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Results for MligTC455_46658

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_46658 239 4.97 Mlig455_029096

Neo: -

Age: Up-Down-Down

Region-enriched R5: 1.582/0.02641

 VPS11 Mlig455_029096 {REF} {Length: 2086} {Pfam: Zinc-finger [PF17122.7, score=21.2]; RING-type zinc-finger [PF13445.8, score=20.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=19.8]; Ring finger domain [PF13639.8, score=19.1]} {Human: ENSG00000280616, VPS11, VPS11, CORVET/HOPS core subunit, [Score=87.4, Expect=3e-19]; ENSG00000160695, VPS11, VPS11, CORVET/HOPS core subunit, [Score=87.4, Expect=3e-19]} {Mouse: ENSMUSG00000032127, Vps11, VPS11, CORVET/HOPS core subunit, [Score=87.0, Expect=3e-19]} {Dmel: FBgn0052350, Vps11, Vacuolar protein sorting 11, [Score=46.2, Expect=1e-05]} {Celegans: WBGene00011067, vps-11, Vacuolar protein sorting-associated protein 11 homolog, [Score=59.7, Expect=4e-10]} {Smed: dd_Smed_v6_6678_0_1, dd_Smed_v6_6678_0_1, [Score=64.7, Expect=5e-12]} {RNA1509_41261} {RNA1310_3770.1} {RNA815_1127}

Cumulative graph for MligTC455_46658

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.053 2.843 0.44136 1.00000
RegionR2 0.82 2.843 0.30472 0.69549
RegionR3 1.553 2.843 0.00853 0.13769
RegionR4 0.78 2.843 0.28872 0.59894
RegionR5 1.582 2.843 0.00349 0.02641
RegionR6 0.393 2.843 0.54836 1.00000
RegionR7 0.591 2.843 0.46407 1.00000
RegionR8 -6.772 2.843 0.00343 0.10242

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.982 2.843 0.20943 0.94862
RegenerationR2 -1.028 2.843 0.06090 0.40572
RegenerationR3 -0.618 2.843 0.21739 0.65408
RegenerationR4 -0.385 2.843 0.48332 0.86028
RegenerationR5 -0.254 2.843 0.55948 0.89074
RegenerationR6 0.65 2.843 0.26095 0.61091
RegenerationBL 1.022 2.843 0.51720 0.87962
RegenerationTP 2.725 2.843 0.14361 0.56496


Genes with expression patterns similar to MligTC455_46658

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_46658 239 4.97 Mlig455_029096

Neo: -

Age: Up-Down-Down

Region-enriched R5: 1.582/0.02641

 VPS11 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_029096 {REF} {Length: 2086} {Pfam: Zinc-finger [PF17122.7, score=21.2]; RING-type zinc-finger [PF13445.8, score=20.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=19.8]; Ring finger domain [PF13639.8, score=19.1]} {Human: ENSG00000280616, VPS11, VPS11, CORVET/HOPS core subunit, [Score=87.4, Expect=3e-19]; ENSG00000160695, VPS11, VPS11, CORVET/HOPS core subunit, [Score=87.4, Expect=3e-19]} {Mouse: ENSMUSG00000032127, Vps11, VPS11, CORVET/HOPS core subunit, [Score=87.0, Expect=3e-19]} {Dmel: FBgn0052350, Vps11, Vacuolar protein sorting 11, [Score=46.2, Expect=1e-05]} {Celegans: WBGene00011067, vps-11, Vacuolar protein sorting-associated protein 11 homolog, [Score=59.7, Expect=4e-10]} {Smed: dd_Smed_v6_6678_0_1, dd_Smed_v6_6678_0_1, [Score=64.7, Expect=5e-12]} {RNA1509_41261} {RNA1310_3770.1} {RNA815_1127}
2. MligTC455_46659 223 4.65 Mlig455_029116

Neo: -

Age: Up-Down-Down

Region-enriched R5: 1.707/0.02526

 VPS11 5.794 0.944 0.994 1.000 0.977 0.892 0.987 Mlig455_029116 {REF} {Length: 4870} {TRANSSPLICED} {Pfam: Region in Clathrin and VPS [PF00637.22, score=62.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.9]; Ring finger domain [PF13639.8, score=22.9]; RING-H2 zinc finger domain [PF12678.9, score=20.9]; Zinc-finger [PF17122.7, score=19.9]} {Human: ENSG00000160695, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=634, Expect=0.0]; ENSG00000280616, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=634, Expect=0.0]} {Mouse: ENSMUSG00000032127, Vps11, VPS11, CORVET/HOPS core subunit, [RH, Score=636, Expect=0.0]} {Dmel: FBgn0052350, Vps11, Vacuolar protein sorting 11, [RH, Score=79.7, Expect=1e-14]} {Celegans: WBGene00011067, vps-11, Vacuolar protein sorting-associated protein 11 homolog, [RH, Score=273, Expect=1e-76]} {Smed: dd_Smed_v6_7053_0_1, dd_Smed_v6_7053_0_1, [RH, Score=187, Expect=6e-51]} {RNA1509_11437, RNA1509_41261} {RNA1310_3770.1, RNA1509_41261} {RNA1509_41261, RNA815_1127}
3. MligTC455_20927 128 2.66 Mlig455_052078

Neo: -

Age: -

 0.972 - - - - - 0.972 Mlig455_052078 {REF} {Length: 666} {NoTransDecoderORF} {RNA1310_56856} {RNA815_15280}
4. MligTC455_42928 139 2.9 Mlig455_000600

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.462

 MPV17 0.959 - - - - - 0.959 Mlig455_000600 {REF} {Length: 1874} {TRANSSPLICED} {Pfam: Mpv17 / PMP22 family [PF04117.14, score=65.9]} {Human: ENSG00000115204, MPV17, MPV17, mitochondrial inner membrane protein, [RH, Score=120, Expect=3e-34]} {Mouse: ENSMUSG00000107283, Mpv17, MpV17 mitochondrial inner membrane protein, [RH, Score=123, Expect=2e-35]} {Dmel: FBgn0039930, CG11077, [RH, Score=74.7, Expect=9e-17]} {Celegans: WBGene00011826, T18D3.9, Mpv17-like protein, [RH, Score=83.2, Expect=5e-20]} {Smed: dd_Smed_v6_13953_0_1, dd_Smed_v6_13953_0_1, [RH, Score=127, Expect=5e-37]} {RNA1509_35894, RNA1509_57658} {RNA1310_33755.1, RNA1509_57658} {RNA1509_57658, RNA815_15799}
5. MligTC455_34197 156 3.24 Mlig455_055430

Neo: -

Age: Down-Up-Down

 AVL9 0.955 - - - - - 0.955 Mlig455_055430 {REF} {Length: 4958} {Pfam: Transport protein Avl9 [PF09794.11, score=422.7]; Docking domain of Afi1 for Arf3 in vesicle trafficking [PF07792.14, score=27.1]; DENN domain-containing protein 11 [PF09804.11, score=27.0]} {Human: ENSG00000105778, AVL9, AVL9 cell migration associated, [Score=245, Expect=4e-70]} {Mouse: ENSMUSG00000029787, Avl9, AVL9 cell migration associated, [Score=267, Expect=5e-78]} {Dmel: FBgn0030499, CG11178, [Score=225, Expect=1e-62]} {Celegans: WBGene00020822, T26A5.6, [Score=197, Expect=2e-54]} {Smed: dd_Smed_v6_6271_0_1, dd_Smed_v6_6271_0_1, [Score=207, Expect=2e-56]} {RNA1509_5789} {RNA1310_969.3} {RNA815_4477.1}

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