Data search
Results for MligTC455_04563
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_04563 | 750 | 15.62 | Mlig455_038799 | Neo: - Age: - |
Mlig455_038799 {REF} {Length: 2039} {RNA1509_24595, RNA1509_54341} {RNA1310_59579, RNA1509_24595} {RNA1509_24595, RNA815_27833.1} |
Cumulative graph for MligTC455_04563
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.318 | 4.267 | 0.24731 | 0.89418 | |
| RegionR2 | 0.131 | 4.267 | 0.74855 | 1.00000 | |
| RegionR3 | 0.121 | 4.267 | 0.70969 | 1.00000 | |
| RegionR4 | 0.903 | 4.267 | 0.01556 | 0.08486 | |
| RegionR5 | 0.472 | 4.267 | 0.10424 | 0.31366 | |
| RegionR6 | 0.241 | 4.267 | 0.46838 | 1.00000 | |
| RegionR7 | -0.331 | 4.267 | 0.45965 | 1.00000 | |
| RegionR8 | -0.22 | 4.267 | 0.67200 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.893 | 4.267 | 0.22834 | 0.95929 | |
| RegenerationR2 | -0.661 | 4.267 | 0.04486 | 0.35043 | |
| RegenerationR3 | -0.242 | 4.267 | 0.49082 | 0.85425 | |
| RegenerationR4 | -0.51 | 4.267 | 0.15210 | 0.58122 | |
| RegenerationR5 | -0.181 | 4.267 | 0.56454 | 0.89368 | |
| RegenerationR6 | -0.076 | 4.267 | 0.83395 | 0.99312 | |
| RegenerationBL | 0.291 | 4.267 | 0.52286 | 0.88402 | |
| RegenerationTP | -0.104 | 4.267 | 0.83487 | 1.00000 |
Genes with expression patterns similar to MligTC455_04563
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_04563 | 750 | 15.62 | Mlig455_038799 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_038799 {REF} {Length: 2039} {RNA1509_24595, RNA1509_54341} {RNA1310_59579, RNA1509_24595} {RNA1509_24595, RNA815_27833.1} | |
| 2. | MligTC455_04564 | 742 | 15.45 | Mlig455_038816 | Neo: - Age: Down-Up-Down |
GET4 | 5.933 | 0.995 | 0.987 | 0.995 | 0.997 | 0.961 | 0.998 | Mlig455_038816 {REF} {Length: 3703} {TRANSSPLICED} {Pfam: Golgi to ER traffic protein 4 [PF04190.15, score=170.8]} {Human: ENSG00000239857, GET4, golgi to ER traffic protein 4, [RH, Score=201, Expect=5e-62]} {Mouse: ENSMUSG00000025858, Get4, golgi to ER traffic protein 4, [RH, Score=186, Expect=2e-56]} {Dmel: FBgn0086605, CG9853, [RH, Score=145, Expect=6e-41]} {Smed: dd_Smed_v6_7734_0_1, dd_Smed_v6_7734_0_1, [RH, Score=169, Expect=4e-50]} {RNA1509_32148, RNA1509_54341} {RNA1310_28338.1, RNA1509_54341} {RNA1509_54341, RNA815_12431} |
| 3. | MligTC455_15916 | 605 | 12.6 | Mlig455_057343 | Neo: Int S/G2/M Age: - |
RANBP3 | 1.77 | - | - | - | 0.812 | 0.958 | - | Mlig455_057343 {REF} {Length: 3857} {TRANSSPLICED} {Pfam: RanBP1 domain [PF00638.20, score=35.9]} {Human: ENSG00000031823, RANBP3, RAN binding protein 3, [RH, Score=121, Expect=4e-29]} {Mouse: ENSMUSG00000002372, Ranbp3, RAN binding protein 3, [RH, Score=116, Expect=8e-28]} {Dmel: FBgn0039110, RanBP3, Ran binding protein 3, [RH, Score=77.0, Expect=6e-15]} {Smed: dd_Smed_v6_8752_0_1, dd_Smed_v6_8752_0_1, [RH, Score=83.6, Expect=1e-17]} {RNA1509_14083, RNA1509_38534} {RNA1310_16509.2, RNA1509_14083, RNA1509_38534} {RNA1509_14083, RNA1509_38534, RNA815_7036} |
| 4. | MligTC455_43778 | 880 | 18.33 | Mlig455_041613 | Neo: - Age: - Region-enriched R4: 1.061/0.03397 |
WDR45 | 1.729 | - | - | - | 0.956 | 0.773 | - | Mlig455_041613 {REF} {Length: 2756} {Pfam: WD domain, G-beta repeat [PF00400.34, score=34.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=24.0]} {Human: ENSG00000196998, WDR45, WD repeat domain 45, [RH, Score=214, Expect=8e-66]} {Mouse: ENSMUSG00000039382, Wdr45, WD repeat domain 45, [Score=216, Expect=5e-67]} {Dmel: FBgn0037648, CG11975, [Score=163, Expect=8e-47]} {Celegans: WBGene00012641, epg-6, Ectopic P Granules, [Score=92.8, Expect=1e-20]} {Smed: dd_Smed_v6_4178_0_1, dd_Smed_v6_4178_0_1, [Score=144, Expect=2e-39]} {RNA1509_10583, RNA1509_29232} {RNA1310_6509.1, RNA1509_10583, RNA1509_29232} {RNA1509_10583, RNA1509_29232, RNA815_2908} |
| 5. | MligTC455_43779 | 878 | 18.3 | Mlig455_041635 | Neo: - Age: Up-Down-Up Region-enriched R4: 1.074/0.03063 |
WDR45 | 1.726 | - | - | - | 0.956 | 0.770 | - | Mlig455_041635 {REF} {Length: 2705} {Pfam: WD domain, G-beta repeat [PF00400.34, score=34.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=24.0]} {Human: ENSG00000196998, WDR45, WD repeat domain 45, [RH, Score=216, Expect=1e-66]} {Mouse: ENSMUSG00000039382, Wdr45, WD repeat domain 45, [Score=219, Expect=7e-68]} {Dmel: FBgn0037648, CG11975, [Score=162, Expect=1e-46]} {Celegans: WBGene00012641, epg-6, Ectopic P Granules, [Score=92.8, Expect=1e-20]} {Smed: dd_Smed_v6_4178_0_1, dd_Smed_v6_4178_0_1, [Score=144, Expect=2e-39]} {RNA1509_10583} {RNA1310_6509.1} {RNA815_2908} |
| 6. | MligTC455_39597 | 1580 | 32.92 | Mlig455_039163 | Neo: - Age: - |
SRSF10 | 1.713 | - | - | - | 0.953 | - | 0.760 | Mlig455_039163 {REF} {Length: 2049} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=66.5]} {Human: ENSG00000188529, SRSF10, serine and arginine rich splicing factor 10, [RH, Score=89.7, Expect=2e-20]} {Mouse: ENSMUSG00000028676, Srsf10, serine/arginine-rich splicing factor 10, [RH, Score=89.7, Expect=1e-20]; ENSMUSG00000054679, Srsf12, serine/arginine-rich splicing factor 12, [RH, Score=88.6, Expect=3e-20]} {Dmel: FBgn0263829, CG34334, [Score=64.7, Expect=2e-11]} {Celegans: WBGene00004387, rnp-4, RNA-binding protein 8A, [Score=65.1, Expect=5e-13]} {Smed: dd_Smed_v6_661_0_6, dd_Smed_v6_661_0_6, [RH, Score=102, Expect=1e-27]} {RNA1509_16371, RNA1509_1745, RNA1509_26324, RNA1509_30864} {RNA1310_13715.1, RNA1509_16371, RNA1509_26324, RNA1509_30864} {RNA1509_16371, RNA1509_26324, RNA1509_30864, RNA815_18153} |
| 7. | MligTC455_35847 | 882 | 18.38 | Mlig455_004441, Mlig455_004451 | Neo: - Age: logFC(26M/2M)=-0.229 |
KATNB1 | 1.688 | - | - | 0.735 | 0.953 | - | - | Mlig455_004441 {REF} {Length: 4219} {Pfam: con80 domain of Katanin [PF13925.8, score=131.9]; WD domain, G-beta repeat [PF00400.34, score=106.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=46.1]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=20.8]; Cytochrome D1 heme domain [PF02239.18, score=17.5]} {Human: ENSG00000140854, KATNB1, katanin regulatory subunit B1, [Score=419, Expect=7e-138]} {Mouse: ENSMUSG00000031787, Katnb1, katanin p80 (WD40-containing) subunit B 1, [Score=410, Expect=1e-134]} {Dmel: FBgn0040207, kat80, katanin 80, [Score=167, Expect=2e-43]} {Celegans: WBGene00006481, plrg-1, PLeiotropic ReGulator (Vertebrate) homolog, [Score=98.2, Expect=2e-21]} {Smed: dd_Smed_v6_5495_0_1, dd_Smed_v6_5495_0_1, [Score=357, Expect=2e-114]} {RNA1509_34529, RNA1509_39659, RNA1509_44028, RNA1509_52734, RNA1509_59605} {RNA1310_6601, RNA1509_39659, RNA1509_44028, RNA1509_52734, RNA1509_59605} {RNA1509_39659, RNA1509_44028, RNA1509_52734, RNA1509_59605, RNA815_13009} Mlig455_004451 {REF} {Length: 4732} {Pfam: con80 domain of Katanin [PF13925.8, score=133.5]; WD domain, G-beta repeat [PF00400.34, score=109.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=44.9]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=19.6]; Cytochrome D1 heme domain [PF02239.18, score=17.5]} {Human: ENSG00000140854, KATNB1, katanin regulatory subunit B1, [Score=426, Expect=2e-140]} {Mouse: ENSMUSG00000031787, Katnb1, katanin p80 (WD40-containing) subunit B 1, [Score=414, Expect=6e-136]} {Dmel: FBgn0040207, kat80, katanin 80, [Score=170, Expect=3e-44]} {Celegans: WBGene00006481, plrg-1, PLeiotropic ReGulator (Vertebrate) homolog, [Score=101, Expect=2e-22]} {Smed: dd_Smed_v6_5495_0_1, dd_Smed_v6_5495_0_1, [Score=362, Expect=2e-116]} {RNA1509_17080, RNA1509_52675} {RNA1310_6601, RNA1509_52675} {RNA1509_52675, RNA815_13009} |
| 8. | MligTC455_35766 | 2077 | 43.28 | Mlig455_036201 | Neo: - Age: logFC(26M/2M)=0.606 Regeneration-enriched R6: 1.830 |
HNRNPL | 0.965 | - | - | - | 0.965 | - | - | Mlig455_036201 {REF} {Length: 3072} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=117.9]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=84.5]; Occluded RNA-recognition motif [PF16842.7, score=33.5]; RRM-like domain [PF11835.10, score=32.1]} {Human: ENSG00000282947, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=223, Expect=2e-64]; ENSG00000104824, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=223, Expect=2e-64]} {Mouse: ENSMUSG00000015165, Hnrnpl, heterogeneous nuclear ribonucleoprotein L, [Score=224, Expect=8e-65]} {Dmel: FBgn0003435, sm, smooth, [Score=224, Expect=3e-66]} {Celegans: WBGene00016624, C44B7.2, [Score=192, Expect=2e-53]} {Smed: dd_Smed_v6_7465_0_1, dd_Smed_v6_7465_0_1, [Score=233, Expect=5e-68]} {RNA1509_2750} {RNA1310_3778.1, RNA1509_2750} {RNA1509_2750, RNA815_9958} |
| 9. | MligTC455_35765 | 2122 | 44.2 | Mlig455_005545 | Neo: - Age: - Regeneration-enriched R6: 1.822 |
HNRNPL | 0.958 | - | - | - | 0.958 | - | - | Mlig455_005545 {REF} {Length: 3613} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=118.6]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=85.2]; Occluded RNA-recognition motif [PF16842.7, score=34.2]; RRM-like domain [PF11835.10, score=32.1]} {Human: ENSG00000282947, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=225, Expect=4e-65]; ENSG00000104824, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=225, Expect=4e-65]} {Mouse: ENSMUSG00000015165, Hnrnpl, heterogeneous nuclear ribonucleoprotein L, [Score=225, Expect=2e-65]} {Dmel: FBgn0003435, sm, smooth, [Score=225, Expect=2e-66]} {Celegans: WBGene00016624, C44B7.2, [Score=189, Expect=2e-52]} {Smed: dd_Smed_v6_7465_0_1, dd_Smed_v6_7465_0_1, [Score=234, Expect=2e-68]} {RNA1509_24811, RNA1509_8468} {RNA1310_3778.1, RNA1509_24811, RNA1509_8468} {RNA1509_24811, RNA1509_8468, RNA815_9958} |
| 10. | MligTC455_22520 | 1063 | 22.15 | Mlig455_000386, Mlig455_067959 | Neo: Irradiation Age: Up-Down-Down |
TRANK1 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_000386 {REF} {Length: 10595} {TRANSSPLICED} {Pfam: AAA domain [PF13245.8, score=31.4]; UvrD/REP helicase N-terminal domain [PF00580.23, score=28.5]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.6]} {Human: ENSG00000168016, TRANK1, tetratricopeptide repeat and ankyrin repeat containing 1, [RH, Score=676, Expect=0.0]} {Mouse: ENSMUSG00000062296, Trank1, tetratricopeptide repeat and ankyrin repeat containing 1, [RH, Score=667, Expect=0.0]} {RNA1509_45240, RNA1509_48487} {RNA1310_139, RNA1509_45240} {RNA1509_45240, RNA815_523} Mlig455_067959 {REF} {Length: 11658} {TRANSSPLICED} {Pfam: AAA domain [PF13245.8, score=31.4]; UvrD/REP helicase N-terminal domain [PF00580.23, score=29.4]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.8]} {Human: ENSG00000168016, TRANK1, tetratricopeptide repeat and ankyrin repeat containing 1, [RH, Score=679, Expect=0.0]} {Mouse: ENSMUSG00000062296, Trank1, tetratricopeptide repeat and ankyrin repeat containing 1, [RH, Score=667, Expect=0.0]} {RNA1509_26643, RNA1509_4147, RNA1509_52069} {RNA1310_139, RNA1509_26643, RNA1509_4147, RNA1509_52069} {RNA1509_26643, RNA1509_4147, RNA1509_52069, RNA815_523} |
| 11. | MligTC455_45958 | 368 | 7.67 | Mlig455_018257 | Neo: Int S/G2/M Age: - |
YOD1 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_018257 {REF} {Length: 1722} {TRANSSPLICED} {Pfam: OTU-like cysteine protease [PF02338.21, score=26.8]} {Human: ENSG00000180667, YOD1, YOD1 deubiquitinase, [RH, Score=191, Expect=6e-58]} {Mouse: ENSMUSG00000046404, Yod1, YOD1 deubiquitinase, [RH, Score=188, Expect=5e-57]} {Dmel: FBgn0035593, CG4603, [RH, Score=211, Expect=5e-66]} {Smed: dd_Smed_v6_6696_0_1, dd_Smed_v6_6696_0_1, [RH, Score=194, Expect=8e-60]} {RNA1509_30029} {RNA1310_15893, RNA1509_30029} {RNA1509_30029, RNA815_6871} |
| 12. | MligTC455_45928 | 476 | 9.92 | Mlig455_014166 | Neo: - Age: Down-Up-Down |
0.954 | - | - | - | - | 0.954 | - | Mlig455_014166 {REF} {Length: 1495} {Pfam: Sleepless protein [PF17064.7, score=38.3]; Activin types I and II receptor domain [PF01064.25, score=21.6]} {Dmel: FBgn0032021, CG7781, [Score=52.4, Expect=4e-09]} {Smed: dd_Smed_v6_3898_0_1, dd_Smed_v6_3898_0_1, [Score=57.8, Expect=2e-11]} {RNA1509_54625} {RNA1310_14520.1, RNA1509_54625} {RNA1509_54625, RNA815_1344.1} | |
| 13. | MligTC455_20753 | 657 | 13.69 | Mlig455_062670 | Neo: Irradiation Age: Up-Down-Down Region-enriched R5: 1.500/0.00906 |
ZC3H3 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_062670 {REF} {Length: 4965} {TRANSSPLICED} {Pfam: WWE domain [PF02825.22, score=21.2]} {Human: ENSG00000014164, ZC3H3, zinc finger CCCH-type containing 3, [Score=52.0, Expect=6e-06]} {RNA1509_28005} {RNA1310_18286, RNA1509_28005} {RNA1509_28005, RNA815_8747} |
| 14. | MligTC455_50175 | 681 | 14.19 | Mlig455_049630 | Neo: - Age: - |
TEX261 | 0.952 | - | - | 0.952 | - | - | - | Mlig455_049630 {REF} {Length: 2273} {TRANSSPLICED} {Pfam: Transmembrane adaptor Erv26 [PF04148.15, score=124.9]} {Human: ENSG00000144043, TEX261, testis expressed 261, [Score=150, Expect=3e-45]} {Mouse: ENSMUSG00000014748, Tex261, testis expressed gene 261, [Score=150, Expect=1e-45]} {Dmel: FBgn0034849, CG3500, [Score=119, Expect=2e-33]} {Smed: dd_Smed_v6_10021_0_1, dd_Smed_v6_10021_0_1, [Score=117, Expect=1e-32]} {RNA1509_45542} {RNA1310_11823, RNA1509_45542} {RNA1509_45542, RNA815_17541.1} |
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