Data search
Results for MligTC455_45515
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45515 | 5651 | 117.72 | Mlig455_002150, Mlig455_002249 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.276 Regeneration-enriched BL: 1.266 |
SRSF4 | Mlig455_002150 {REF} {Length: 1581} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=100.2]; RNA binding motif [PF08777.13, score=34.1]} {Human: ENSG00000116350, SRSF4, serine and arginine rich splicing factor 4, [RH, Score=188, Expect=3e-57]} {Mouse: ENSMUSG00000028911, Srsf4, serine/arginine-rich splicing factor 4, [RH, Score=190, Expect=4e-57]} {Dmel: FBgn0004587, B52, [RH, Score=180, Expect=1e-54]} {Celegans: WBGene00004699, rsp-2, Probable splicing factor, arginine/serine-rich 2, [RH, Score=148, Expect=4e-43]} {Smed: dd_Smed_v6_3431_0_1, dd_Smed_v6_3431_0_1, [RH, Score=183, Expect=2e-56]} {RNA1509_22914} {RNA1310_2260.1} {RNA815_2822} Mlig455_002249 {REF} {Length: 1685} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=99.7]; RNA binding motif [PF08777.13, score=33.6]} {Human: ENSG00000116350, SRSF4, serine and arginine rich splicing factor 4, [RH, Score=191, Expect=1e-57]} {Mouse: ENSMUSG00000028911, Srsf4, serine/arginine-rich splicing factor 4, [RH, Score=194, Expect=8e-58]} {Dmel: FBgn0004587, B52, [RH, Score=181, Expect=1e-54]} {Celegans: WBGene00004699, rsp-2, Probable splicing factor, arginine/serine-rich 2, [RH, Score=131, Expect=3e-36]} {Smed: dd_Smed_v6_3431_0_1, dd_Smed_v6_3431_0_1, [RH, Score=185, Expect=2e-56]} {RNA1509_22914} {RNA1310_2260.1} {RNA815_2822} |
Cumulative graph for MligTC455_45515
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.166 | 6.914 | 0.71886 | 1.00000 | |
| RegionR2 | -0.577 | 6.914 | 0.03774 | 0.22515 | |
| RegionR3 | -0.089 | 6.914 | 0.69921 | 1.00000 | |
| RegionR4 | 0.546 | 6.914 | 0.03744 | 0.15870 | |
| RegionR5 | 0.664 | 6.914 | 0.00162 | 0.01487 | |
| RegionR6 | -0.067 | 6.914 | 0.77263 | 1.00000 | |
| RegionR7 | -0.011 | 6.914 | 0.96762 | 1.00000 | |
| RegionR8 | -0.632 | 6.914 | 0.06947 | 0.50554 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.359 | 6.914 | 0.51512 | 1.00000 | |
| RegenerationR2 | 0.059 | 6.914 | 0.83133 | 0.99833 | |
| RegenerationR3 | 0.439 | 6.914 | 0.12724 | 0.54898 | |
| RegenerationR4 | 0.288 | 6.914 | 0.31971 | 0.75794 | |
| RegenerationR5 | 0.6 | 6.914 | 0.02740 | 0.28053 | |
| RegenerationR6 | 1.095 | 6.914 | 0.00011 | 0.00933 | |
| RegenerationBL | 1.266 | 6.914 | 0.00000 | 0.00016 | |
| RegenerationTP | 0.25 | 6.914 | 0.42931 | 0.85212 |
Genes with expression patterns similar to MligTC455_45515
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45515 | 5651 | 117.72 | Mlig455_002150, Mlig455_002249 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.276 Regeneration-enriched BL: 1.266 |
SRSF4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_002150 {REF} {Length: 1581} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=100.2]; RNA binding motif [PF08777.13, score=34.1]} {Human: ENSG00000116350, SRSF4, serine and arginine rich splicing factor 4, [RH, Score=188, Expect=3e-57]} {Mouse: ENSMUSG00000028911, Srsf4, serine/arginine-rich splicing factor 4, [RH, Score=190, Expect=4e-57]} {Dmel: FBgn0004587, B52, [RH, Score=180, Expect=1e-54]} {Celegans: WBGene00004699, rsp-2, Probable splicing factor, arginine/serine-rich 2, [RH, Score=148, Expect=4e-43]} {Smed: dd_Smed_v6_3431_0_1, dd_Smed_v6_3431_0_1, [RH, Score=183, Expect=2e-56]} {RNA1509_22914} {RNA1310_2260.1} {RNA815_2822} Mlig455_002249 {REF} {Length: 1685} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=99.7]; RNA binding motif [PF08777.13, score=33.6]} {Human: ENSG00000116350, SRSF4, serine and arginine rich splicing factor 4, [RH, Score=191, Expect=1e-57]} {Mouse: ENSMUSG00000028911, Srsf4, serine/arginine-rich splicing factor 4, [RH, Score=194, Expect=8e-58]} {Dmel: FBgn0004587, B52, [RH, Score=181, Expect=1e-54]} {Celegans: WBGene00004699, rsp-2, Probable splicing factor, arginine/serine-rich 2, [RH, Score=131, Expect=3e-36]} {Smed: dd_Smed_v6_3431_0_1, dd_Smed_v6_3431_0_1, [RH, Score=185, Expect=2e-56]} {RNA1509_22914} {RNA1310_2260.1} {RNA815_2822} |
| 2. | MligTC455_45516 | 2861 | 59.6 | Mlig455_002293 | Neo: Irradiation Age: logFC(26M/2M)=0.238 Regeneration-enriched BL: 1.277 |
SRSF4 | 5.975 | 0.997 | 0.990 | 0.999 | 0.994 | 0.998 | 0.997 | Mlig455_002293 {REF} {Length: 1828} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=99.1]; RNA binding motif [PF08777.13, score=33.1]} {Human: ENSG00000116350, SRSF4, serine and arginine rich splicing factor 4, [RH, Score=193, Expect=6e-57]} {Mouse: ENSMUSG00000028911, Srsf4, serine/arginine-rich splicing factor 4, [RH, Score=197, Expect=2e-58]} {Dmel: FBgn0004587, B52, [RH, Score=182, Expect=1e-54]} {Celegans: WBGene00004699, rsp-2, Probable splicing factor, arginine/serine-rich 2, [RH, Score=141, Expect=9e-40]} {Smed: dd_Smed_v6_3431_0_1, dd_Smed_v6_3431_0_1, [RH, Score=186, Expect=3e-56]} {RNA1509_22914} {RNA1310_8234, RNA1509_22914} {RNA1509_22914, RNA815_2822} |
| 3. | MligTC455_40047 | 1969 | 41.02 | Mlig455_061883 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.325/0.00004 Regeneration-upregulated BL: 1.463 Regeneration-enriched BL: 1.463 |
ARPP19 | 1.663 | - | - | - | - | 0.707 | 0.956 | Mlig455_061883 {REF} {Length: 1192} {TRANSSPLICED} {Pfam: cAMP-regulated phosphoprotein/endosulfine conserved region [PF04667.19, score=40.3]} {Human: ENSG00000128989, ARPP19, cAMP regulated phosphoprotein 19, [RH, Score=85.5, Expect=6e-22]; ENSG00000143420, ENSA, endosulfine alpha, [RH, Score=83.6, Expect=4e-21]} {Mouse: ENSMUSG00000007656, Arpp19, cAMP-regulated phosphoprotein 19, [RH, Score=85.1, Expect=4e-22]; ENSMUSG00000038619, Ensa, endosulfine alpha, [RH, Score=84.3, Expect=1e-21]} {Dmel: FBgn0061515, endos, endosulfine, [RH, Score=71.2, Expect=1e-16]} {Smed: dd_Smed_v6_4126_0_2, dd_Smed_v6_4126_0_2, [RH, Score=99.0, Expect=1e-27]} {RNA1509_17883, RNA1509_26901, RNA1509_5887, RNA1509_7335} {RNA1310_27715, RNA1509_17883, RNA1509_26901, RNA1509_5887, RNA1509_7335} {RNA1509_17883, RNA1509_26901, RNA1509_5887, RNA1509_7335, RNA815_12892.1} |
| 4. | MligTC455_43935 | 7749 | 161.43 | Mlig455_045402 | Neo: - Age: logFC(26M/2M)=0.435 Region-enriched R6: 1.517/0.00198 |
METTL27 | 0.963 | - | - | - | - | 0.963 | - | Mlig455_045402 {REF} {Length: 1176} {Pfam: Methyltransferase domain [PF13649.8, score=26.4]; Methyltransferase small domain [PF05175.16, score=21.7]; Methyltransferase domain [PF13489.8, score=20.0]} {Human: ENSG00000165171, METTL27, methyltransferase like 27, [Score=78.6, Expect=1e-16]} {Mouse: ENSMUSG00000040557, Mettl27, methyltransferase like 27, [Score=80.1, Expect=2e-17]} {Smed: dd_Smed_v6_5408_0_1, dd_Smed_v6_5408_0_1, [RH, Score=154, Expect=2e-46]} {RNA1509_23136} {RNA1310_39479.1} {RNA815_18819.1} |
| 5. | MligTC455_48334 | 3379 | 70.4 | Mlig455_016007, Mlig455_016011 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.240 Region-enriched R4: 1.214/0.00484 Regeneration-upregulated BL: 1.367 Regeneration-enriched BL: 1.367 |
STT3A | 0.95 | - | - | - | - | 0.950 | - | Mlig455_016007 {REF} {Length: 3367} {TRANSSPLICED} {Pfam: Oligosaccharyl transferase STT3 subunit [PF02516.16, score=490.4]; Dolichyl-phosphate-mannose-protein mannosyltransferase [PF13231.8, score=24.3]} {Human: ENSG00000134910, STT3A, STT3A, catalytic subunit of the oligosaccharyltransferase complex, [RH, Score=1080, Expect=0.0]} {Mouse: ENSMUSG00000032116, Stt3a, STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae), [RH, Score=1077, Expect=0.0]} {Dmel: FBgn0031149, Stt3A, Catalytic subunit 3A of the oligosaccharyltransferase complex, [RH, Score=1066, Expect=0.0]} {Celegans: WBGene00020437, stt-3, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3, [Score=841, Expect=0.0]} {Smed: dd_Smed_v6_1174_0_1, dd_Smed_v6_1174_0_1, [RH, Score=1102, Expect=0.0]} {RNA1509_2426} {RNA1310_7279} {RNA815_3344} Mlig455_016011 {REF} {Length: 3367} {TRANSSPLICED} {Pfam: Oligosaccharyl transferase STT3 subunit [PF02516.16, score=491.8]; Dolichyl-phosphate-mannose-protein mannosyltransferase [PF13231.8, score=24.2]} {Human: ENSG00000134910, STT3A, STT3A, catalytic subunit of the oligosaccharyltransferase complex, [RH, Score=1081, Expect=0.0]} {Mouse: ENSMUSG00000032116, Stt3a, STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae), [RH, Score=1077, Expect=0.0]} {Dmel: FBgn0031149, Stt3A, Catalytic subunit 3A of the oligosaccharyltransferase complex, [RH, Score=1066, Expect=0.0]} {Celegans: WBGene00020437, stt-3, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3, [Score=841, Expect=0.0]} {Smed: dd_Smed_v6_1174_0_1, dd_Smed_v6_1174_0_1, [RH, Score=1103, Expect=0.0]} {RNA1509_2426} {RNA1310_7279, RNA1509_2426} {RNA1509_2426, RNA815_3344} |