M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_46499

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_46499 3275 68.23 Mlig455_000184, Mlig455_058441

Neo: -

Age: -

 TXNL4A

Mlig455_000184 {REF} {Length: 707} {TRANSSPLICED} {Pfam: Mitosis protein DIM1 [PF02966.18, score=221.0]; Thioredoxin [PF00085.22, score=24.5]} {Human: ENSG00000141759, TXNL4A, thioredoxin like 4A, [RH, Score=267, Expect=2e-93]} {Mouse: ENSMUSG00000057130, Txnl4a, thioredoxin-like 4A, [RH, Score=267, Expect=1e-93]} {Dmel: FBgn0031601, Dim1, [RH, Score=267, Expect=1e-93]} {Celegans: WBGene00235102, Y54G2A.75, [RH, Score=265, Expect=6e-93]} {Smed: dd_Smed_v6_5223_0_1, dd_Smed_v6_5223_0_1, [RH, Score=271, Expect=2e-95]} {RNA1509_28744} {RNA1310_59342} {RNA815_30323}

Mlig455_058441 {REF} {Length: 707} {TRANSSPLICED} {Pfam: Mitosis protein DIM1 [PF02966.18, score=221.0]; Thioredoxin [PF00085.22, score=24.5]} {Human: ENSG00000141759, TXNL4A, thioredoxin like 4A, [RH, Score=267, Expect=2e-93]} {Mouse: ENSMUSG00000057130, Txnl4a, thioredoxin-like 4A, [RH, Score=267, Expect=1e-93]} {Dmel: FBgn0031601, Dim1, [RH, Score=267, Expect=1e-93]} {Celegans: WBGene00235102, Y54G2A.75, [RH, Score=265, Expect=6e-93]} {Smed: dd_Smed_v6_5223_0_1, dd_Smed_v6_5223_0_1, [RH, Score=271, Expect=2e-95]} {RNA1509_19742, RNA1509_28744, RNA1509_38992, RNA1509_8847} {RNA1310_59342, RNA1509_19742, RNA1509_28744, RNA1509_38992, RNA1509_8847} {RNA1509_19742, RNA1509_28744, RNA1509_38992, RNA1509_8847, RNA815_30323}

Cumulative graph for MligTC455_46499

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.87 6.278 0.16496 0.78875
RegionR2 -0.517 6.278 0.14887 0.48182
RegionR3 -0.091 6.278 0.76112 1.00000
RegionR4 0.719 6.278 0.02941 0.13397
RegionR5 0.968 6.278 0.00033 0.00428
RegionR6 0.277 6.278 0.34646 0.93200
RegionR7 -0.181 6.278 0.57428 1.00000
RegionR8 -0.305 6.278 0.40803 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -8.744 6.278 0.00236 0.25373
RegenerationR2 0.048 6.278 0.89280 1.00000
RegenerationR3 -0.098 6.278 0.79132 0.97933
RegenerationR4 -0.026 6.278 0.94435 1.00000
RegenerationR5 -0.516 6.278 0.14331 0.55793
RegenerationR6 -0.427 6.278 0.24867 0.59702
RegenerationBL 0.061 6.278 0.86124 1.00000
RegenerationTP 0.575 6.278 0.11941 0.52818


Genes with expression patterns similar to MligTC455_46499

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_46499 3275 68.23 Mlig455_000184, Mlig455_058441

Neo: -

Age: -

 TXNL4A 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_000184 {REF} {Length: 707} {TRANSSPLICED} {Pfam: Mitosis protein DIM1 [PF02966.18, score=221.0]; Thioredoxin [PF00085.22, score=24.5]} {Human: ENSG00000141759, TXNL4A, thioredoxin like 4A, [RH, Score=267, Expect=2e-93]} {Mouse: ENSMUSG00000057130, Txnl4a, thioredoxin-like 4A, [RH, Score=267, Expect=1e-93]} {Dmel: FBgn0031601, Dim1, [RH, Score=267, Expect=1e-93]} {Celegans: WBGene00235102, Y54G2A.75, [RH, Score=265, Expect=6e-93]} {Smed: dd_Smed_v6_5223_0_1, dd_Smed_v6_5223_0_1, [RH, Score=271, Expect=2e-95]} {RNA1509_28744} {RNA1310_59342} {RNA815_30323}

Mlig455_058441 {REF} {Length: 707} {TRANSSPLICED} {Pfam: Mitosis protein DIM1 [PF02966.18, score=221.0]; Thioredoxin [PF00085.22, score=24.5]} {Human: ENSG00000141759, TXNL4A, thioredoxin like 4A, [RH, Score=267, Expect=2e-93]} {Mouse: ENSMUSG00000057130, Txnl4a, thioredoxin-like 4A, [RH, Score=267, Expect=1e-93]} {Dmel: FBgn0031601, Dim1, [RH, Score=267, Expect=1e-93]} {Celegans: WBGene00235102, Y54G2A.75, [RH, Score=265, Expect=6e-93]} {Smed: dd_Smed_v6_5223_0_1, dd_Smed_v6_5223_0_1, [RH, Score=271, Expect=2e-95]} {RNA1509_19742, RNA1509_28744, RNA1509_38992, RNA1509_8847} {RNA1310_59342, RNA1509_19742, RNA1509_28744, RNA1509_38992, RNA1509_8847} {RNA1509_19742, RNA1509_28744, RNA1509_38992, RNA1509_8847, RNA815_30323}
2. MligTC455_46500 1415 29.48 Mlig455_067708

Neo: -

Age: Down-Up-Up

 TXNL4A 5.84 0.990 0.994 0.966 0.992 0.960 0.938 Mlig455_067708 {REF} {Length: 606} {TRANSSPLICED} {Pfam: Mitosis protein DIM1 [PF02966.18, score=56.7]} {Human: ENSG00000141759, TXNL4A, thioredoxin like 4A, [Score=90.5, Expect=1e-24]} {Mouse: ENSMUSG00000057130, Txnl4a, thioredoxin-like 4A, [Score=90.5, Expect=2e-24]} {Dmel: FBgn0031601, Dim1, [Score=89.7, Expect=3e-24]} {Celegans: WBGene00235102, Y54G2A.75, [Score=91.3, Expect=6e-25]} {Smed: dd_Smed_v6_5223_0_1, dd_Smed_v6_5223_0_1, [Score=98.2, Expect=1e-27]} {RNA1509_28744} {RNA1310_59342} {RNA815_30323}
3. MligTC455_47744 3571 74.4 Mlig455_009832, Mlig455_010352

Neo: -

Age: -

 MAP2K6 3.156 - 0.723 0.757 0.711 - 0.965

Mlig455_009832 {REF} {Length: 1615} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=179.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=111.9]; Kinase-like [PF14531.8, score=25.8]; ABC1 atypical kinase-like domain [PF03109.18, score=18.0]} {Human: ENSG00000108984, MAP2K6, mitogen-activated protein kinase kinase 6, [Score=243, Expect=4e-78]; ENSG00000034152, MAP2K3, mitogen-activated protein kinase kinase 3, [Score=235, Expect=6e-75]} {Mouse: ENSMUSG00000020623, Map2k6, mitogen-activated protein kinase kinase 6, [Score=242, Expect=5e-78]; ENSMUSG00000018932, Map2k3, mitogen-activated protein kinase kinase 3, [Score=233, Expect=1e-74]} {Dmel: FBgn0261524, lic, licorne, [Score=228, Expect=9e-73]} {Celegans: WBGene00004758, sek-1, Dual specificity mitogen-activated protein kinase kinase sek-1, [Score=233, Expect=8e-75]} {Smed: dd_Smed_v6_2106_0_1, dd_Smed_v6_2106_0_1, [Score=224, Expect=2e-71]} {RNA1509_18627, RNA1509_27275} {RNA1310_19035.2, RNA1509_18627, RNA1509_27275} {RNA1509_18627, RNA1509_27275, RNA815_3018.1}

Mlig455_010352 {REF} {Length: 1636} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=178.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=112.6]; Kinase-like [PF14531.8, score=25.8]; ABC1 atypical kinase-like domain [PF03109.18, score=18.0]} {Human: ENSG00000108984, MAP2K6, mitogen-activated protein kinase kinase 6, [Score=241, Expect=1e-77]; ENSG00000034152, MAP2K3, mitogen-activated protein kinase kinase 3, [Score=234, Expect=2e-74]} {Mouse: ENSMUSG00000020623, Map2k6, mitogen-activated protein kinase kinase 6, [Score=241, Expect=2e-77]; ENSMUSG00000018932, Map2k3, mitogen-activated protein kinase kinase 3, [Score=232, Expect=4e-74]} {Dmel: FBgn0261524, lic, licorne, [Score=226, Expect=7e-72]} {Celegans: WBGene00004758, sek-1, Dual specificity mitogen-activated protein kinase kinase sek-1, [Score=232, Expect=3e-74]} {Smed: dd_Smed_v6_2106_0_1, dd_Smed_v6_2106_0_1, [Score=228, Expect=1e-72]} {RNA1509_28594, RNA1509_35327} {RNA1310_19035.1, RNA1509_28594, RNA1509_35327} {RNA1509_28594, RNA1509_35327, RNA815_3018.1}
4. MligTC455_47013 2279 47.48 Mlig455_026791, Mlig455_051804

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.221

 SSSCA1 1.778 - - - 0.817 - 0.961

Mlig455_026791 {REF} {Length: 1046} {TRANSSPLICED} {Pfam: Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) [PF06677.14, score=56.3]} {Human: ENSG00000173465, SSSCA1, Sjogren syndrome/scleroderma autoantigen 1, [RH, Score=113, Expect=4e-31]} {Mouse: ENSMUSG00000079478, Sssca1, Sjogren syndrome/scleroderma autoantigen 1, [RH, Score=112, Expect=1e-30]} {Celegans: WBGene00012643, Y39A1A.3, [RH, Score=50.1, Expect=1e-07]} {Smed: dd_Smed_v6_2060_0_1, dd_Smed_v6_2060_0_1, [RH, Score=82.8, Expect=3e-20]} {RNA1509_29657, RNA1509_39476} {RNA1310_30546, RNA1509_29657, RNA1509_39476} {RNA1509_29657, RNA1509_39476, RNA815_15417}

Mlig455_051804 {REF} {Length: 1044} {TRANSSPLICED} {Pfam: Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) [PF06677.14, score=56.3]} {Human: ENSG00000173465, SSSCA1, Sjogren syndrome/scleroderma autoantigen 1, [RH, Score=113, Expect=4e-31]} {Mouse: ENSMUSG00000079478, Sssca1, Sjogren syndrome/scleroderma autoantigen 1, [RH, Score=112, Expect=1e-30]} {Celegans: WBGene00012643, Y39A1A.3, [RH, Score=50.1, Expect=1e-07]} {Smed: dd_Smed_v6_2060_0_1, dd_Smed_v6_2060_0_1, [RH, Score=82.8, Expect=3e-20]} {RNA1509_14684, RNA1509_21618} {RNA1310_30546, RNA1509_14684, RNA1509_21618} {RNA1509_14684, RNA1509_21618, RNA815_15417}
5. MligTC455_30041 2719 56.65 Mlig455_004160, Mlig455_004186

Neo: -

Age: logFC(26M/2M)=0.572

Region-enriched R4: 1.550/0.00000

 FAR1 1.718 - - 0.753 - - 0.965

Mlig455_004160 {REF} {Length: 2497} {TRANSSPLICED} {Pfam: Male sterility protein [PF07993.14, score=246.1]; Male sterility protein [PF03015.21, score=96.6]} {Human: ENSG00000197601, FAR1, fatty acyl-CoA reductase 1, [RH, Score=466, Expect=7e-160]} {Mouse: ENSMUSG00000030759, Far1, fatty acyl CoA reductase 1, [RH, Score=467, Expect=1e-160]} {Dmel: FBgn0034145, CG5065, [RH, Score=428, Expect=7e-144]} {Celegans: WBGene00022200, fard-1, Fatty acyl-CoA reductase, [RH, Score=406, Expect=1e-136]} {Smed: dd_Smed_v6_7206_0_1, dd_Smed_v6_7206_0_1, [RH, Score=375, Expect=1e-124]} {RNA1509_13010} {RNA1310_6154} {RNA815_2225}

Mlig455_004186 {REF} {Length: 2492} {TRANSSPLICED} {Pfam: Male sterility protein [PF07993.14, score=243.0]; Male sterility protein [PF03015.21, score=96.5]; NAD dependent epimerase/dehydratase family [PF01370.23, score=18.7]} {Human: ENSG00000197601, FAR1, fatty acyl-CoA reductase 1, [RH, Score=464, Expect=5e-159]} {Mouse: ENSMUSG00000030759, Far1, fatty acyl CoA reductase 1, [RH, Score=466, Expect=6e-160]} {Dmel: FBgn0034145, CG5065, [RH, Score=424, Expect=2e-142]} {Celegans: WBGene00022200, fard-1, Fatty acyl-CoA reductase, [RH, Score=404, Expect=7e-136]} {Smed: dd_Smed_v6_7206_0_1, dd_Smed_v6_7206_0_1, [RH, Score=374, Expect=5e-124]} {RNA1509_13010, RNA1509_2627} {RNA1310_6154, RNA1509_13010, RNA1509_2627} {RNA1509_13010, RNA1509_2627, RNA815_2225}
6. MligTC455_19770 2036 42.41 Mlig455_044236, Mlig455_044255

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.412/0.00042
Region-enriched R4: 1.323/0.00806

 VMA21 1.67 - - 0.706 - 0.964 -

Mlig455_044236 {REF} {Length: 791} {TRANSSPLICED} {Pfam: VMA21-like domain [PF09446.12, score=52.4]} {Human: ENSG00000160131, VMA21, VMA21, vacuolar ATPase assembly factor, [Score=45.4, Expect=1e-06]} {Mouse: ENSMUSG00000073131, Vma21, VMA21 vacuolar H+-ATPase homolog (S. cerevisiae), [Score=43.5, Expect=3e-06]} {Celegans: WBGene00011116, pdcd-2, Vacuolar ATPase assembly integral membrane protein VMA21 homolog, [RH, Score=50.8, Expect=2e-09]} {Smed: dd_Smed_v6_2976_0_1, dd_Smed_v6_2976_0_1, [Score=48.1, Expect=1e-08]} {RNA1509_19501} {RNA1310_35174.1} {RNA815_21706.1}

Mlig455_044255 {REF} {Length: 805} {TRANSSPLICED} {Pfam: VMA21-like domain [PF09446.12, score=52.4]} {Human: ENSG00000160131, VMA21, VMA21, vacuolar ATPase assembly factor, [Score=45.4, Expect=1e-06]} {Mouse: ENSMUSG00000073131, Vma21, VMA21 vacuolar H+-ATPase homolog (S. cerevisiae), [Score=43.5, Expect=3e-06]} {Celegans: WBGene00011116, pdcd-2, Vacuolar ATPase assembly integral membrane protein VMA21 homolog, [RH, Score=50.8, Expect=2e-09]} {Smed: dd_Smed_v6_2976_0_1, dd_Smed_v6_2976_0_1, [Score=48.1, Expect=1e-08]} {RNA1509_19501} {RNA1310_35174.2} {RNA815_21706.1}
7. MligTC455_38302 1233 25.69 Mlig455_046423, Mlig455_046438, Mlig455_046466

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.356/0.00306

 0.983 - - - - - 0.983

Mlig455_046423 {REF} {Length: 509} {TRANSSPLICED} {Pfam: Transcription factor Pcc1 [PF09341.12, score=75.8]} {Smed: dd_Smed_v6_12800_0_1, dd_Smed_v6_12800_0_1, [RH, Score=55.5, Expect=2e-11]} {RNA1509_18789} {RNA1310_68484} {RNA815_35591}

Mlig455_046438 {REF} {Length: 537} {TRANSSPLICED} {Pfam: Transcription factor Pcc1 [PF09341.12, score=75.0]} {Smed: dd_Smed_v6_12800_0_1, dd_Smed_v6_12800_0_1, [RH, Score=55.5, Expect=2e-11]} {RNA1509_18789} {RNA1310_68484} {RNA815_35591}

Mlig455_046466 {REF} {Length: 538} {TRANSSPLICED} {Pfam: Transcription factor Pcc1 [PF09341.12, score=75.0]} {Smed: dd_Smed_v6_12800_0_1, dd_Smed_v6_12800_0_1, [RH, Score=55.5, Expect=2e-11]} {RNA1509_18789, RNA1509_41299} {RNA1310_68484, RNA1509_18789, RNA1509_41299} {RNA1509_18789, RNA1509_41299, RNA815_35591}
8. MligTC455_07549 369 7.68 Mlig455_067105

Neo: -

Age: -

Region-enriched R6: 4.368/0.00006
Region-enriched R7: 4.200/0.00001

 0.98 - - - - 0.980 - Mlig455_067105 {REF} {Length: 1097} {RNA1509_14609} {RNA1310_46631}
9. MligTC455_43497 647 13.47 Mlig455_029738, Mlig455_034882, Mlig455_034894

Neo: -

Age: -

Region-enriched R2: 2.902/0.02617

 RABGGTA 0.958 - - - - 0.958 -

Mlig455_029738 {REF} {Length: 3151} {TRANSSPLICED} {Pfam: Protein prenyltransferase alpha subunit repeat [PF01239.24, score=108.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=25.8]; Leucine rich repeat [PF13855.8, score=23.8]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=20.4]} {Human: ENSG00000100949, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=194, Expect=4e-54]; ENSG00000285193, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=194, Expect=4e-54]} {Mouse: ENSMUSG00000040472, Rabggta, Rab geranylgeranyl transferase, a subunit, [RH, Score=186, Expect=2e-51]} {Dmel: FBgn0037293, CG12007, [RH, Score=156, Expect=6e-41]} {Celegans: WBGene00019778, M57.2, [RH, Score=145, Expect=5e-37]} {Smed: dd_Smed_v6_7183_0_1, dd_Smed_v6_7183_0_1, [RH, Score=188, Expect=2e-52]} {RNA1509_17726, RNA1509_41376, RNA1509_59074} {RNA1310_7973, RNA1509_17726, RNA1509_41376, RNA1509_59074} {RNA1509_17726, RNA1509_41376, RNA1509_59074, RNA815_12806}

Mlig455_034882 {REF} {Length: 2763} {TRANSSPLICED} {Pfam: Protein prenyltransferase alpha subunit repeat [PF01239.24, score=105.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=25.8]; Leucine rich repeat [PF13855.8, score=23.8]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=18.8]} {Human: ENSG00000100949, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=203, Expect=2e-57]; ENSG00000285193, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=203, Expect=2e-57]} {Mouse: ENSMUSG00000040472, Rabggta, Rab geranylgeranyl transferase, a subunit, [RH, Score=197, Expect=3e-55]} {Dmel: FBgn0037293, CG12007, [RH, Score=158, Expect=8e-42]} {Celegans: WBGene00019778, M57.2, [RH, Score=145, Expect=3e-37]} {Smed: dd_Smed_v6_7183_0_1, dd_Smed_v6_7183_0_1, [RH, Score=182, Expect=2e-50]} {RNA1509_17726} {RNA1310_7973} {RNA815_12806}

Mlig455_034894 {REF} {Length: 2483} {TRANSSPLICED} {Pfam: Protein prenyltransferase alpha subunit repeat [PF01239.24, score=107.0]; Protein of unknown function (DUF2722) [PF10846.10, score=19.8]; Copper transport outer membrane protein, MctB [PF11382.10, score=18.9]} {Human: ENSG00000100949, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=170, Expect=1e-47]; ENSG00000285193, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [RH, Score=170, Expect=1e-47]} {Mouse: ENSMUSG00000040472, Rabggta, Rab geranylgeranyl transferase, a subunit, [Score=169, Expect=3e-46]} {Dmel: FBgn0037293, CG12007, [RH, Score=159, Expect=5e-43]} {Celegans: WBGene00019778, M57.2, [RH, Score=149, Expect=4e-39]} {Smed: dd_Smed_v6_7183_0_1, dd_Smed_v6_7183_0_1, [Score=145, Expect=4e-38]} {RNA1509_17726} {RNA1310_6752} {RNA815_12806}
10. MligTC455_20466 767 15.98 Mlig455_056385

Neo: -

Age: -

Region-enriched R4: 2.639/0.00011
Region-enriched R5: 1.936/0.00231

Regeneration-upregulated BL: 1.885

Regeneration-enriched BL: 1.885

 DDAH1 0.957 - - - 0.957 - - Mlig455_056385 {REF} {Length: 2124} {Pfam: N,N dimethylarginine dimethylhydrolase, eukaryotic [PF19420.1, score=33.7]; Arginine deiminase [PF02274.19, score=26.7]} {Human: ENSG00000153904, DDAH1, dimethylarginine dimethylaminohydrolase 1, [RH, Score=148, Expect=1e-42]; ENSG00000206395, DDAH2, dimethylarginine dimethylaminohydrolase 2, [RH, Score=142, Expect=4e-40]; ENSG00000226634, DDAH2, dimethylarginine dimethylaminohydrolase 2, [RH, Score=142, Expect=4e-40]; ENSG00000228128, DDAH2, dimethylarginine dimethylaminohydrolase 2, [RH, Score=142, Expect=4e-40]; ENSG00000213722, DDAH2, dimethylarginine dimethylaminohydrolase 2, [RH, Score=142, Expect=4e-40]; ENSG00000227317, DDAH2, dimethylarginine dimethylaminohydrolase 2, [RH, Score=142, Expect=4e-40]; ENSG00000233076, DDAH2, dimethylarginine dimethylaminohydrolase 2, [RH, Score=142, Expect=4e-40]; ENSG00000225635, DDAH2, dimethylarginine dimethylaminohydrolase 2, [RH, Score=142, Expect=4e-40]} {Mouse: ENSMUSG00000007039, Ddah2, dimethylarginine dimethylaminohydrolase 2, [RH, Score=142, Expect=2e-40]; ENSMUSG00000028194, Ddah1, dimethylarginine dimethylaminohydrolase 1, [RH, Score=139, Expect=2e-39]} {Dmel: FBgn0030467, CG1764, [RH, Score=181, Expect=1e-55]} {Smed: dd_Smed_v6_1460_0_1, dd_Smed_v6_1460_0_1, [RH, Score=306, Expect=3e-105]} {RNA1509_2528} {RNA1310_17359} {RNA815_7449.1}
11. MligTC455_16544 13972 291.08 Mlig455_066559

Neo: -

Age: -

 HMCN1 0.956 - - - - 0.956 - Mlig455_066559 {REF} {Length: 2104} {Pfam: von Willebrand factor type A domain [PF00092.30, score=36.8]; von Willebrand factor type A domain [PF13519.8, score=35.6]; von Willebrand factor type A domain [PF13768.8, score=24.2]; VWA domain containing CoxE-like protein [PF05762.16, score=19.4]} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=85.5, Expect=2e-17]; ENSG00000238203, VWA7, von Willebrand factor A domain containing 7, [Score=84.3, Expect=4e-17]; ENSG00000234433, VWA7, von Willebrand factor A domain containing 7, [Score=84.3, Expect=4e-17]; ENSG00000223757, VWA7, von Willebrand factor A domain containing 7, [Score=84.3, Expect=4e-17]; ENSG00000230048, VWA7, von Willebrand factor A domain containing 7, [Score=84.3, Expect=4e-17]; ENSG00000204396, VWA7, von Willebrand factor A domain containing 7, [Score=84.3, Expect=4e-17]; ENSG00000227144, VWA7, von Willebrand factor A domain containing 7, [Score=84.0, Expect=4e-17]; ENSG00000148357, HMCN2, hemicentin 2, [Score=82.8, Expect=2e-16]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=85.5, Expect=2e-17]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=100, Expect=1e-22]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=78.2, Expect=1e-15]} {RNA1509_6232} {RNA1310_12097.1} {RNA815_2254.1}
12. MligTC455_49246 2098 43.71 Mlig455_059231

Neo: -

Age: -

 SLC25A22 0.956 - - - - - 0.956 Mlig455_059231 {REF} {Length: 1633} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=214.4]} {Human: ENSG00000177542, SLC25A22, solute carrier family 25 member 22, [RH, Score=328, Expect=1e-111]} {Mouse: ENSMUSG00000019082, Slc25a22, solute carrier family 25 (mitochondrial carrier, glutamate), member 22, [RH, Score=328, Expect=7e-112]} {Dmel: FBgn0260743, GC1, Glutamate Carrier 1, [RH, Score=353, Expect=5e-122]} {Celegans: WBGene00008979, F20D1.9, [RH, Score=325, Expect=5e-111]} {Smed: dd_Smed_v6_8518_0_1, dd_Smed_v6_8518_0_1, [RH, Score=368, Expect=2e-128]} {RNA1509_13201} {RNA1310_19593, RNA1509_13201} {RNA1509_13201, RNA815_7974.1}
13. MligTC455_49266 2905 60.51 Mlig455_003098, Mlig455_062792

Neo: Germline

Age: -

Region-enriched R5: 1.022/0.00774

 ARL1 0.955 - - - - - 0.955

Mlig455_003098 {REF} {Length: 1277} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=249.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=56.0]; Ras family [PF00071.24, score=54.1]; G-protein alpha subunit [PF00503.22, score=42.0]; Signal recognition particle receptor beta subunit [PF09439.12, score=41.1]; Gtr1/RagA G protein conserved region [PF04670.14, score=35.0]; 50S ribosome-binding GTPase [PF01926.25, score=25.2]; RsgA GTPase [PF03193.18, score=19.3]} {Human: ENSG00000120805, ARL1, ADP ribosylation factor like GTPase 1, [RH, Score=281, Expect=7e-98]} {Mouse: ENSMUSG00000060904, Arl1, ADP-ribosylation factor-like 1, [RH, Score=283, Expect=2e-98]} {Dmel: FBgn0000115, Arl1, ADP ribosylation factor-like 1, [RH, Score=298, Expect=9e-105]} {Celegans: WBGene00000187, arl-1, ADP-ribosylation factor-like protein 1, [RH, Score=295, Expect=2e-103]} {Smed: dd_Smed_v6_5310_0_1, dd_Smed_v6_5310_0_1, [RH, Score=322, Expect=7e-114]} {RNA1509_12025, RNA1509_50230} {RNA1310_24213, RNA1509_50230} {RNA1509_50230, RNA815_11502}

Mlig455_062792 {REF} {Length: 1280} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=249.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=56.0]; Ras family [PF00071.24, score=54.1]; G-protein alpha subunit [PF00503.22, score=42.0]; Signal recognition particle receptor beta subunit [PF09439.12, score=41.1]; Gtr1/RagA G protein conserved region [PF04670.14, score=35.0]; 50S ribosome-binding GTPase [PF01926.25, score=25.2]; RsgA GTPase [PF03193.18, score=19.3]} {Human: ENSG00000120805, ARL1, ADP ribosylation factor like GTPase 1, [RH, Score=281, Expect=7e-98]} {Mouse: ENSMUSG00000060904, Arl1, ADP-ribosylation factor-like 1, [RH, Score=283, Expect=2e-98]} {Dmel: FBgn0000115, Arl1, ADP ribosylation factor-like 1, [RH, Score=298, Expect=9e-105]} {Celegans: WBGene00000187, arl-1, ADP-ribosylation factor-like protein 1, [RH, Score=295, Expect=2e-103]} {Smed: dd_Smed_v6_5310_0_1, dd_Smed_v6_5310_0_1, [RH, Score=322, Expect=7e-114]} {RNA1509_12025, RNA1509_21690} {RNA1310_24213, RNA1509_12025, RNA1509_21690} {RNA1509_12025, RNA1509_21690, RNA815_11502}
14. MligTC455_16740 1620 33.75 Mlig455_064963

Neo: -

Age: -

 CDK5RAP3 0.95 - - - - - 0.950 Mlig455_064963 {REF} {Length: 1914} {Pfam: CDK5 regulatory subunit-associated protein 3 [PF05600.14, score=163.6]} {Human: ENSG00000108465, CDK5RAP3, CDK5 regulatory subunit associated protein 3, [Score=114, Expect=4e-29]} {Mouse: ENSMUSG00000018669, Cdk5rap3, CDK5 regulatory subunit associated protein 3, [Score=107, Expect=1e-25]} {Dmel: FBgn0050291, CG30291, [Score=99.4, Expect=5e-23]} {Celegans: WBGene00013765, cdkr-3, CDK5RAP3-like protein, [Score=114, Expect=4e-28]} {RNA1509_6110} {RNA1310_14496.1} {RNA815_6590}
15. MligTC455_48248 727 15.14 Mlig455_004203

Neo: -

Age: -

 0.95 - - - 0.950 - - Mlig455_004203 {REF} {Length: 2044} {TRANSSPLICED} {Pfam: HMG-box domain [PF09011.12, score=26.6]; HMG (high mobility group) box [PF00505.21, score=25.3]} {RNA1509_26598, RNA1509_8952} {RNA1310_13126, RNA1509_26598, RNA1509_8952} {RNA1509_26598, RNA1509_8952, RNA815_2407}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA