Data search
Results for MligTC455_46056
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_46056 | 15 | 0.30 | Mlig455_026871 | Neo: - Age: - |
PCBD1 | Mlig455_026871 {REF} {Length: 510} {TRANSSPLICED} {Pfam: Pterin 4 alpha carbinolamine dehydratase [PF01329.21, score=104.4]} {Human: ENSG00000166228, PCBD1, pterin-4 alpha-carbinolamine dehydratase 1, [RH, Score=125, Expect=9e-38]} {Mouse: ENSMUSG00000020098, Pcbd1, pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1, [RH, Score=126, Expect=2e-38]} {Dmel: FBgn0024841, Pcd, pterin-4a-carbinolamine dehydratase, [RH, Score=130, Expect=8e-39]} {Celegans: WBGene00020397, pcbd-1, Putative pterin-4-alpha-carbinolamine dehydratase, [RH, Score=128, Expect=7e-39]} {Smed: dd_Smed_v6_1214_0_1, dd_Smed_v6_1214_0_1, [RH, Score=114, Expect=7e-34]} {RNA1509_56343} {RNA1310_47859.1} {RNA815_17315.2} |
Cumulative graph for MligTC455_46056
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.811 | 0.788 | 0.99962 | 1.00000 | |
| RegionR2 | -1.492 | 0.788 | 0.97911 | 1.00000 | |
| RegionR3 | -1.627 | 0.788 | 0.99983 | 1.00000 | |
| RegionR4 | 5.577 | 0.788 | 0.00840 | 0.05355 | |
| RegionR5 | 3.124 | 0.788 | 0.04568 | 0.17564 | |
| RegionR6 | 3.233 | 0.788 | 0.03326 | 0.34000 | |
| RegionR7 | -1.775 | 0.788 | 1.00000 | 1.00000 | |
| RegionR8 | -1.229 | 0.788 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.767 | 0.788 | 1.00000 | 1.00000 | |
| RegenerationR2 | -0.791 | 0.788 | 0.39135 | 0.80883 | |
| RegenerationR3 | -0.392 | 0.788 | 0.63635 | 0.92341 | |
| RegenerationR4 | -2.537 | 0.788 | 0.11258 | 0.51436 | |
| RegenerationR5 | 0.003 | 0.788 | 0.63697 | 0.92542 | |
| RegenerationR6 | -2.893 | 0.788 | 0.01536 | 0.15270 | |
| RegenerationBL | -3.856 | 0.788 | 0.99987 | 1.00000 | |
| RegenerationTP | -2.309 | 0.788 | 0.99990 | 1.00000 |
Genes with expression patterns similar to MligTC455_46056
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_46056 | 15 | 0.3 | Mlig455_026871 | Neo: - Age: - |
PCBD1 | 3 | - | - | 1.000 | 1.000 | - | 1.000 | Mlig455_026871 {REF} {Length: 510} {TRANSSPLICED} {Pfam: Pterin 4 alpha carbinolamine dehydratase [PF01329.21, score=104.4]} {Human: ENSG00000166228, PCBD1, pterin-4 alpha-carbinolamine dehydratase 1, [RH, Score=125, Expect=9e-38]} {Mouse: ENSMUSG00000020098, Pcbd1, pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1, [RH, Score=126, Expect=2e-38]} {Dmel: FBgn0024841, Pcd, pterin-4a-carbinolamine dehydratase, [RH, Score=130, Expect=8e-39]} {Celegans: WBGene00020397, pcbd-1, Putative pterin-4-alpha-carbinolamine dehydratase, [RH, Score=128, Expect=7e-39]} {Smed: dd_Smed_v6_1214_0_1, dd_Smed_v6_1214_0_1, [RH, Score=114, Expect=7e-34]} {RNA1509_56343} {RNA1310_47859.1} {RNA815_17315.2} |
| 2. | MligTC455_52419 | 214 | 4.46 | Mlig455_036527 | Neo: Irradiation Age: Down-Down-Up Region-enriched R5: 4.262/0.00000 |
1.694 | - | - | - | 0.739 | - | 0.955 | Mlig455_036527 {REF} {Length: 2552} {Smed: dd_Smed_v6_2845_0_1, dd_Smed_v6_2845_0_1, [RH, Score=47.8, Expect=2e-07]} {RNA1509_3969} {RNA1310_16554, RNA1509_3969} {RNA1509_3969, RNA815_8939} | |
| 3. | MligTC455_17619 | 76 | 1.59 | Mlig455_005093 | Neo: - Age: - |
0.99 | - | - | 0.990 | - | - | - | Mlig455_005093 {REF} {Length: 3954} {RNA1509_53420} {RNA1310_15850.2} {RNA815_30934} | |
| 4. | MligTC455_28164 | 136 | 2.83 | Mlig455_045835 | Neo: - Age: - |
LRRC9 | 0.977 | - | - | 0.977 | - | - | - | Mlig455_045835 {REF} {Length: 10638} {Pfam: Leucine-rich repeat [PF14580.8, score=159.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=149.0]; Leucine rich repeat [PF13855.8, score=111.3]} {Human: ENSG00000131951, LRRC9, leucine rich repeat containing 9, [RH, Score=436, Expect=2e-129]} {Mouse: ENSMUSG00000021090, Lrrc9, leucine rich repeat containing 9, [RH, Score=639, Expect=0.0]} {Dmel: FBgn0039728, CG7896, [Score=74.7, Expect=6e-13]} {Celegans: WBGene00020266, T05H4.3, [RH, Score=80.1, Expect=8e-15]} {Smed: dd_Smed_v6_14851_0_1, dd_Smed_v6_14851_0_1, [RH, Score=369, Expect=2e-108]} {RNA1509_22179, RNA1509_44615} {RNA1310_1731, RNA1509_44615} {RNA1509_44615, RNA815_589.1} |
| 5. | MligTC455_19108 | 277 | 5.78 | Mlig455_002320 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.754/0.03282 |
PSMC3IP | 0.959 | - | - | - | - | - | 0.959 | Mlig455_002320 {REF} {Length: 1692} {TRANSSPLICED} {Pfam: TBPIP/Hop2 winged helix domain [PF07106.15, score=92.3]; Leucine zipper with capping helix domain [PF18517.3, score=39.8]; Filament-like plant protein, long coiled-coil [PF05911.13, score=21.4]; Penicillinase repressor [PF03965.18, score=19.7]} {Human: ENSG00000131470, PSMC3IP, PSMC3 interacting protein, [RH, Score=130, Expect=4e-37]} {Mouse: ENSMUSG00000019303, Psmc3ip, proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein, [RH, Score=147, Expect=9e-44]} {Smed: dd_Smed_v6_15163_0_1, dd_Smed_v6_15163_0_1, [RH, Score=138, Expect=1e-40]} {RNA1509_18951, RNA1509_36312} {RNA1310_38683, RNA1509_18951, RNA1509_36312} {RNA1509_18951, RNA1509_36312, RNA815_16821} |
| 6. | MligTC455_40769 | 26 | 0.54 | Mlig455_007570 | Neo: - Age: - |
SIX1 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_007570 {REF} {Length: 3034} {Pfam: Transcriptional regulator, SIX1, N-terminal SD domain [PF16878.7, score=158.1]; Homeodomain [PF00046.31, score=52.2]; Homeobox KN domain [PF05920.13, score=46.6]} {Human: ENSG00000126778, SIX1, SIX homeobox 1, [RH, Score=343, Expect=3e-116]; ENSG00000170577, SIX2, SIX homeobox 2, [RH, Score=341, Expect=4e-115]} {Mouse: ENSMUSG00000051367, Six1, sine oculis-related homeobox 1, [RH, Score=343, Expect=2e-116]; ENSMUSG00000024134, Six2, sine oculis-related homeobox 2, [RH, Score=342, Expect=1e-115]} {Dmel: FBgn0003460, so, sine oculis, [RH, Score=343, Expect=1e-114]} {Celegans: WBGene00000454, ceh-33, Homeobox protein ceh-33, [RH, Score=254, Expect=3e-82]} {Smed: dd_Smed_v6_9774_0_1, dd_Smed_v6_9774_0_1, [RH, Score=357, Expect=5e-119]} {RNA1509_55511} {RNA1310_57635} {RNA815_51085} |
| 7. | MligTC455_45878 | 89 | 1.85 | Mlig455_067741 | Neo: - Age: Up-Down-Up |
ABCC10 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_067741 {REF} {Length: 6863} {TRANSSPLICED} {Pfam: ABC transporter transmembrane region [PF00664.25, score=209.5]; ABC transporter [PF00005.29, score=175.7]; RecF/RecN/SMC N terminal domain [PF02463.21, score=42.5]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=29.9]; AAA ATPase domain [PF13191.8, score=27.2]; P-loop containing region of AAA domain [PF13555.8, score=26.0]; AAA domain [PF13401.8, score=23.9]; RsgA GTPase [PF03193.18, score=23.8]; AAA domain [PF13476.8, score=23.3]; 50S ribosome-binding GTPase [PF01926.25, score=21.9]; Double-GTPase 2 [PF19993.1, score=19.6]} {Human: ENSG00000124574, ABCC10, ATP binding cassette subfamily C member 10, [Score=786, Expect=0.0]} {Mouse: ENSMUSG00000023088, Abcc1, ATP-binding cassette, sub-family C (CFTR/MRP), member 1, [Score=709, Expect=0.0]; ENSMUSG00000020865, Abcc3, ATP-binding cassette, sub-family C (CFTR/MRP), member 3, [Score=706, Expect=0.0]; ENSMUSG00000025194, Abcc2, ATP-binding cassette, sub-family C (CFTR/MRP), member 2, [Score=683, Expect=0.0]} {Dmel: FBgn0032456, MRP, Multidrug-Resistance like Protein 1, [Score=707, Expect=0.0]} {Celegans: WBGene00003407, mrp-1, Multidrug resistance-associated protein, [Score=657, Expect=0.0]} {Smed: dd_Smed_v6_3982_0_1, dd_Smed_v6_3982_0_1, [Score=691, Expect=0.0]} {RNA1509_16356} {RNA1310_1136.1} {RNA815_24256} |
| 8. | MligTC455_38966 | 79 | 1.65 | Mlig455_032200, Mlig455_054191 | Neo: - Age: Up-Down-Down |
UTRN | 0.951 | - | - | - | 0.951 | - | - | Mlig455_032200 {REF} {Length: 2203} {Human: ENSG00000152818, UTRN, utrophin, [Score=65.9, Expect=8e-12]} {Mouse: ENSMUSG00000019820, Utrn, utrophin, [Score=62.8, Expect=6e-11]} {Dmel: FBgn0260003, Dys, Dystrophin, [Score=58.2, Expect=1e-09]} {Smed: dd_Smed_v6_5325_0_1, dd_Smed_v6_5325_0_1, [Score=91.3, Expect=4e-21]} {RNA1509_38827} {RNA1310_32833} {RNA815_17087} Mlig455_054191 {REF} {Length: 7646} {Pfam: EF-hand [PF09069.13, score=126.3]; EF hand [PF09068.13, score=102.4]; Zinc finger, ZZ type [PF00569.19, score=36.5]; WW domain [PF00397.28, score=19.9]} {Human: ENSG00000152818, UTRN, utrophin, [RH, Score=493, Expect=2e-140]; ENSG00000198947, DMD, dystrophin, [RH, Score=491, Expect=8e-145]} {Mouse: ENSMUSG00000045103, Dmd, dystrophin, muscular dystrophy, [RH, Score=488, Expect=4e-139]; ENSMUSG00000019820, Utrn, utrophin, [RH, Score=485, Expect=5e-138]} {Dmel: FBgn0260003, Dys, Dystrophin, [RH, Score=520, Expect=1e-155]} {Celegans: WBGene00001131, dys-1, Dystrophin-1, [RH, Score=344, Expect=1e-94]} {Smed: dd_Smed_v6_5325_0_3, dd_Smed_v6_5325_0_3, [RH, Score=302, Expect=7e-82]} {RNA1509_38827} {RNA1310_24533} {RNA815_12379} |
| 9. | MligTC455_43445 | 98 | 2.05 | Mlig455_043288 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_043288 {REF} {Length: 1770} {TRANSSPLICED} {Pfam: NICE-3 protein [PF07406.13, score=86.6]} {Dmel: FBgn0034172, CG6665, [Score=57.8, Expect=2e-09]} {RNA1509_24375} {RNA1310_15514.2} {RNA815_13288} |
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