Data search
Results for MligTC455_46384
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_46384 | 291 | 6.06 | Mlig455_007494 | Neo: - Age: - |
GTF2H1 | Mlig455_007494 {REF} {Length: 2990} {TRANSSPLICED} {Pfam: BSD domain [PF03909.19, score=86.2]; TFIIH p62 subunit, N-terminal domain [PF08567.13, score=52.8]} {Human: ENSG00000110768, GTF2H1, general transcription factor IIH subunit 1, [RH, Score=314, Expect=3e-99]} {Mouse: ENSMUSG00000006599, Gtf2h1, general transcription factor II H, polypeptide 1, [RH, Score=321, Expect=3e-102]} {Dmel: FBgn0033929, Tfb1, Transcription factor B1, [RH, Score=357, Expect=9e-116]} {Celegans: WBGene00019821, R02D3.3, [RH, Score=159, Expect=5e-42]} {Smed: dd_Smed_v6_10064_0_1, dd_Smed_v6_10064_0_1, [RH, Score=245, Expect=3e-73]} {RNA1509_21043, RNA1509_54813} {RNA1310_9455, RNA1509_21043, RNA1509_54813} {RNA1509_21043, RNA1509_54813, RNA815_5553} |
Cumulative graph for MligTC455_46384
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.796 | 3.128 | 0.64650 | 1.00000 | |
| RegionR2 | -0.692 | 3.128 | 0.32903 | 0.72130 | |
| RegionR3 | -1.06 | 3.128 | 0.07520 | 0.48621 | |
| RegionR4 | 1.201 | 3.128 | 0.09007 | 0.28671 | |
| RegionR5 | 0.611 | 3.128 | 0.20799 | 0.50268 | |
| RegionR6 | -0.19 | 3.128 | 0.73266 | 1.00000 | |
| RegionR7 | -0.188 | 3.128 | 0.78854 | 1.00000 | |
| RegionR8 | -0.478 | 3.128 | 0.58653 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.063 | 3.128 | 0.24316 | 0.96633 | |
| RegenerationR2 | -0.512 | 3.128 | 0.38597 | 0.80557 | |
| RegenerationR3 | 0.125 | 3.128 | 0.85950 | 1.00000 | |
| RegenerationR4 | -0.413 | 3.128 | 0.52964 | 0.88409 | |
| RegenerationR5 | -0.457 | 3.128 | 0.43158 | 0.81902 | |
| RegenerationR6 | -0.331 | 3.128 | 0.61941 | 0.88053 | |
| RegenerationBL | 0.014 | 3.128 | 0.98603 | 1.00000 | |
| RegenerationTP | -0.534 | 3.128 | 0.53465 | 0.92342 |
Genes with expression patterns similar to MligTC455_46384
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_46384 | 291 | 6.06 | Mlig455_007494 | Neo: - Age: - |
GTF2H1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_007494 {REF} {Length: 2990} {TRANSSPLICED} {Pfam: BSD domain [PF03909.19, score=86.2]; TFIIH p62 subunit, N-terminal domain [PF08567.13, score=52.8]} {Human: ENSG00000110768, GTF2H1, general transcription factor IIH subunit 1, [RH, Score=314, Expect=3e-99]} {Mouse: ENSMUSG00000006599, Gtf2h1, general transcription factor II H, polypeptide 1, [RH, Score=321, Expect=3e-102]} {Dmel: FBgn0033929, Tfb1, Transcription factor B1, [RH, Score=357, Expect=9e-116]} {Celegans: WBGene00019821, R02D3.3, [RH, Score=159, Expect=5e-42]} {Smed: dd_Smed_v6_10064_0_1, dd_Smed_v6_10064_0_1, [RH, Score=245, Expect=3e-73]} {RNA1509_21043, RNA1509_54813} {RNA1310_9455, RNA1509_21043, RNA1509_54813} {RNA1509_21043, RNA1509_54813, RNA815_5553} |
| 2. | MligTC455_51404 | 1678 | 34.95 | Mlig455_004713 | Neo: - Age: - |
PRPF6 | 2.537 | - | - | - | 0.755 | 0.825 | 0.957 | Mlig455_004713 {REF} {Length: 2968} {TRANSSPLICED} {Pfam: PRP1 splicing factor, N-terminal [PF06424.14, score=183.9]; Tetratricopeptide repeat [PF13428.8, score=111.3]; Tetratricopeptide repeat [PF14559.8, score=59.4]; Tetratricopeptide repeat [PF07719.19, score=57.1]; Tetratricopeptide repeat [PF13181.8, score=45.6]; Tetratricopeptide repeat [PF13432.8, score=44.8]; Tetratricopeptide repeat [PF13431.8, score=37.1]; FAT domain [PF02259.25, score=34.3]; Tetratricopeptide repeat [PF00515.30, score=25.0]; TPR repeat [PF13414.8, score=22.4]; Suppressor of forked protein (Suf) [PF05843.16, score=18.9]} {Human: ENSG00000101161, PRPF6, pre-mRNA processing factor 6, [RH, Score=1219, Expect=0.0]} {Mouse: ENSMUSG00000002455, Prpf6, pre-mRNA splicing factor 6, [RH, Score=1225, Expect=0.0]} {Dmel: FBgn0036828, CG6841, [RH, Score=1189, Expect=0.0]} {Celegans: WBGene00013343, prp-6, Yeast PRP (Splicing factor) related, [RH, Score=1031, Expect=0.0]} {Smed: dd_Smed_v6_1153_0_1, dd_Smed_v6_1153_0_1, [RH, Score=979, Expect=0.0]} {RNA1509_2962} {RNA1310_1406.1} {RNA815_394.1} |
| 3. | MligTC455_35998 | 1012 | 21.09 | Mlig455_017147 | Neo: - Age: - Regeneration-upregulated BL: 1.812 Regeneration-enriched BL: 1.812 |
DOT1L | 1.844 | - | - | 0.890 | - | - | 0.954 | Mlig455_017147 {REF} {Length: 2954} {Pfam: Histone methylation protein DOT1 [PF08123.15, score=243.1]} {Human: ENSG00000104885, DOT1L, DOT1 like histone lysine methyltransferase, [RH, Score=371, Expect=1e-112]} {Mouse: ENSMUSG00000061589, Dot1l, DOT1-like, histone H3 methyltransferase (S. cerevisiae), [RH, Score=352, Expect=6e-106]} {Dmel: FBgn0264495, gpp, grappa, [RH, Score=342, Expect=5e-102]} {Celegans: WBGene00021474, dot-1.1, DOT1 histone methyltransferase family, [RH, Score=162, Expect=2e-41]} {Smed: dd_Smed_v6_4515_0_3, dd_Smed_v6_4515_0_3, [RH, Score=361, Expect=4e-115]} {RNA1509_3518} {RNA1310_219} {RNA815_1960} |
| 4. | MligTC455_38240 | 333 | 6.94 | Mlig455_023639 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.360 |
XRCC5 | 1.709 | 0.754 | - | - | - | - | 0.955 | Mlig455_023639 {REF} {Length: 3137} {TRANSSPLICED} {Pfam: Ku70/Ku80 beta-barrel domain [PF02735.18, score=128.0]; Ku C terminal domain like [PF08785.13, score=59.2]; Ku70/Ku80 N-terminal alpha/beta domain [PF03731.17, score=35.1]} {Human: ENSG00000079246, XRCC5, X-ray repair cross complementing 5, [RH, Score=258, Expect=7e-75]} {Mouse: ENSMUSG00000026187, Xrcc5, X-ray repair complementing defective repair in Chinese hamster cells 5, [RH, Score=253, Expect=2e-73]} {Smed: dd_Smed_v6_8421_0_1, dd_Smed_v6_8421_0_1, [RH, Score=310, Expect=2e-95]} {RNA1509_41784, RNA1509_8513} {RNA1310_6057.1, RNA1509_41784, RNA1509_8513} {RNA1509_41784, RNA1509_8513, RNA815_2239} |
| 5. | MligTC455_29334 | 663 | 13.82 | Mlig455_017157 | Neo: - Age: - |
DOCK9 | 0.966 | - | - | - | 0.966 | - | - | Mlig455_017157 {REF} {Length: 8639} {Pfam: Dock homology region 2 [PF06920.15, score=402.2]; C2 domain in Dock180 and Zizimin proteins [PF14429.8, score=119.8]; Domain of unknown function (DUF3398) [PF11878.10, score=29.4]} {Human: ENSG00000088387, DOCK9, dedicator of cytokinesis 9, [RH, Score=390, Expect=4e-111]} {Mouse: ENSMUSG00000025558, Dock9, dedicator of cytokinesis 9, [Score=761, Expect=0.0]} {Dmel: FBgn0260486, Ziz, Zizimin, [RH, Score=364, Expect=4e-101]} {Celegans: WBGene00018520, F46H5.4, [Score=221, Expect=2e-57]} {Smed: dd_Smed_v6_2660_0_5, dd_Smed_v6_2660_0_5, [RH, Score=297, Expect=8e-81]} {RNA1509_4678} {RNA1310_527.1, RNA1509_4678} {RNA1509_4678, RNA815_3082} |
| 6. | MligTC455_44654 | 662 | 13.79 | Mlig455_044174 | Neo: - Age: - |
0.962 | - | - | - | - | - | 0.962 | Mlig455_044174 {REF} {Length: 3414} {TRANSSPLICED} {Celegans: WBGene00020320, T07F8.4, [Score=48.9, Expect=3e-06]} {RNA1509_28675} {RNA1310_25238.1} {RNA815_17165} | |
| 7. | MligTC455_16855 | 131 | 2.72 | Mlig455_045460 | Neo: Int S/G2/M Age: Up-Down-Down |
CTDP1 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_045460 {REF} {Length: 6244} {Pfam: NLI interacting factor-like phosphatase [PF03031.20, score=83.4]; Biotin-lipoyl like [PF13533.8, score=24.8]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=22.8]} {Human: ENSG00000060069, CTDP1, CTD phosphatase subunit 1, [RH, Score=265, Expect=6e-76]; ENSG00000282752, CTDP1, CTD phosphatase subunit 1, [RH, Score=263, Expect=8e-76]} {Mouse: ENSMUSG00000033323, Ctdp1, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1, [RH, Score=266, Expect=4e-76]} {Dmel: FBgn0035026, Fcp1, TFIIF-interacting CTD phosphatase, [RH, Score=300, Expect=7e-89]} {Celegans: WBGene00009479, fcp-1, FCP1 (Yeast TFIIF-interacting CTD phosphatase subunit) homolog, [RH, Score=281, Expect=2e-84]} {Smed: dd_Smed_v6_11212_1_1, dd_Smed_v6_11212_1_1, [RH, Score=263, Expect=8e-77]} {RNA1509_8613} {RNA1310_8460} {RNA815_689.1} |
| 8. | MligTC455_20902 | 110 | 2.3 | Mlig455_011710 | Neo: - Age: logFC(26M/2M)=0.245 |
SLC4A10 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_011710 {REF} {Length: 4288} {TRANSSPLICED} {Pfam: HCO3- transporter family [PF00955.23, score=710.7]; Band 3 cytoplasmic domain [PF07565.15, score=281.4]} {Human: ENSG00000144290, SLC4A10, solute carrier family 4 member 10, [RH, Score=951, Expect=0.0]} {Mouse: ENSMUSG00000021733, Slc4a7, solute carrier family 4, sodium bicarbonate cotransporter, member 7, [RH, Score=944, Expect=0.0]} {Dmel: FBgn0259111, Ndae1, Na[+]-driven anion exchanger 1, [Score=647, Expect=0.0]} {Celegans: WBGene00009920, abts-1, Anion exchange protein, [Score=601, Expect=0.0]} {Smed: dd_Smed_v6_3003_0_2, dd_Smed_v6_3003_0_2, [RH, Score=1197, Expect=0.0]} {RNA1509_5194} {RNA1310_6943} {RNA815_5130} |
| 9. | MligTC455_48077 | 394 | 8.22 | Mlig455_046715 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.163/0.02521 |
0.957 | - | 0.957 | - | - | - | - | Mlig455_046715 {REF} {Length: 2154} {TRANSSPLICED} {RNA1509_16364} {RNA1310_13050.1} {RNA815_7204} | |
| 10. | MligTC455_29336 | 634 | 13.2 | Mlig455_048109 | Neo: - Age: Up-Down-Up |
DOCK9 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_048109 {REF} {Length: 4298} {Pfam: Dock homology region 2 [PF06920.15, score=365.8]} {Human: ENSG00000088387, DOCK9, dedicator of cytokinesis 9, [Score=362, Expect=3e-106]; ENSG00000147251, DOCK11, dedicator of cytokinesis 11, [Score=355, Expect=5e-104]} {Mouse: ENSMUSG00000025558, Dock9, dedicator of cytokinesis 9, [Score=365, Expect=2e-107]; ENSMUSG00000031093, Dock11, dedicator of cytokinesis 11, [Score=355, Expect=5e-104]} {Dmel: FBgn0260486, Ziz, Zizimin, [Score=332, Expect=2e-96]} {Celegans: WBGene00018520, F46H5.4, [Score=200, Expect=2e-52]} {Smed: dd_Smed_v6_2660_0_8, dd_Smed_v6_2660_0_8, [Score=272, Expect=2e-76]} {RNA1509_10943} {RNA1310_1197.2} {RNA815_16972} |
| 11. | MligTC455_53492 | 4379 | 91.23 | Mlig455_019974 | Neo: - Age: - Regeneration-upregulated BL: 1.552 Regeneration-enriched BL: 1.552 |
JUP | 0.954 | - | - | - | - | - | 0.954 | Mlig455_019974 {REF} {Length: 3954} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=81.6]; Domain of unknown function (DUF3361) [PF11841.10, score=25.6]; Adaptin N terminal region [PF01602.22, score=20.7]; Spinocerebellar ataxia type 10 protein domain [PF09759.11, score=20.1]} {Human: ENSG00000173801, JUP, junction plakoglobin, [RH, Score=446, Expect=1e-144]} {Mouse: ENSMUSG00000001552, Jup, junction plakoglobin, [RH, Score=442, Expect=1e-143]} {Dmel: FBgn0000117, arm, armadillo, [Score=456, Expect=2e-149]} {Celegans: WBGene00001979, hmp-2, Beta-catenin-like protein hmp-2, [RH, Score=225, Expect=4e-63]} {Smed: dd_Smed_v6_2688_0_1, dd_Smed_v6_2688_0_1, [RH, Score=407, Expect=3e-128]} {RNA1509_17882, RNA1509_29435, RNA1509_30595, RNA1509_3591, RNA1509_6062, RNA1509_7628} {RNA1310_2400.1, RNA1509_17882, RNA1509_29435, RNA1509_30595, RNA1509_3591, RNA1509_6062, RNA1509_7628} {RNA1509_17882, RNA1509_29435, RNA1509_30595, RNA1509_3591, RNA1509_6062, RNA1509_7628, RNA815_2793} |
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