00000023186, Vwa5a, von Willebrand factor A domain containing 5A, [Score=186, Expect=2e-48]} {Smed: dd_Smed_v6_1027_0_2, dd_Smed_v6_1027_0_2, [Score=182, Expect=2e-48]} {RNA1509_17712, RNA1509_3761} {RNA1310_3935.1, RNA1509_17712, RNA1509_3761} {RNA1509_17712, RNA1509_3761, RNA815_2368.1} |
| 2. | MligTC455_45459 | 2475 | 51.56 | Mlig455_057321 | Neo: - Age: - |
VWA5A | 5.994 | 1.000 | 0.999 | 0.999 | 0.999 | 0.998 | 0.999 | Mlig455_057321 {REF} {Length: 1090} {Pfam: von Willebrand factor type A domain [PF13768.8, score=87.1]; Vault protein inter-alpha-trypsin domain [PF08487.12, score=57.7]; von Willebrand factor type A domain [PF00092.30, score=41.1]; von Willebrand factor type A domain [PF13519.8, score=40.3]; Vault protein inter-alpha-trypsin domain [PF13757.8, score=27.4]; VWA domain containing CoxE-like protein [PF05762.16, score=18.9]} {Human: ENSG00000110002, VWA5A, von Willebrand factor A domain containing 5A, [Score=175, Expect=1e-44]} {Mouse: ENSMUSG00000023186, Vwa5a, von Willebrand factor A domain containing 5A, [Score=186, Expect=2e-48]} {Smed: dd_Smed_v6_1027_0_1, dd_Smed_v6_1027_0_1, [Score=202, Expect=2e-54]} {RNA1509_22593, RNA1509_3761, RNA1509_44533} {RNA1310_3935.1, RNA1509_22593, RNA1509_44533} {RNA1509_22593, RNA1509_44533, RNA815_28561} |
| 3. | MligTC455_29776 | 242 | 5.05 | Mlig455_039026 | Neo: - Age: - |
1.733 | - | - | - | 0.951 | - | 0.782 | Mlig455_039026 {REF} {Length: 3171} {RNA1509_52854, RNA1509_6748} {RNA1310_18154, RNA1509_52854} {RNA1509_52854, RNA815_24422.1} | |
| 4. | MligTC455_24170 | 2908 | 60.58 | Mlig455_025932 | Neo: - Age: Down-Up-Down |
PDCD6 | 1.684 | - | - | 0.727 | - | 0.957 | - | Mlig455_025932 {REF} {Length: 1040} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=73.5]; EF-hand domain [PF13405.8, score=70.3]; EF hand [PF00036.34, score=67.4]; EF-hand domain pair [PF13833.8, score=55.2]; EF hand [PF13202.8, score=45.6]} {Human: ENSG00000249915, PDCD6, programmed cell death 6, [RH, Score=218, Expect=6e-72]} {Mouse: ENSMUSG00000021576, Pdcd6, programmed cell death 6, [RH, Score=216, Expect=3e-71]} {Dmel: FBgn0086378, Alg-2, Apoptosis-linked gene-2, [Score=225, Expect=3e-75]} {Celegans: WBGene00019770, M04F3.4, [Score=193, Expect=6e-63]} {Smed: dd_Smed_v6_3585_0_1, dd_Smed_v6_3585_0_1, [Score=228, Expect=1e-76]} {RNA1509_12719, RNA1509_19462} {RNA1310_34663.1, RNA1509_12719} {RNA1509_12719, RNA815_17202} |
| 5. | MligTC455_49281 | 362 | 7.54 | Mlig455_020515 | Neo: - Age: - |
VAC14 | 0.978 | - | - | - | 0.978 | - | - | Mlig455_020515 {REF} {Length: 2719} {TRANSSPLICED} {Pfam: Vacuolar protein 14 C-terminal Fig4p binding [PF11916.10, score=177.4]; Vacuolar 14 Fab1-binding region [PF12755.9, score=110.3]; HEAT repeat [PF02985.24, score=33.1]; Dopey, N-terminal [PF04118.16, score=18.2]} {Human: ENSG00000103043, VAC14, Vac14, PIKFYVE complex component, [RH, Score=407, Expect=5e-131]} {Mouse: ENSMUSG00000010936, Vac14, Vac14 homolog (S. cerevisiae), [RH, Score=277, Expect=6e-82]} {Dmel: FBgn0038058, CG5608, [RH, Score=374, Expect=2e-119]} {Celegans: WBGene00010565, vacl-14, VAC (Yeast VACuole morphology)-Like, [RH, Score=322, Expect=6e-100]} {Smed: dd_Smed_v6_4616_0_1, dd_Smed_v6_4616_0_1, [RH, Score=190, Expect=3e-51]} {RNA1509_14711} {RNA1310_7953} {RNA815_10330} |
| 6. | MligTC455_19250 | 57 | 1.18 | Mlig455_050978 | Neo: - Age: - |
RAC1 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_050978 {REF} {Length: 1505} {Pfam: Ras family [PF00071.24, score=152.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=64.4]; ADP-ribosylation factor family [PF00025.23, score=23.1]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=208, Expect=2e-68]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=203, Expect=2e-66]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=201, Expect=2e-65]; ENSG00000177105, RHOG, ras homolog family member G, [Score=199, Expect=7e-65]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=208, Expect=1e-68]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=203, Expect=1e-66]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=200, Expect=3e-65]; ENSMUSG00000073982, Rhog, ras homolog family member G, [Score=199, Expect=5e-65]} {Dmel: FBgn0010333, Rac1, [Score=205, Expect=2e-67]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=211, Expect=6e-70]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=199, Expect=2e-65]} {RNA1310_32838} |
Berezikov Lab - 2020-2021 © ERIBA