Data search
Results for MligTC455_46128
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_46128 | 405 | 8.45 | Mlig455_009070 | Neo: Int S/G2/M |
Mlig455_009070 {REF} {Length: 2786} {RNA1509_26637, RNA1509_34188} {RNA1310_30874, RNA1509_26637} {RNA1509_26637, RNA815_17123} |
Cumulative graph for MligTC455_46128
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.279 | 3.497 | 0.81651 | 1.00000 | |
| RegionR2 | 0.208 | 3.497 | 0.74281 | 1.00000 | |
| RegionR3 | -0.639 | 3.497 | 0.21054 | 0.75194 | |
| RegionR4 | 0.995 | 3.497 | 0.05939 | 0.21661 | |
| RegionR5 | 0.776 | 3.497 | 0.06050 | 0.21448 | |
| RegionR6 | -0.071 | 3.497 | 0.88721 | 1.00000 | |
| RegionR7 | -0.85 | 3.497 | 0.23427 | 0.85853 | |
| RegionR8 | -0.14 | 3.497 | 0.85971 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.373 | 3.497 | 0.38128 | 1.00000 | |
| RegenerationR2 | 0.272 | 3.497 | 0.62577 | 0.92523 | |
| RegenerationR3 | 0.967 | 3.497 | 0.12005 | 0.53820 | |
| RegenerationR4 | -0.603 | 3.497 | 0.28653 | 0.73143 | |
| RegenerationR5 | 0.087 | 3.497 | 0.86009 | 1.00000 | |
| RegenerationR6 | 0.202 | 3.497 | 0.75218 | 0.95340 | |
| RegenerationBL | 0.216 | 3.497 | 0.80149 | 1.00000 | |
| RegenerationTP | 1.745 | 3.497 | 0.01464 | 0.20710 |
Genes with expression patterns similar to MligTC455_46128
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_46128 | 405 | 8.45 | Mlig455_009070 | Neo: Int S/G2/M |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_009070 {REF} {Length: 2786} {RNA1509_26637, RNA1509_34188} {RNA1310_30874, RNA1509_26637} {RNA1509_26637, RNA815_17123} | |
| 2. | MligTC455_46129 | 328 | 6.83 | Mlig455_058113 | Neo: - Age: - |
2.945 | 0.974 | 0.983 | - | - | - | 0.988 | Mlig455_058113 {REF} {Length: 2107} {TRANSSPLICED} {RNA1509_34188} {RNA1310_30874} {RNA815_17123} | |
| 3. | MligTC455_52190 | 488 | 10.17 | Mlig455_065357 | Neo: Int S/G2/M Age: - |
SMNDC1 | 2.538 | 0.765 | - | - | 0.816 | - | 0.957 | Mlig455_065357 {REF} {Length: 1981} {Pfam: Survival motor neuron protein (SMN) [PF06003.14, score=39.2]} {Human: ENSG00000119953, SMNDC1, survival motor neuron domain containing 1, [RH, Score=123, Expect=1e-33]} {Mouse: ENSMUSG00000025024, Smndc1, survival motor neuron domain containing 1, [RH, Score=123, Expect=9e-34]} {Dmel: FBgn0039977, CG17454, [RH, Score=110, Expect=7e-29]} {Celegans: WBGene00004891, smr-1, SMN (Survival of Motor Neuron protein) Related, [RH, Score=59.7, Expect=2e-10]} {Smed: dd_Smed_v6_5356_0_1, dd_Smed_v6_5356_0_1, [RH, Score=79.0, Expect=5e-18]} {RNA1509_22547, RNA1509_54494} {RNA1310_19986, RNA1509_22547, RNA1509_54494} {RNA1509_22547, RNA1509_54494, RNA815_8484.1} |
| 4. | MligTC455_38515 | 397 | 8.27 | Mlig455_045464 | Neo: Neoblast, stringent Age: logFC(26M/2M)=0.290 Region-enriched R5: 1.652/0.00266 |
CAD | 2.477 | - | - | 0.747 | 0.954 | - | 0.776 | Mlig455_045464 {REF} {Length: 8528} {TRANSSPLICED} {Pfam: Carbamoyl-phosphate synthase L chain, ATP binding domain [PF02786.19, score=365.9]; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain [PF02729.23, score=150.0]; Glutamine amidotransferase class-I [PF00117.30, score=140.3]; Carbamoyl-phosphate synthase small chain, CPSase domain [PF00988.24, score=136.6]; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain [PF00185.26, score=97.9]; Carbamoyl-phosphate synthetase large chain, oligomerisation domain [PF02787.21, score=91.5]; ATP-grasp domain [PF02222.24, score=57.9]; MGS-like domain [PF02142.24, score=56.7]; D-ala D-ala ligase C-terminus [PF07478.15, score=55.9]; Amidohydrolase family [PF01979.22, score=50.2]; ATP-grasp in the biosynthetic pathway with Ter operon [PF15632.8, score=43.7]; ATP-grasp domain [PF02655.16, score=24.5]; Peptidase C26 [PF07722.15, score=24.2]; DJ-1/PfpI family [PF01965.26, score=23.3]; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain [PF01071.21, score=21.2]} {Human: ENSG00000084774, CAD, carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, [RH, Score=2667, Expect=0.0]} {Mouse: ENSMUSG00000013629, Cad, carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, [RH, Score=2318, Expect=0.0]} {Dmel: FBgn0003189, r, rudimentary, [RH, Score=2589, Expect=0.0]} {Celegans: WBGene00004259, pyr-1, CAD protein Glutamine-dependent carbamoyl-phosphate synthase Aspartate carbamoyltransferase Dihydroorotase, [RH, Score=2159, Expect=0.0]} {Smed: dd_Smed_v6_7167_0_1, dd_Smed_v6_7167_0_1, [RH, Score=2290, Expect=0.0]} {RNA1509_1847, RNA1509_40342} {RNA1310_314.1, RNA1509_1847, RNA1509_40342} {RNA1509_1847, RNA1509_40342, RNA815_114} |
| 5. | MligTC455_49984 | 502 | 10.45 | Mlig455_058735 | Neo: - Age: - |
DYNC1LI1 | 0.973 | - | - | - | - | - | 0.973 | Mlig455_058735 {REF} {Length: 3066} {Pfam: Dynein light intermediate chain (DLIC) [PF05783.13, score=391.2]} {Human: ENSG00000144635, DYNC1LI1, dynein cytoplasmic 1 light intermediate chain 1, [RH, Score=300, Expect=3e-95]; ENSG00000135720, DYNC1LI2, dynein cytoplasmic 1 light intermediate chain 2, [RH, Score=289, Expect=4e-91]} {Mouse: ENSMUSG00000032435, Dync1li1, dynein cytoplasmic 1 light intermediate chain 1, [RH, Score=300, Expect=2e-95]; ENSMUSG00000035770, Dync1li2, dynein, cytoplasmic 1 light intermediate chain 2, [RH, Score=298, Expect=5e-95]} {Dmel: FBgn0030276, Dlic, Dynein light intermediate chain, [RH, Score=296, Expect=4e-94]} {Celegans: WBGene00001007, dli-1, Dynein Light Intermediate chain, [RH, Score=139, Expect=1e-35]} {Smed: dd_Smed_v6_8444_0_1, dd_Smed_v6_8444_0_1, [RH, Score=315, Expect=3e-98]} {RNA1509_6530} {RNA1310_2016} {RNA815_15385.1} |
| 6. | MligTC455_16378 | 713 | 14.86 | Mlig455_038591 | Neo: - Age: - Region-enriched R5: 2.307/0.00005 Regeneration-upregulated TP: 4.678 Regeneration-enriched TP: 4.678 |
MCAT | 0.971 | - | - | - | - | - | 0.971 | Mlig455_038591 {REF} {Length: 1381} {TRANSSPLICED} {Pfam: Acyl transferase domain [PF00698.23, score=80.3]} {Human: ENSG00000100294, MCAT, malonyl-CoA-acyl carrier protein transacylase, [RH, Score=273, Expect=4e-88]} {Mouse: ENSMUSG00000048755, Mcat, malonyl CoA:ACP acyltransferase (mitochondrial), [RH, Score=268, Expect=1e-86]} {Dmel: FBgn0036691, beg, bad egg, [RH, Score=273, Expect=1e-88]} {Celegans: WBGene00016812, C50D2.9, [RH, Score=215, Expect=3e-66]} {Smed: dd_Smed_v6_10612_0_2, dd_Smed_v6_10612_0_2, [RH, Score=256, Expect=2e-82]} {RNA1509_14588, RNA1509_24521, RNA1509_27650} {RNA1310_12229, RNA1509_14588, RNA1509_24521, RNA1509_27650} {RNA1509_14588, RNA1509_24521, RNA1509_27650, RNA815_4030} |
| 7. | MligTC455_15667 | 441 | 9.18 | Mlig455_059393 | Neo: Irradiation Age: - |
FICD | 0.962 | - | - | - | - | - | 0.962 | Mlig455_059393 {REF} {Length: 3812} {Pfam: Evolutionarily conserved signalling intermediate in Toll pathway [PF06239.13, score=180.7]; Fic/DOC family [PF02661.20, score=83.3]; C-terminal domain of the ECSIT protein [PF14784.8, score=42.0]; Tetratricopeptide repeat [PF07719.19, score=21.7]; Tetratricopeptide repeat [PF13432.8, score=20.3]; Tetratricopeptide repeat [PF13428.8, score=20.0]} {Human: ENSG00000198855, FICD, FIC domain containing, [RH, Score=351, Expect=6e-110]} {Mouse: ENSMUSG00000053334, Ficd, FIC domain containing, [RH, Score=341, Expect=2e-106]} {Dmel: FBgn0263278, Fic, Fic domain-containing protein, [RH, Score=333, Expect=6e-103]} {Celegans: WBGene00014004, fic-1, Adenosine monophosphate-protein transferase FICD homolog, [RH, Score=304, Expect=3e-92]} {Smed: dd_Smed_v6_7501_0_1, dd_Smed_v6_7501_0_1, [RH, Score=416, Expect=3e-135]} {RNA1509_26908} {RNA1310_16000} {RNA815_13748} |
| 8. | MligTC455_22023 | 338 | 7.03 | Mlig455_046682 | Neo: - Age: - |
BMI1 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_046682 {REF} {Length: 3035} {TRANSSPLICED} {Pfam: RAWUL domain RING finger- and WD40-associated ubiquitin-like [PF16207.7, score=40.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=35.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=32.9]; Ring finger domain [PF13639.8, score=24.3]; RING-type zinc-finger [PF13445.8, score=22.5]; zinc-RING finger domain [PF14634.8, score=21.8]; Autophagy protein Atg8 ubiquitin like [PF02991.18, score=19.0]} {Human: ENSG00000168283, BMI1, BMI1 proto-oncogene, polycomb ring finger, [RH, Score=226, Expect=5e-72]; ENSG00000269897, COMMD3-BMI1, COMMD3-BMI1 readthrough, [RH, Score=226, Expect=2e-70]} {Mouse: ENSMUSG00000026739, Bmi1, Bmi1 polycomb ring finger oncogene, [RH, Score=221, Expect=2e-70]} {Dmel: FBgn0005624, Psc, Posterior sex combs, [RH, Score=165, Expect=1e-45]} {Celegans: WBGene00008684, mig-32, [Score=91.3, Expect=2e-20]} {Smed: dd_Smed_v6_12753_0_1, dd_Smed_v6_12753_0_1, [RH, Score=168, Expect=1e-50]} {RNA1509_51655} {RNA1310_33482.1, RNA1509_51655} {RNA1509_51655, RNA815_18976} |
| 9. | MligTC455_39927 | 462 | 9.62 | Mlig455_003440, Mlig455_030666 | Neo: - Age: - Region-enriched R5: 1.172/0.01173 |
0.96 | - | - | - | - | - | 0.960 | Mlig455_003440 {REF} {Length: 3294} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=22.7]} {RNA1509_51800} {RNA1310_33993} {RNA815_19951} Mlig455_030666 {REF} {Length: 3777} {Pfam: Mitochondrial carrier protein [PF00153.29, score=22.1]} {RNA1509_51800} {RNA1310_33993, RNA1509_51800} {RNA1509_51800, RNA815_19951} |
|
| 10. | MligTC455_41687 | 1319 | 27.47 | Mlig455_065436, Mlig455_067200 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.268 Region-specific R5: 1.722 Region-enriched R5: 1.741/0.00000 |
CRCP | 0.954 | - | - | - | - | - | 0.954 | Mlig455_065436 {REF} {Length: 524} {TRANSSPLICED} {Pfam: RNA polymerase Rpb4 [PF03874.18, score=73.8]} {Human: ENSG00000241258, CRCP, CGRP receptor component, [RH, Score=61.2, Expect=3e-12]} {Mouse: ENSMUSG00000025532, Crcp, calcitonin gene-related peptide-receptor component protein, [RH, Score=58.9, Expect=1e-11]} {RNA1509_24920} {RNA1310_66593} {RNA815_24495} Mlig455_067200 {REF} {Length: 524} {TRANSSPLICED} {Pfam: RNA polymerase Rpb4 [PF03874.18, score=73.8]} {Human: ENSG00000241258, CRCP, CGRP receptor component, [RH, Score=61.2, Expect=3e-12]} {Mouse: ENSMUSG00000025532, Crcp, calcitonin gene-related peptide-receptor component protein, [RH, Score=58.9, Expect=1e-11]} {RNA1509_24920, RNA1509_35655, RNA1509_40192} {RNA1310_66593, RNA1509_24920, RNA1509_35655, RNA1509_40192} {RNA1509_24920, RNA1509_35655, RNA1509_40192, RNA815_24495} |
| 11. | MligTC455_17123 | 461 | 9.61 | Mlig455_054652, Mlig455_057638 | Neo: Irradiation Age: Down-Up-Down Region-enriched R5: 1.704/0.04246 |
NFYC | 0.951 | - | - | - | - | - | 0.951 | Mlig455_054652 {REF} {Length: 1711} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=53.5]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=39.8]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [Score=125, Expect=3e-33]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [Score=125, Expect=2e-33]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [Score=122, Expect=3e-31]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=105, Expect=6e-27]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=159, Expect=2e-46]} {RNA1509_28888} {RNA1310_21090.1} {RNA815_29133} Mlig455_057638 {REF} {Length: 3378} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=53.5]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=40.0]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [Score=125, Expect=2e-32]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [Score=124, Expect=4e-33]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [Score=122, Expect=6e-31]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=104, Expect=1e-26]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=158, Expect=4e-46]} {RNA1509_28888} {RNA1310_21090.1} {RNA815_29133} |
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