M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_45928

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_45928 476 9.92 Mlig455_014166

Neo: -

Age: Down-Up-Down

 Mlig455_014166 {REF} {Length: 1495} {Pfam: Sleepless protein [PF17064.7, score=38.3]; Activin types I and II receptor domain [PF01064.25, score=21.6]} {Dmel: FBgn0032021, CG7781, [Score=52.4, Expect=4e-09]} {Smed: dd_Smed_v6_3898_0_1, dd_Smed_v6_3898_0_1, [Score=57.8, Expect=2e-11]} {RNA1509_54625} {RNA1310_14520.1, RNA1509_54625} {RNA1509_54625, RNA815_1344.1}

Cumulative graph for MligTC455_45928

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.082 3.721 0.41941 1.00000
RegionR2 -0.415 3.721 0.59740 0.94881
RegionR3 0.304 3.721 0.61362 1.00000
RegionR4 0.246 3.721 0.71900 1.00000
RegionR5 0.287 3.721 0.60578 0.96313
RegionR6 0.66 3.721 0.27365 0.86303
RegionR7 0.556 3.721 0.38985 1.00000
RegionR8 -0.557 3.721 0.52998 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.247 3.721 0.19468 0.93314
RegenerationR2 -0.757 3.721 0.32088 0.75891
RegenerationR3 -0.376 3.721 0.62146 0.91718
RegenerationR4 -0.616 3.721 0.42405 0.82769
RegenerationR5 -0.3 3.721 0.68340 0.94487
RegenerationR6 -0.459 3.721 0.54230 0.83410
RegenerationBL -0.622 3.721 0.42991 0.79795
RegenerationTP 0.286 3.721 0.73919 1.00000


Genes with expression patterns similar to MligTC455_45928

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_45928 476 9.92 Mlig455_014166

Neo: -

Age: Down-Up-Down

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_014166 {REF} {Length: 1495} {Pfam: Sleepless protein [PF17064.7, score=38.3]; Activin types I and II receptor domain [PF01064.25, score=21.6]} {Dmel: FBgn0032021, CG7781, [Score=52.4, Expect=4e-09]} {Smed: dd_Smed_v6_3898_0_1, dd_Smed_v6_3898_0_1, [Score=57.8, Expect=2e-11]} {RNA1509_54625} {RNA1310_14520.1, RNA1509_54625} {RNA1509_54625, RNA815_1344.1}
2. MligTC455_49947 15947 332.23 Mlig455_032811

Neo: -

Age: Down-Down-Up

Region-enriched R7: 1.955/0.00000

 1.695 - - 0.738 0.957 - - Mlig455_032811 {REF} {Length: 1080} {RNA1509_1805, RNA1509_19404} {RNA1310_46290.1, RNA1509_1805, RNA1509_19404} {RNA1509_1805, RNA1509_19404, RNA815_17046}
3. MligTC455_53086 1893 39.44 Mlig455_048828

Neo: Int S/G2/M

Age: Down-Up-Up

Region-enriched R4: 1.328/0.00381

 DPH1 1.665 0.711 - - - 0.954 - Mlig455_048828 {REF} {Length: 1519} {TRANSSPLICED} {Pfam: Putative diphthamide synthesis protein [PF01866.19, score=378.0]} {Human: ENSG00000108963, DPH1, diphthamide biosynthesis 1, [RH, Score=437, Expect=4e-151]} {Mouse: ENSMUSG00000078789, Dph1, diphthamide biosynthesis 1, [RH, Score=431, Expect=7e-149]} {Dmel: FBgn0036194, CG11652, [RH, Score=447, Expect=5e-155]} {Celegans: WBGene00007576, dph-1, 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1, [RH, Score=442, Expect=4e-154]} {Smed: dd_Smed_v6_8665_0_1, dd_Smed_v6_8665_0_1, [RH, Score=390, Expect=4e-133]} {RNA1509_19209, RNA1509_6724} {RNA1310_16325, RNA1509_19209, RNA1509_6724} {RNA1509_19209, RNA1509_6724, RNA815_8714}
4. MligTC455_10362 37 0.77 Mlig455_046555

Neo: -

Age: -

 0.978 - - - 0.978 - - Mlig455_046555 {REF} {Length: 3814} {NoTransDecoderORF} {RNA1509_25000} {RNA1310_108245} {RNA815_2326}
5. MligTC455_17166 345 7.19 Mlig455_027093

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.882/0.03392
Region-enriched R5: 1.685/0.00547

 0.972 - - - - 0.972 - Mlig455_027093 {REF} {Length: 3541} {Pfam: Domain of unknown function (DUF4602) [PF15375.8, score=30.4]} {RNA1509_32047} {RNA1310_27922.2} {RNA815_21518}
6. MligTC455_22202 8064 168 Mlig455_002382, Mlig455_044552

Neo: -

Age: -

Regeneration-downregulated BL: -1.514

Regeneration-depleted BL: -1.514

 TAGLN3 0.971 - - - 0.971 - -

Mlig455_002382 {REF} {Length: 3420} {Pfam: Calponin homology (CH) domain [PF00307.33, score=67.9]; Calponin family repeat [PF00402.20, score=49.9]} {Human: ENSG00000144834, TAGLN3, transgelin 3, [RH, Score=148, Expect=1e-44]} {Mouse: ENSMUSG00000022658, Tagln3, transgelin 3, [RH, Score=147, Expect=7e-45]} {Dmel: FBgn0002789, Mp20, Muscle protein 20, [Score=185, Expect=6e-60]} {Celegans: WBGene00000777, cpn-1, CPN-1; CalPoNin, [Score=129, Expect=1e-37]} {Smed: dd_Smed_v6_1512_0_1, dd_Smed_v6_1512_0_1, [Score=256, Expect=6e-88]} {RNA1509_24477, RNA1509_26578, RNA1509_36683, RNA1509_51022, RNA1509_7417} {RNA1310_27238, RNA1509_24477, RNA1509_26578, RNA1509_36683, RNA1509_51022} {RNA1509_24477, RNA1509_26578, RNA1509_36683, RNA1509_51022, RNA815_11370}

Mlig455_044552 {REF} {Length: 3421} {Pfam: Calponin homology (CH) domain [PF00307.33, score=67.9]; Calponin family repeat [PF00402.20, score=49.9]} {Human: ENSG00000144834, TAGLN3, transgelin 3, [RH, Score=148, Expect=1e-44]} {Mouse: ENSMUSG00000022658, Tagln3, transgelin 3, [RH, Score=147, Expect=7e-45]} {Dmel: FBgn0002789, Mp20, Muscle protein 20, [Score=185, Expect=6e-60]} {Celegans: WBGene00000777, cpn-1, CPN-1; CalPoNin, [Score=129, Expect=1e-37]} {Smed: dd_Smed_v6_1512_0_1, dd_Smed_v6_1512_0_1, [Score=256, Expect=6e-88]} {RNA1509_7417} {RNA1310_27238, RNA1509_7417} {RNA1509_7417, RNA815_11370}
7. MligTC455_40843 30 0.63 Mlig455_003755, Mlig455_037955

Neo: -

Age: -

 0.971 - - - 0.971 - -

Mlig455_003755 {REF} {Length: 1280} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=120.7]} {Mouse: ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [Score=57.8, Expect=1e-08]} {Celegans: WBGene00016064, acd-1, [Score=48.9, Expect=6e-06]} {Smed: dd_Smed_v6_9790_0_1, dd_Smed_v6_9790_0_1, [Score=149, Expect=1e-39]}

Mlig455_037955 {REF} {Length: 1816} {RNA1509_37251} {RNA1310_31937.1} {RNA815_25998}
8. MligTC455_48483 415 8.64 Mlig455_012635

Neo: -

Age: -

 PRPSAP2 0.971 - - - 0.971 - - Mlig455_012635 {REF} {Length: 2472} {TRANSSPLICED} {Pfam: Phosphoribosyl synthetase-associated domain [PF14572.8, score=267.8]; N-terminal domain of ribose phosphate pyrophosphokinase [PF13793.8, score=122.2]; Phosphoribosyl transferase domain [PF00156.29, score=29.9]} {Human: ENSG00000141127, PRPSAP2, phosphoribosyl pyrophosphate synthetase associated protein 2, [Score=380, Expect=8e-131]; ENSG00000161542, PRPSAP1, phosphoribosyl pyrophosphate synthetase associated protein 1, [Score=363, Expect=1e-123]} {Mouse: ENSMUSG00000020528, Prpsap2, phosphoribosyl pyrophosphate synthetase-associated protein 2, [Score=378, Expect=7e-130]; ENSMUSG00000015869, Prpsap1, phosphoribosyl pyrophosphate synthetase-associated protein 1, [Score=362, Expect=3e-123]} {Dmel: FBgn0039790, CG2246, [RH, Score=430, Expect=2e-150]} {Celegans: WBGene00012258, W04G3.5, [RH, Score=408, Expect=3e-142]} {Smed: dd_Smed_v6_4658_0_1, dd_Smed_v6_4658_0_1, [RH, Score=468, Expect=1e-165]} {RNA1509_17844} {RNA1310_15004, RNA1509_17844} {RNA1509_17844, RNA815_9904}
9. MligTC455_43577 1202 25.05 Mlig455_021499, Mlig455_067383

Neo: -

Age: Down-Down-Up

 AL031281.2 0.963 - - - 0.963 - -

Mlig455_021499 {REF} {Length: 1203} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=184.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=66.1]; ADP-ribosylation factor family [PF00025.23, score=27.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.1]} {Human: ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [RH, Score=335, Expect=2e-118]; ENSG00000070831, CDC42, cell division cycle 42, [RH, Score=335, Expect=2e-118]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [RH, Score=335, Expect=1e-118]} {Dmel: FBgn0010341, Cdc42, [RH, Score=337, Expect=2e-119]} {Celegans: WBGene00000390, cdc-42, Cell division control protein 42 homolog, [RH, Score=326, Expect=2e-115]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [RH, Score=325, Expect=6e-115]} {RNA1509_43878, RNA1509_4460} {RNA1310_22711, RNA1509_43878} {RNA1509_43878, RNA815_7681.2}

Mlig455_067383 {REF} {Length: 1218} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=184.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=66.1]; ADP-ribosylation factor family [PF00025.23, score=27.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.1]} {Human: ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [RH, Score=335, Expect=2e-118]; ENSG00000070831, CDC42, cell division cycle 42, [RH, Score=335, Expect=2e-118]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [RH, Score=335, Expect=1e-118]} {Dmel: FBgn0010341, Cdc42, [RH, Score=337, Expect=2e-119]} {Celegans: WBGene00000390, cdc-42, Cell division control protein 42 homolog, [RH, Score=326, Expect=2e-115]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [RH, Score=325, Expect=6e-115]} {RNA1509_4460} {RNA1310_22711} {RNA815_7681.2}
10. MligTC455_34924 50 1.04 Mlig455_036400

Neo: -

Age: -

 0.958 - - - 0.958 - - Mlig455_036400 {REF} {Length: 1439} {NoTransDecoderORF} {RNA1310_96228}
11. MligTC455_40292 202 4.21 Mlig455_038714, Mlig455_068409, Mlig455_071120

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.666

 0.958 - - - 0.958 - -

Mlig455_038714 {REF} {Length: 995} {RNA1310_57567} {RNA815_31878}

Mlig455_068409 {REF} {Length: 993} {RNA1310_57567} {RNA815_31878}

Mlig455_071120 {REF} {Length: 1074} {RNA1310_57567} {RNA815_31878}
12. MligTC455_48391 504 10.5 Mlig455_065506

Neo: -

Age: Up-Down-Down

 A1CF 0.958 - - - - 0.958 - Mlig455_065506 {REF} {Length: 4866} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=114.0]; RNA recognition motif [PF16367.7, score=29.0]; double strand RNA binding domain from DEAD END PROTEIN 1 [PF14709.9, score=26.7]} {Human: ENSG00000148584, A1CF, APOBEC1 complementation factor, [Score=414, Expect=1e-133]} {Mouse: ENSMUSG00000052595, A1cf, APOBEC1 complementation factor, [Score=400, Expect=2e-128]; ENSMUSG00000070780, Rbm47, RNA binding motif protein 47, [Score=394, Expect=4e-126]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=333, Expect=1e-102]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=275, Expect=3e-81]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=441, Expect=2e-143]} {RNA1509_1358} {RNA1310_15318} {RNA815_6951}
13. MligTC455_48484 391 8.14 Mlig455_012644

Neo: Int S/G2/M

Age: -

 PRPSAP1 0.958 - - - 0.958 - - Mlig455_012644 {REF} {Length: 3155} {Pfam: Phosphoribosyl synthetase-associated domain [PF14572.8, score=267.5]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=145.3]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=47.6]; Phosphoribosyl transferase domain [PF00156.29, score=24.2]} {Human: ENSG00000161542, PRPSAP1, phosphoribosyl pyrophosphate synthetase associated protein 1, [Score=202, Expect=3e-60]; ENSG00000141127, PRPSAP2, phosphoribosyl pyrophosphate synthetase associated protein 2, [Score=201, Expect=3e-61]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=192, Expect=3e-55]} {Mouse: ENSMUSG00000015869, Prpsap1, phosphoribosyl pyrophosphate synthetase-associated protein 1, [Score=200, Expect=1e-59]; ENSMUSG00000020528, Prpsap2, phosphoribosyl pyrophosphate synthetase-associated protein 2, [Score=194, Expect=1e-57]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=191, Expect=5e-55]} {Dmel: FBgn0039790, CG2246, [Score=228, Expect=2e-70]} {Celegans: WBGene00012258, W04G3.5, [Score=213, Expect=2e-65]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=262, Expect=5e-82]} {RNA1509_48717} {RNA1310_16374.1} {RNA815_17008}
14. MligTC455_35702 478 9.95 Mlig455_026056

Neo: -

Age: -

 ECHDC3 0.957 - - - 0.957 - - Mlig455_026056 {REF} {Length: 2669} {TRANSSPLICED} {Pfam: Enoyl-CoA hydratase/isomerase [PF00378.22, score=176.1]; Enoyl-CoA hydratase/isomerase [PF16113.7, score=107.6]} {Human: ENSG00000134463, ECHDC3, enoyl-CoA hydratase domain containing 3, [RH, Score=262, Expect=7e-86]} {Mouse: ENSMUSG00000039063, Echdc3, enoyl Coenzyme A hydratase domain containing 3, [RH, Score=253, Expect=2e-82]} {Dmel: FBgn0034191, CG6984, [RH, Score=209, Expect=1e-65]} {Celegans: WBGene00001151, ech-2, Enoyl-CoA Hydratase, [RH, Score=204, Expect=5e-64]} {Smed: dd_Smed_v6_4330_0_1, dd_Smed_v6_4330_0_1, [RH, Score=236, Expect=9e-77]} {RNA1509_28384} {RNA1310_28620} {RNA815_15187}
15. MligTC455_39558 1462 30.46 Mlig455_064779

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.345

Region-enriched R7: 2.011/0.01373

 0.957 - - - 0.957 - - Mlig455_064779 {REF} {Length: 1146} {Pfam: Universal stress protein family [PF00582.28, score=101.3]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=120, Expect=1e-35]} {RNA1509_6489} {RNA1310_30549} {RNA815_20356}
16. MligTC455_43755 1306 27.21 Mlig455_010280

Neo: -

Age: -

Region-enriched R7: 1.117/0.04060

Regeneration-downregulated BL: -2.741

Regeneration-depleted BL: -2.741

 SMTN 0.957 - - - 0.957 - - Mlig455_010280 {REF} {Length: 2087} {Pfam: Calponin homology (CH) domain [PF00307.33, score=83.4]; Smoothelin cytoskeleton protein [PF12510.10, score=35.2]; CAMSAP CH domain [PF11971.10, score=32.4]} {Human: ENSG00000183963, SMTN, smoothelin, [RH, Score=168, Expect=2e-45]} {Mouse: ENSMUSG00000020439, Smtn, smoothelin, [RH, Score=162, Expect=2e-43]} {Dmel: FBgn0085446, CG34417, [RH, Score=160, Expect=7e-43]} {Celegans: WBGene00020530, T15B12.1, [RH, Score=144, Expect=4e-39]} {Smed: dd_Smed_v6_2554_0_1, dd_Smed_v6_2554_0_1, [RH, Score=176, Expect=2e-54]} {RNA1509_21748} {RNA1310_16112} {RNA815_14550}
17. MligTC455_49483 622 12.95 Mlig455_070527

Neo: -

Age: -

Region-specific R7: 3.606
Region-specific R8: 3.396

Region-enriched R7: 3.501/0.00000
Region-enriched R8: 3.198/0.00000

Regeneration-downregulated BL: -3.633

Regeneration-depleted BL: -3.633

 0.957 - - - 0.957 - - Mlig455_070527 {REF} {Length: 693} {Smed: dd_Smed_v6_12479_0_1, dd_Smed_v6_12479_0_1, [Score=65.1, Expect=8e-15]} {RNA1509_30340} {RNA1310_59879, RNA1509_30340} {RNA1509_30340, RNA815_30690}
18. MligTC455_04563 750 15.62 Mlig455_038799

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_038799 {REF} {Length: 2039} {RNA1509_24595, RNA1509_54341} {RNA1310_59579, RNA1509_24595} {RNA1509_24595, RNA815_27833.1}
19. MligTC455_14414 500 10.42 Mlig455_065956

Neo: -

Age: logFC(26M/2M)=2.723

 SPDEF 0.954 - - - 0.954 - - Mlig455_065956 {REF} {Length: 1405} {Pfam: Ets-domain [PF00178.24, score=67.5]} {Human: ENSG00000124664, SPDEF, SAM pointed domain containing ETS transcription factor, [Score=60.5, Expect=1e-09]} {Mouse: ENSMUSG00000024215, Spdef, SAM pointed domain containing ets transcription factor, [Score=59.7, Expect=1e-09]} {Dmel: FBgn0005659, Ets98B, Ets at 98B, [Score=70.1, Expect=6e-13]} {Celegans: WBGene00017687, ets-4, Transcription factor ets-4, [Score=60.5, Expect=5e-10]} {Smed: dd_Smed_v6_6015_0_1, dd_Smed_v6_6015_0_1, [Score=73.6, Expect=2e-14]} {RNA1509_24111} {RNA1310_27105} {RNA815_11814.1}
20. MligTC455_53105 228 4.75 Mlig455_055848

Neo: -

Age: logFC(26M/2M)=0.399

 CHRNA3 0.953 - - - 0.953 - - Mlig455_055848 {REF} {Length: 4579} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=83.8]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=97.1, Expect=2e-22]; ENSG00000138435, CHRNA1, cholinergic receptor nicotinic alpha 1 subunit, [Score=93.2, Expect=2e-21]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=99.0, Expect=3e-23]; ENSMUSG00000027107, Chrna1, cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle), [Score=97.8, Expect=6e-23]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=94.4, Expect=1e-21]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=95.1, Expect=5e-22]} {Celegans: WBGene00006774, unc-38, Acetylcholine receptor subunit alpha-type unc-38, [Score=92.8, Expect=2e-21]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=112, Expect=1e-28]} {RNA1509_35396} {RNA1310_25168.1, RNA1509_35396} {RNA1509_35396, RNA815_2979.1}
21. MligTC455_25852 257 5.35 Mlig455_026376

Neo: -

Age: Down-Up-Down

Region-enriched R7: 2.913/0.04400

 0.952 - - - 0.952 - - Mlig455_026376 {REF} {Length: 1440} {Pfam: PLAC8 family [PF04749.19, score=60.9]} {Smed: dd_Smed_v6_865_0_1, dd_Smed_v6_865_0_1, [Score=98.2, Expect=1e-26]} {RNA1509_36976} {RNA1310_18646} {RNA815_10637.1}
22. MligTC455_38245 102 2.12 Mlig455_022895

Neo: -

Age: -

 TRAPPC3 0.951 - - - 0.951 - - Mlig455_022895 {REF} {Length: 2099} {TRANSSPLICED} {Pfam: Transport protein particle (TRAPP) component [PF04051.18, score=108.1]} {Human: ENSG00000054116, TRAPPC3, trafficking protein particle complex 3, [RH, Score=241, Expect=9e-82]} {Mouse: ENSMUSG00000028847, Trappc3, trafficking protein particle complex 3, [RH, Score=241, Expect=5e-82]} {Dmel: FBgn0260859, Bet3, Blocked early in transport 3, [RH, Score=216, Expect=2e-72]} {Celegans: WBGene00014222, trpp-3, Trafficking protein particle complex subunit 3 homolog, [RH, Score=151, Expect=7e-47]} {Smed: dd_Smed_v6_4848_0_1, dd_Smed_v6_4848_0_1, [RH, Score=217, Expect=6e-73]} {RNA1509_14723, RNA1509_39792} {RNA1310_13044, RNA1509_14723, RNA1509_39792} {RNA1509_14723, RNA1509_39792, RNA815_22426}
23. MligTC455_52500 1490 31.04 Mlig455_033780

Neo: -

Age: -

Region-enriched R5: 1.829/0.00370
Region-enriched R6: 1.816/0.03386
Region-enriched R4: 1.792/0.02525

 GRHPR 0.951 - - - - 0.951 - Mlig455_033780 {REF} {Length: 1458} {TRANSSPLICED} {Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain [PF02826.21, score=169.4]; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain [PF00389.32, score=55.1]; NAD binding domain of 6-phosphogluconate dehydrogenase [PF03446.17, score=19.9]} {Human: ENSG00000137106, GRHPR, glyoxylate and hydroxypyruvate reductase, [Score=164, Expect=1e-47]} {Mouse: ENSMUSG00000035637, Grhpr, glyoxylate reductase/hydroxypyruvate reductase, [Score=156, Expect=1e-44]} {Dmel: FBgn0051674, CG31674, [Score=151, Expect=8e-43]} {Celegans: WBGene00007836, C31C9.2, [Score=102, Expect=8e-25]} {Smed: dd_Smed_v6_8767_0_1, dd_Smed_v6_8767_0_1, [Score=174, Expect=7e-52]} {RNA1509_6635} {RNA1310_17744} {RNA815_8969}
24. MligTC455_53279 2935 61.14 Mlig455_017965

Neo: -

Age: Down-Up-Down

Region-specific R8: 3.606
Region-specific R7: 3.119

Region-enriched R8: 3.165/0.00000
Region-enriched R7: 2.525/0.00000

Regeneration-downregulated BL: -2.902

Regeneration-depleted BL: -2.902

 0.951 - - - 0.951 - - Mlig455_017965 {REF} {Length: 1023} {RNA1509_20769, RNA1509_34269} {RNA1310_44808, RNA1509_20769, RNA1509_34269} {RNA1509_20769, RNA1509_34269, RNA815_8213}
25. MligTC455_18421 221 4.61 Mlig455_051563

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.356

 GGPS1 0.95 - - - 0.950 - - Mlig455_051563 {REF} {Length: 1568} {TRANSSPLICED} {Pfam: Polyprenyl synthetase [PF00348.19, score=214.9]} {Human: ENSG00000152904, GGPS1, geranylgeranyl diphosphate synthase 1, [RH, Score=312, Expect=5e-106]} {Mouse: ENSMUSG00000021302, Ggps1, geranylgeranyl diphosphate synthase 1, [RH, Score=316, Expect=9e-108]} {Dmel: FBgn0019662, qm, quemao, [RH, Score=276, Expect=1e-91]} {Celegans: WBGene00000761, coq-1, COenzyme Q (Ubiquinone) biosynthesis, [Score=61.6, Expect=1e-10]} {Smed: dd_Smed_v6_7235_0_2, dd_Smed_v6_7235_0_2, [RH, Score=300, Expect=2e-101]} {RNA1509_28048, RNA1509_33893} {RNA1310_30605, RNA1509_33893} {RNA1509_33893, RNA815_14345}
26. MligTC455_37868 378 7.87 Mlig455_056774

Neo: Germline

Age: Up-Down-Down

Region-enriched R7: 1.835/0.04736
Region-enriched R4: 1.456/0.03602

 0.95 - - - 0.950 - - Mlig455_056774 {REF} {Length: 1878} {Pfam: Tetraspanin family [PF00335.22, score=74.2]} {RNA1509_31602, RNA1509_37087} {RNA1310_5555, RNA1509_31602, RNA1509_37087} {RNA1509_31602, RNA1509_37087, RNA815_1574.2}
27. MligTC455_47639 256 5.34 Mlig455_046133

Neo: -

Age: -

 USF2 0.95 - - - 0.950 - - Mlig455_046133 {REF} {Length: 1681} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=50.4]} {Human: ENSG00000105698, USF2, upstream transcription factor 2, c-fos interacting, [Score=59.3, Expect=1e-09]} {Mouse: ENSMUSG00000058239, Usf2, upstream transcription factor 2, [Score=57.8, Expect=6e-09]} {Dmel: FBgn0029711, Usf, [Score=54.7, Expect=5e-08]} {Smed: dd_Smed_v6_4871_0_1, dd_Smed_v6_4871_0_1, [RH, Score=55.5, Expect=2e-08]} {RNA1509_24437} {RNA1310_26406} {RNA815_7684}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA