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Results for MligTC455_46659

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_46659 223 4.65 Mlig455_029116

Neo: -

Age: Up-Down-Down

Region-enriched R5: 1.707/0.02526

 VPS11 Mlig455_029116 {REF} {Length: 4870} {TRANSSPLICED} {Pfam: Region in Clathrin and VPS [PF00637.22, score=62.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.9]; Ring finger domain [PF13639.8, score=22.9]; RING-H2 zinc finger domain [PF12678.9, score=20.9]; Zinc-finger [PF17122.7, score=19.9]} {Human: ENSG00000160695, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=634, Expect=0.0]; ENSG00000280616, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=634, Expect=0.0]} {Mouse: ENSMUSG00000032127, Vps11, VPS11, CORVET/HOPS core subunit, [RH, Score=636, Expect=0.0]} {Dmel: FBgn0052350, Vps11, Vacuolar protein sorting 11, [RH, Score=79.7, Expect=1e-14]} {Celegans: WBGene00011067, vps-11, Vacuolar protein sorting-associated protein 11 homolog, [RH, Score=273, Expect=1e-76]} {Smed: dd_Smed_v6_7053_0_1, dd_Smed_v6_7053_0_1, [RH, Score=187, Expect=6e-51]} {RNA1509_11437, RNA1509_41261} {RNA1310_3770.1, RNA1509_41261} {RNA1509_41261, RNA815_1127}

Cumulative graph for MligTC455_46659

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.301 2.791 0.90386 1.00000
RegionR2 1.2 2.791 0.15605 0.49452
RegionR3 1.848 2.791 0.00277 0.06305
RegionR4 0.827 2.791 0.27667 0.58338
RegionR5 1.707 2.791 0.00328 0.02526
RegionR6 0.67 2.791 0.37520 0.95526
RegionR7 0.57 2.791 0.49556 1.00000
RegionR8 -6.522 2.791 0.00759 0.16168

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.002 2.791 0.37058 1.00000
RegenerationR2 -0.779 2.791 0.15118 0.58525
RegenerationR3 -0.595 2.791 0.25810 0.69243
RegenerationR4 -0.257 2.791 0.65696 0.93641
RegenerationR5 -0.123 2.791 0.79093 0.98583
RegenerationR6 0.662 2.791 0.26868 0.61908
RegenerationBL 1.029 2.791 0.51615 0.87913
RegenerationTP 2.897 2.791 0.11645 0.52212


Genes with expression patterns similar to MligTC455_46659

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_46659 223 4.65 Mlig455_029116

Neo: -

Age: Up-Down-Down

Region-enriched R5: 1.707/0.02526

 VPS11 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_029116 {REF} {Length: 4870} {TRANSSPLICED} {Pfam: Region in Clathrin and VPS [PF00637.22, score=62.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.9]; Ring finger domain [PF13639.8, score=22.9]; RING-H2 zinc finger domain [PF12678.9, score=20.9]; Zinc-finger [PF17122.7, score=19.9]} {Human: ENSG00000160695, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=634, Expect=0.0]; ENSG00000280616, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=634, Expect=0.0]} {Mouse: ENSMUSG00000032127, Vps11, VPS11, CORVET/HOPS core subunit, [RH, Score=636, Expect=0.0]} {Dmel: FBgn0052350, Vps11, Vacuolar protein sorting 11, [RH, Score=79.7, Expect=1e-14]} {Celegans: WBGene00011067, vps-11, Vacuolar protein sorting-associated protein 11 homolog, [RH, Score=273, Expect=1e-76]} {Smed: dd_Smed_v6_7053_0_1, dd_Smed_v6_7053_0_1, [RH, Score=187, Expect=6e-51]} {RNA1509_11437, RNA1509_41261} {RNA1310_3770.1, RNA1509_41261} {RNA1509_41261, RNA815_1127}
2. MligTC455_46658 239 4.97 Mlig455_029096

Neo: -

Age: Up-Down-Down

Region-enriched R5: 1.582/0.02641

 VPS11 5.794 0.944 0.994 1.000 0.977 0.892 0.987 Mlig455_029096 {REF} {Length: 2086} {Pfam: Zinc-finger [PF17122.7, score=21.2]; RING-type zinc-finger [PF13445.8, score=20.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=19.8]; Ring finger domain [PF13639.8, score=19.1]} {Human: ENSG00000280616, VPS11, VPS11, CORVET/HOPS core subunit, [Score=87.4, Expect=3e-19]; ENSG00000160695, VPS11, VPS11, CORVET/HOPS core subunit, [Score=87.4, Expect=3e-19]} {Mouse: ENSMUSG00000032127, Vps11, VPS11, CORVET/HOPS core subunit, [Score=87.0, Expect=3e-19]} {Dmel: FBgn0052350, Vps11, Vacuolar protein sorting 11, [Score=46.2, Expect=1e-05]} {Celegans: WBGene00011067, vps-11, Vacuolar protein sorting-associated protein 11 homolog, [Score=59.7, Expect=4e-10]} {Smed: dd_Smed_v6_6678_0_1, dd_Smed_v6_6678_0_1, [Score=64.7, Expect=5e-12]} {RNA1509_41261} {RNA1310_3770.1} {RNA815_1127}
3. MligTC455_28520 2013 41.93 Mlig455_052699

Neo: Neoblast

Age: Down-Down-Up

Region-enriched R4: 1.382/0.00004

 SEM1 2.417 0.760 - - 0.951 - 0.706 Mlig455_052699 {REF} {Length: 1402} {Pfam: DSS1/SEM1 family [PF05160.15, score=78.0]} {Human: ENSG00000127922, SEM1, SEM1, 26S proteasome complex subunit, [RH, Score=60.1, Expect=2e-12]} {Mouse: ENSMUSG00000042541, Sem1, SEM1, 26S proteasome complex subunit, [RH, Score=60.1, Expect=1e-12]} {Dmel: FBgn0266666, Sem1, Suppressor of exocyst mutations 1, [RH, Score=50.1, Expect=9e-09]} {Celegans: WBGene00022492, dss-1, Probable 26S proteasome complex subunit dss-1, [Score=48.9, Expect=2e-08]} {Smed: dd_Smed_v6_1550_0_1, dd_Smed_v6_1550_0_1, [RH, Score=72.4, Expect=1e-17]} {RNA1509_14991, RNA1509_48638} {RNA1310_33997.1, RNA1509_14991} {RNA1509_14991, RNA815_15780.3}
4. MligTC455_44730 249 5.19 Mlig455_056276

Neo: Int S/G2/M

Age: -

 CLCN3 1.683 - 0.733 - - - 0.950 Mlig455_056276 {REF} {Length: 9368} {TRANSSPLICED} {Pfam: Voltage gated chloride channel [PF00654.22, score=316.6]; Tetratricopeptide repeat [PF07719.19, score=27.2]; CBS domain [PF00571.30, score=23.2]; Tetratricopeptide repeat [PF00515.30, score=21.4]} {Human: ENSG00000109572, CLCN3, chloride voltage-gated channel 3, [Score=876, Expect=0.0]; ENSG00000073464, CLCN4, chloride voltage-gated channel 4, [Score=868, Expect=0.0]; ENSG00000171365, CLCN5, chloride voltage-gated channel 5, [Score=852, Expect=0.0]} {Mouse: ENSMUSG00000004319, Clcn3, chloride channel, voltage-sensitive 3, [Score=876, Expect=0.0]; ENSMUSG00000000605, Clcn4, chloride channel, voltage-sensitive 4, [Score=862, Expect=0.0]; ENSMUSG00000004317, Clcn5, chloride channel, voltage-sensitive 5, [Score=853, Expect=0.0]} {Dmel: FBgn0036566, ClC-c, Chloride channel-c, [RH, Score=868, Expect=0.0]} {Celegans: WBGene00000532, clh-5, Chloride channel protein, [RH, Score=737, Expect=0.0]} {Smed: dd_Smed_v6_4076_1_1, dd_Smed_v6_4076_1_1, [Score=781, Expect=0.0]} {RNA1509_12600, RNA1509_18041, RNA1509_30316} {RNA1310_3875, RNA1509_18041, RNA1509_30316} {RNA1509_18041, RNA1509_30316, RNA815_996.1}
5. MligTC455_20927 128 2.66 Mlig455_052078

Neo: -

Age: -

 0.97 - - - - - 0.970 Mlig455_052078 {REF} {Length: 666} {NoTransDecoderORF} {RNA1310_56856} {RNA815_15280}
6. MligTC455_42928 139 2.9 Mlig455_000600

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.462

 MPV17 0.97 - - - - - 0.970 Mlig455_000600 {REF} {Length: 1874} {TRANSSPLICED} {Pfam: Mpv17 / PMP22 family [PF04117.14, score=65.9]} {Human: ENSG00000115204, MPV17, MPV17, mitochondrial inner membrane protein, [RH, Score=120, Expect=3e-34]} {Mouse: ENSMUSG00000107283, Mpv17, MpV17 mitochondrial inner membrane protein, [RH, Score=123, Expect=2e-35]} {Dmel: FBgn0039930, CG11077, [RH, Score=74.7, Expect=9e-17]} {Celegans: WBGene00011826, T18D3.9, Mpv17-like protein, [RH, Score=83.2, Expect=5e-20]} {Smed: dd_Smed_v6_13953_0_1, dd_Smed_v6_13953_0_1, [RH, Score=127, Expect=5e-37]} {RNA1509_35894, RNA1509_57658} {RNA1310_33755.1, RNA1509_57658} {RNA1509_57658, RNA815_15799}
7. MligTC455_06819 39 0.81 Mlig455_021412

Neo: -

Age: -

Regeneration-enriched R2: 7.097
Regeneration-enriched TP: 6.558
Regeneration-enriched R5: 6.356
Regeneration-enriched R6: 4.969

 0.966 - - - - - 0.966 Mlig455_021412 {REF} {Length: 1104} {Dmel: FBgn0029807, CG3108, [Score=63.2, Expect=1e-11]} {RNA1310_50469}

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